| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1311713 = | 105 (0.530) | 11 (0.060) | 6/250 | NT | 11.0% | intergenic (‑175/+103) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA |
| ? | NC_002947 | 1311798 = | 82 (0.460) | intergenic (‑260/+18) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA | |||||
Only 100 of 168 total aligned reads displayed.
TCGTCTGCGCTACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCC > NC_002947/1311565‑1311861 | caagcggtcaacccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgccccttgt > 2:2719634‑M1/148‑150 (MQ=255) cGTCTGCGCTACAACCCGGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGTCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCtgt < 1:194654/150‑1 (MQ=255) gTCTGCGCTACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCtgtg > 2:2674559/1‑150 (MQ=255) gTCTGCGCTACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCtgtg < 2:2800009/150‑1 (MQ=255) aagcggtcaacccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgccccttgtg > 1:750124‑M1/147‑150 (MQ=255) aagcggtcaacccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgccccttgtg < 1:4017452‑M1/4‑1 (MQ=255) cTGCGCTACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTggg < 1:1371600/150‑1 (MQ=255) tGCGCTACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGa > 2:1737805/1‑150 (MQ=255) tGCGCTACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGa < 1:381837/150‑1 (MQ=255) tGCGCTACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGa < 1:3697077/150‑1 (MQ=255) cggtcaacccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGa > 1:3998155‑M1/144‑150 (MQ=255) gtcaacccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGc < 2:2773839‑M1/9‑1 (MQ=255) tcaacccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCg < 1:3231648‑M1/10‑1 (MQ=255) caacccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCgg > 1:3091941‑M1/140‑150 (MQ=255) caacccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCgg > 2:86109‑M1/140‑150 (MQ=255) tACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGG > 1:3580913‑M1/1‑150 (MQ=255) aacccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCggg < 2:396404‑M1/12‑1 (MQ=255) aacccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCggg > 1:1761148‑M1/139‑150 (MQ=255) acccaagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGc < 1:3211886‑M1/13‑1 (MQ=255) aCAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGc < 2:1890972/150‑1 (MQ=255) aaCCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa < 2:895493/150‑1 (MQ=255) cccTGTGCAGACTGTCCAGAGGCAGTATAGGACGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTAGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGc > 1:2175838/1‑150 (MQ=255) aagtgtgcgtgacagcgaaatcgacgccctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGggagcggggcctg > 1:3270715‑M1/134‑145 (MQ=255) ccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGACTAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGcc > 2:2753381/1‑150 (MQ=255) ccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGcc > 2:1719255/1‑150 (MQ=255) ccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGcc < 1:2350623/150‑1 (MQ=255) gCAGACTGTCCAGAGGCAGTATAGGAAGGGGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGa > 2:3325321/1‑150 (MQ=255) gCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCTCGCCcgctc < 2:2635617/150‑3 (MQ=255) cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGGCcccgcc > 1:4345927/1‑148 (MQ=255) cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGac > 2:3529059/1‑149 (MQ=255) cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGaa < 1:995454/150‑1 (MQ=255) aGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAg > 2:1011465/1‑150 (MQ=255) gACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGc < 1:1865947/150‑1 (MQ=255) gACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGc < 1:1765504/150‑1 (MQ=255) tGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATc > 2:4110065/1‑150 (MQ=255) ccAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAACCAACCAc > 2:2147449/1‑150 (MQ=255) cAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTGCTAACTCCACTCGCAGGGAGGACTCAATTTGGGGCCCGAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACt > 2:4442055/1‑150 (MQ=255) agagGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACATTGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTg < 2:3888608/150‑1 (MQ=255) agagGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGCAGCAAccccag > 1:4294917/1‑146 (MQ=255) gagGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGc < 2:2361993/150‑1 (MQ=255) ggCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGgcctgcgctagccagccaccagcac < 2:3182409‑M1/150‑26 (MQ=255) tataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGAt < 2:985430/150‑1 (MQ=255) tataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGAt < 1:524106/150‑1 (MQ=255) tataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGAt < 1:2880374/150‑1 (MQ=255) tataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGAGTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGAt < 2:3801400/150‑1 (MQ=255) ataGGAAGGAGTACTTAAGCCTTCCTGACGAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATg < 2:2574872/150‑1 (MQ=255) taGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGGCCGCGAAGCATCCACAGCGGGGGGTGc > 2:3178021/1‑150 (MQ=255) ggaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGCAGTGGATGctt < 1:3564469/150‑3 (MQ=255) gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCAc > 2:1487351/1‑150 (MQ=255) gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGCAGTGGATGcttc < 1:1416166/150‑4 (MQ=255) aggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATggccccc > 1:3005218/1‑144 (MQ=255) gaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGCAGTGGATGcttcgcgg < 2:2072902/150‑8 (MQ=255) gaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATGTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAACCATACACTGCGGTGGATGCCACCGGc > 2:2654302/1‑150 (MQ=255) tACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑ttt < 2:2850888/150‑1 (MQ=255) tAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGgcctgcgctagccagccaccagcacgcgaatggcttccaggcgcag < 2:3062116‑M1/150‑47 (MQ=255) aGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGgt < 1:2775973/150‑1 (MQ=255) tCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCATACACAGCGGTGGGAGCCACCCGC‑GTTTCCGGTGTTcg > 2:3426816/1‑150 (MQ=255) ggcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCACGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTcgc > 2:1105853‑M1/85‑150 (MQ=255) gcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTcgcg > 2:4071502‑M1/84‑150 (MQ=255) gcctggcaatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTcgcg > 2:2989202‑M1/84‑150 (MQ=255) cTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCAACCCCTGCGGGGGGTGCCACCGGC‑GTTGCCGGGGTTcgcg > 2:3211886/1‑150 (MQ=255) cTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGACCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACAATGCGGTGGCTGCCCCCCGG‑GTTGCCGGTGttaggg > 1:3757366/1‑146 (MQ=255) tGACTAATGGCACAATTATTTCTACTATTTGGTTATAACTCCAATCGCTGTGTGTAATAATTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCgg < 1:106799/150‑1 (MQ=38) tGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCgg < 2:3376387/150‑1 (MQ=255) aaaTGGCACAATGATTTCTACGCTTTGGTTATAACTCCAATCGCAGTGAGGAATAATTTTGGGGCCCTCATGCCTTCCTGTGGGAGCGGGCGCGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGt < 1:1036071/149‑1 (MQ=255) agggaacaATGTTTTCCACGATTTTGTAATACCTCCAATCGCAGTGAGCATTAAATTTGGGGCCCTACTGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGc < 1:3337332/145‑1 (MQ=25) aatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGc > 2:571515‑M1/77‑150 (MQ=255) aatgctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGc > 2:326566‑M1/77‑150 (MQ=255) gctggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccccTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCg > 2:2723169‑M1/74‑150 (MQ=255) gCAAAATTATTTCTACGATTTGGTTATAACTCCAATCGCTGTGTGTAATAATTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCg < 1:2540794/150‑1 (MQ=37) acaATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGGAGCAAACAAAGCCGTGGCTTACACCCGCGTTTGCCGG‑GTTCGCGGGCGTGccccca > 1:4043250/1‑147 (MQ=255) ggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTc > 1:4133165‑M1/71‑150 (MQ=255) ggagaaggccgccctgcgcctggaagccattcgcgtgctggtggctggctagcgcaggccccgcgcccctTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTc > 1:1489118‑M1/71‑150 (MQ=255) ttaTTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGTAATAAATTTGGGGCCCTACTGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTCCca < 1:1737513/148‑1 (MQ=255) tGATTTCTCCGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTGGGGGCCCTACGGCCTTCCTGTGGGCGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTCCca < 1:1734332/150‑1 (MQ=37) cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGgcctgcgctagccagccaccagcacgcgaatggcttccaggcgcagggcggccttctccagcattgccaggccatct > 1:2813631‑M1/1‑73 (MQ=255) cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCa > 2:1354263/1‑88 (MQ=255) tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGgcctgcgctagccagccaccagcacgcgaatggcttccaggcgcagggcggccttctccag < 2:425289‑M1/133‑62 (MQ=255) tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGgcctgcgctagccagccaccagcacgcgaatggcttccaggcgcagggcggccttctccag > 1:425289‑M1/1‑72 (MQ=255) tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAATCATACACAGCGGTGGATGCCACCGGC‑GTTGCCGGTGTTCGCGGGCGTGCCCCCTCCCACAAgggg > 2:4017452/1‑150 (MQ=38) tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGCAGCAACCACTGCCGTGGCTGCCACCCGC‑TTTGCCGGTGTTAGCGGGCGTGCCCGCGCCCACAAgggg > 2:4341906/1‑150 (MQ=38) ttATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGGGGCTGCCCCCGGC‑TTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACCAGGGGCGCGGGGccg > 2:2906951/1‑149 (MQ=38) gtctaccTCCAATCGCCGTGAGGCATACCTTGGGGGCCCTCATGCCGTCCGGGGGGAGCGGGCGAGCCCGCGACGCAGCCCCTGCGGTGGATGCCACCGGC‑TTGCCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCt < 2:2961976/144‑1 (MQ=21) tataACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGgcctgcgctagccagccaccagcacgcgaatggcttccaggcgcagggcggccttctccagcattgccaggccatcttcgcgccgcttg > 2:3594261‑M1/1‑61 (MQ=255) cTCCAATCGCAGTGAGGAATAATTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTa < 1:1825256/150‑1 (MQ=255) tCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAACCATCCCATGCGGTGGCTGCCACCCGC‑TTTTCCGGTGTTCGCGGGCGTGCCCGCACCCCCAACGGGCGCGGGGCCTGCGCAag > 2:3857926/1‑150 (MQ=37) cccAAGCGCCGTGAGTAATAATTTGGGGGCCCTAATCCCTTCCTGTGGGAGCGGGCGCGCCCGCGAAGCATCCACTGCGGTGGAGGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCAGGCCCCgcgcccc < 1:2518771/149‑4 (MQ=21) gTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGgcctgcgctagccagccaccagcacgcgaatggcttccaggcgcagggcggccttctccagcattgccaggccatcttcgcgccgcttgcgcagggcgtcgattt < 2:1299685‑M1/150‑106 (MQ=255) tGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGAATACACAGCGGGGGGTGCCACCCCC‑ATTGCCCGTGTTCGCGGGCGTGCCCGCTACCACAAAGGGCCCGGGGCCAGCGCGAGCCAGccaccaa > 2:637662/1‑149 (MQ=255) gAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGgcctgcgctagccagccaccagcacgcgaatggcttccaggcgcagggcggccttctccagcattgccaggccatcttcgcgccgcttgcgcagggcgtcgatttcg < 1:156104‑M1/150‑108 (MQ=255) gAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGCACCAACCAAAGCCGTGGGTTCCACCCGC‑GTTTCCCGTGTTGGCGGGCGTGCCCCCAACCCCAAAGGGCGCCGGGCCAGCCCGAGCcacccacccccacc > 2:52163/1‑144 (MQ=255) gAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAACCACCACAGCGCGGGGTGCCACCCGC‑ATTTCCGGGGGTGGCCGGCGGGCCCCCGCCCCCAAAGGGCGCCGGGCCCGCGCCAACCAcccccccccccc > 2:806323/1‑144 (MQ=255) aaTAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACACAGCGGTGGATGCCACCGGC‑TTTGCCCGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCAcgc > 2:3674636/1‑150 (MQ=255) aaTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAAt < 1:688471/150‑1 (MQ=255) gccttggTGTGGGAGCGGGCGCGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAgg > 1:3426816‑M1/8‑150 (MQ=255) gtcgTGTGGGCGCGGGCGCGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGGTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcg > 1:2406579‑M1/5‑150 (MQ=255) ttgtggGAGCGGGgcctgcgctagccagccaccagcacgcgaatggcttccaggcgcagggcggccttctccagcattgccaggccatcttcgcgccgcttgcgcagggcgtcgatttcgctgtcacgcacacttgggttgaccgcttgc > 2:3286426‑M1/2‑13 (MQ=255) ttgtggGAGCGGGgcctgcgctagccagccaccagcacgcgaatggcttccaggcgcagggcggccttctccagcattgccaggccatcttcgcgccgcttgcgcagggcgtcgatttcgctgtcacgcacacttgggttgaccgcttgc > 2:3286399‑M1/2‑13 (MQ=255) ttgtggGAGCGGGgcctgcgctagccagccaccagcacgcgaatggcttccaggcgcagggcggccttctccagcattgccaggccatcttcgcgccgcttgcgcagggcgtcgatttcgctgtcacgcacacttgggttgaccgcttgc > 2:2168072‑M1/2‑13 (MQ=255) cTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc < 2:261284/150‑1 (MQ=255) | TCGTCTGCGCTACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGC‑TTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCC > NC_002947/1311565‑1311861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |