New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6143421	196 (1.000)	5 (0.030)	5/276	NT	2.3%	coding (1179/3159 nt)	cusA	CzcA family RND family copper transporter
	?	NC_002947	= 6143463	221 (1.120)					coding (1221/3159 nt)	cusA	CzcA family RND family copper transporter
Rejected: Frequency below/above cutoff threshold.

GTGGCACCTGCGCTCGTCGCTGGTTGCAATCGTGTCATTGCCGGTGGGAGTACTGATCGCGCTCATCATCATGCGGCACCAGGGCATCAACGCCAACATCATGTCTCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6143313‑6143421 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGGCATCGACCATTGCGCCAATGGCG‑‑ATGG‑CGATGCCGCCCAGAGACATGATGTTGGCGTTGATGCCCTGGTGCCGCATGATGATGAGCGCGATCAGTACTCCCACCGGCAATGACACGATTGCAACCAGCGACGAGCG  <  NC_002947/6143463‑6143323                                                                                                                                                                                                                                                               GTGGCACCTGCGCTCGTCGCTGGTTGCAATCGTGTCATTGCCGGTGGGAGTACTGATCGCGCTCATCATCATGCGGCACCAGGGCATCAACGCCAACATCATGTCTCTGGGCGGCATCGACCATTGCGCCAATGGCG‑‑ATGG‑CGATGCCGC                                                                                                      <  1:461551/150‑1  TGGCACCTGCGCTCGTCGCTGGTTGCAATCGTGTCATTGCCGGTGGGAGTACTGATCGCGCTCATCATCATGCGGCACCAGGGCATCAACGCCAACATCATGTCTCTGAGCGGCATCGACCATTGCGCCAATGGCG‑‑ATGG‑CGATGCCGCC                                                                                                     <  1:4288899/150‑1     CACCTGCGCTCGTCGCTGGTTGCAATCGTGTCATTGCCGGTGGGAGTACTGATCGCGCTCATCATCATGCGGCACCAGGGCATCAACGCCAACATCATGTCTCTGAGCGGCATCGACCATTGCGCCAATGGCG‑‑ATGG‑CGATGCCGCCCAG                                                                                                  <  1:3205710/150‑1                                                                   CATCATGCGGCACCAGGGCATCAACGCCAACATCATGTCTCTGGGCGGCATCG‑CCAT‑‑CGCCATTGGCGCAATGGTCGATGCCGCTCAGAGACATGATGTTGGCGTTGATGCCCTGGTGCCGCATGATGATGAGCGCGATCAGTACTCCCA                                    >  2:283848/1‑150                                                                                                     ATGTCTCTGGGCGGCATCG‑CCAT‑‑CGCCATTGGCGCAATGGTCGATGCCGCTCAGAGACATGATGTTGGCGTTGATGCCCTGGTGCCGCATGATGATGAGCGCGATCAGTACTCCCACCGGCAATGACACGATTGCAACCAGCGACGAGCG  >  2:322459/1‑150                                                                                                                                                                                                                                                               GTGGCACCTGCGCTCGTCGCTGGTTGCAATCGTGTCATTGCCGGTGGGAGTACTGATCGCGCTCATCATCATGCGGCACCAGGGCATCAACGCCAACATCATGTCTCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6143313‑6143421 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGGCATCGACCATTGCGCCAATGGCG‑‑ATGG‑CGATGCCGCCCAGAGACATGATGTTGGCGTTGATGCCCTGGTGCCGCATGATGATGAGCGCGATCAGTACTCCCACCGGCAATGACACGATTGCAACCAGCGACGAGCG  <  NC_002947/6143463‑6143323

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.