BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1947843	67 (0.340)	10 (0.060)	6/224	NT	13.6%	intergenic (‑61/+109)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	= 1947910	73 (0.460)	10 (0.060)	6/224	NT	13.6%	intergenic (‑128/+42)	PP_1748/PP_1749	hypothetical protein/acetyltransferase

Only 100 of 132 total aligned reads displayed.

GTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAA  >  NC_002947/1947694‑1947992

gTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTGTGTGGCGAA                                                                                                                                                       >  2:3604604‑M1/1‑150 (MQ=255)

 tGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGaaa                                                                                                                                                      <  2:1196443/150‑1 (MQ=255)

 tGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGaaa                                                                                                                                                      <  2:295254/150‑1 (MQ=255)

 tGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGaaa                                                                                                                                                      <  1:682914/150‑1 (MQ=255)

  gAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAg                                                                                                                                                     <  2:1397879/150‑1 (MQ=255)

    aGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAggg                                                                                                                                                   <  2:4325906/150‑1 (MQ=255)

     gCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGc                                                                                                                                                  <  1:2291796/150‑1 (MQ=255)

     gCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTGTGTGGCGGAAGGGc                                                                                                                                                  >  1:4084359/1‑150 (MQ=255)

      ccGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGcc                                                                                                                                                 <  1:311867/150‑1 (MQ=255)

       cGGTGGGGCGGGGGATGGCGAGCAGTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtg                                                                                                                                                <  2:4477619‑M1/150‑8 (MQ=255)

        ggTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGc                                                                                                                                               <  2:2070342/150‑1 (MQ=255)

              gCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCg                                                                                                                                         <  1:2931277/150‑1 (MQ=255)

              gCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTGTGTGGCGGAAGGGGCGCCAAGCg                                                                                                                                         >  1:1843568/1‑150 (MQ=255)

                  gggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGccc                                                                                                                                     <  2:3059396/150‑1 (MQ=255)

                  gggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTAGCGGAAGGGCCGCAAAGCGGccc                                                                                                                                     >  2:1801784/1‑150 (MQ=255)

                  gggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTGGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGccc                                                                                                                                     <  2:3059397/150‑1 (MQ=255)

                     aTGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCgg                                                                                                                                  <  2:4466706/150‑1 (MQ=255)

                      tGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCTTTGCGGccctttc                                                                                                                                 <  2:2092909/150‑5 (MQ=255)

                       ggCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCTTTGCGGccctttcg                                                                                                                                <  2:778351/150‑6 (MQ=255)

                        gCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggt                                                                                                                               <  2:3795695‑M1/150‑25 (MQ=255)

                        gCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCaa                                                                                                                               >  1:3240988/1‑150 (MQ=255)

                          gAGCATTTCCAGCAGCACGCTTTTTAGATCGTCGATATGGGGTTGGGGGTGTGGTTCGGAAATGTCCTGGCCTCGGGTCGGTTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAATGGGCCGAAAAGCGGCCCCGGCAata                                                                                                                             <  1:1468377/150‑1 (MQ=25)

                          gAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAata                                                                                                                             >  2:1222839/1‑150 (MQ=255)

                          gAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTGTGTAGCGAAAGGGCCCCAAAGCGGCCCCCGCaaaa                                                                                                                             >  2:4315348/1‑148 (MQ=255)

                                     gcagcaCGCGTTTGAGATCGTCGAGATGGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGaa                                                                                                                  <  2:1293803/150‑1 (MQ=255)

                                     gcagcaCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCTGTCTTGTGGGAGCGGCCTTGTGTCGCTAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGaa                                                                                                                  <  2:1025447/150‑1 (MQ=255)

                                     gcagcaCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCTGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGaa                                                                                                                  <  2:1025588/150‑1 (MQ=255)

                                     gcagcaCGCGTTTGACATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGaa                                                                                                                  <  2:4392704/150‑1 (MQ=255)

                                        gcaCGGGTTTGAGATCGTCGAGTTCGGGTTCGGGGAGTCGTTCGGACAGGTCCTGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCt                                                                                                               <  2:2653094/150‑1 (MQ=38)

                                        gcaCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCt                                                                                                               <  2:2653105/150‑1 (MQ=255)

                                          aCGCGTTTGAGATCGTCGAGCTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGTTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTga                                                                                                             <  2:3080811/150‑1 (MQ=255)

                                          aCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCCAAGCGGCCCCCGCAATATAGGCACCGAAGCTga                                                                                                             >  2:2549582/1‑150 (MQ=255)

                                          aCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCATGTGTCGCGAAAGGGCCGCAAAGCCGCCCCCGCCATATCGGCACCCAAGCAga                                                                                                             >  2:2549583/1‑150 (MQ=38)

                                          aCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCGCCGGTCGGGTAAAAA‑TTTTGCAGTCGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTga                                                                                                             <  2:1193741/150‑1 (MQ=255)

                                                 tgagtgcgTCGTGAGCGGGTTCGGGGAGTCGTTCGGACTGGTCCTGGCCGCCGGTCGGGTTAAAT‑TTTTGCCGTCTTGTGGGAGCGGCCTGGTGTCGCGCACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTa                                                                                                      <  2:3356000/143‑1 (MQ=37)

                                                 tGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGAGGCCCCCGCAATATCGGCAGCGCAGCTGAGAcccca                                                                                                      >  2:3223526/1‑148 (MQ=255)

                                                 tGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTGTTTCGCGGAAGGGGCCCACACCCGCCCCCGCAAAAAAGGCAGCCAAGGAGAGAcccaa                                                                                                      >  2:1939680/1‑148 (MQ=255)

                                                     ttAGTCGAGTGGGGGTTCGGGGTGTCGTTCGGACTTGTCCCGGCCTCCGGT‑GGGTTAAAATTTTTGCAGTCTTGTGGGCGGGGCTTTGTGCCGCTAACGGGCCCAAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAgggg                                                                                                  <  1:4258915/149‑1 (MQ=255)

                                                         tggagtTCGGGTTCGGGGAGTGGTTCTGACATGTCCTGGCCTCCGGTCGGGTTAATA‑TTTTGCAGTCTTGTGGGAGCTTCATTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCt                                                                                              <  2:2179966/148‑1 (MQ=38)

                                                         tCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTGTGTCGCGGAAAGGCCGCCAACCCGCCCCCGCCAAAAAGGCAGCGAACCGGAGACCCAAGGGgggcg                                                                                              >  2:1907345/1‑149 (MQ=255)

                                                           gttttggggTTGGGGGAGTGTTTGGTACTTGTCCCGGCCTCGGGGGGGGTAAAAT‑TTTTGCCGTCTTGGGGGCGCGGCGTGGGGTCGCGAACGGGCCCAAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc                                                                                            <  1:407339/144‑1 (MQ=255)

                                                           gagaTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCATTTTTGGCCAAAGGGCCGCAAAGCGGCCCCCGCAATATACGCAGCGAAGCAGAGAACCAAGGGGCGCGTc                                                                                            >  2:343235/1‑150 (MQ=255)

                                                             gaTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGc                                                                                          <  2:3240988/150‑1 (MQ=255)

                                                              aTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCa                                                                                         <  2:3306880/150‑1 (MQ=255)

                                                               tCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAc                                                                                        <  2:3400836/150‑1 (MQ=255)

                                                                     tCGGGGAGTCGTTCGCACCTGACCAGGCCGCCGGTCGGGTTAAAA‑TTTGGCAGGCTTGGGGTCGCGGCCTGGTGTCGCTCACGGGCCGCACAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAtt                                                                                  >  1:1238703‑M2/1‑148 (MQ=255)

                                                                       ggggAGTCTTTCGGACATGTCCAGGCCTCCGGTCTTGTTAATA‑TTTTGCAGTCTTGTGGTAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcg                                                                                >  2:2881254‑M2/1‑146 (MQ=255)

                                                                        gggAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgc                                                                               <  1:1421364‑M1/150‑73 (MQ=255)

                                                                          gtgtcGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAT‑TTTTGCAGTCTTGTGGGAGCGGCTTTGTGTCGCGAAAGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcga                                                                             >  1:257679‑M2/3‑143 (MQ=255)

                                                                          gAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcga                                                                             <  2:293385‑M1/150‑75 (MQ=255)

                                                                          gAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcga                                                                             <  2:3654202‑M1/150‑75 (MQ=255)

                                                                             tCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacac                                                                          >  2:2997945‑M2/1‑140 (MQ=255)

                                                                             tCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacac                                                                          >  2:290121‑M2/1‑140 (MQ=255)

                                                                             tCGTTCGGACAGGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacac                                                                          >  2:173728‑M2/1‑140 (MQ=255)

                                                                              cGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacaca                                                                         >  2:362938‑M2/1‑139 (MQ=255)

                                                                              cGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacaca                                                                         >  2:2924454‑M2/1‑139 (MQ=255)

                                                                               gTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaa                                                                        <  2:3633811‑M1/150‑80 (MQ=255)

                                                                               gTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATc                                                                                                                           <  2:4240305/99‑1 (MQ=255)

                                                                               gTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaa                                                                        >  2:3177236‑M2/1‑138 (MQ=255)

                                                                                ttgggACAGGTCCCGGCCTCCGGTCGGTTTAAAT‑TTTTGCCTTCTTGGGGGCGGGGCCTTGTGTCGCGAACGGGCCCAAAAGCGCCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAg                                                                       <  1:1222839/147‑1 (MQ=255)

                                                                                  cGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggc                                                                     >  2:235382‑M2/1‑135 (MQ=255)

                                                                                   ggACTTGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggcc                                                                    >  2:3256307‑M2/1‑134 (MQ=255)

                                                                                      cATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgct                                                                 >  2:3648014‑M2/1‑131 (MQ=255)

                                                                                          tCCTGGCCTCGGGTGGGTTTAAAT‑TTTTGCTGTCTTGGGGGAGCGGCCTTGTGTCGCGAATGGGCCGCAACGCGGCCCCGGCATTATCGGCAGCGAAGCTGTGACCCTTGGGGCGCTTCGCACCCCATTCGCGACACACGGCCGCTCCca                                                             <  2:3716019/150‑1 (MQ=21)

                                                                                          tCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTTTGTCGCGAAATGGCCGCAAAGCGGCCCCGGCAATATAGGCAGCGAAGCTGAGACCCTAGGGGCGCGTCGCACCCCAatagcgacacaaggccgcaccca                                                             <  2:4054583‑M2/150‑24 (MQ=255)

                                                                                                     ggTGGGGTTAATA‑TTTTGCCGTCTTGTGGGCGCGGCGTTGTGTCGCGAATGGGCCGCAAAGGGCCCCCGGCAATATCGGCAGCGATGCTGTTACCCTCGGGGCGATTCGCACCCCATTCGCCACACAAGGCCGCTCCCACAAAAAGCCGa                                                  <  2:657402/150‑1 (MQ=25)

                                                                                                        gggtttAAAT‑TTTTGCTGTCTTGTGGGAGCGGCCTTGTGTCGCTAACGGGCCGAAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCACTCCCACAAAAAGCCGAGCa                                               <  1:3604604/146‑1 (MQ=25)

                                                                                                          ggTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCCGCCAACACGGCAGCGAAGCAGAGCCCCAAGGGGCGCTTCGCACCCCAATCGCGCCACAAGGCCGCTCCCACCAAAAGCCGAGcccg                                             >  2:4083182/1‑147 (MQ=25)

                                                                                                                         aGTCTTGTGGGAGCGGGCTTTTGTGGCGAAAGGGCCGCAAAGCGGCCCCGGCAAAAAAGGCCGCGCAGCGGGGACCCGAGGGGGGCGTCGCACCCCCGTCGCGCCACAAAGCCGCTCCCACAAAAAGCCCAGCAGTTGTCAGGCCAAcgg                               >  2:3459653/1‑150 (MQ=25)

                                                                                                                                tgGGTGCGGCCTTGTGTCGCTATtggggtgcgacgcgcccctagggtctcagcttcgctgcctatattgccggggccgctttgcggccatttcgcgacaaaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctgga                        <  2:4054583‑M1/150‑128 (MQ=255)

                                                                                                                                tgGGAGCGGCCGTTTGTCGCGGAATGGCCCCAAACCCGCCCCCGCAAAAAAGGCAGCGAAGCAGAGAACCTAGGGGCGCTTCGCACCCCAATAGCGAAAAAAGGCCCCACCCACAAAAAACCGAGCAGTTGTAAGGCCAAcggcccgcga                        >  2:661361/1‑148 (MQ=255)

                                                                                                                                    aGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATggg                    >  1:3924063/1‑150 (MQ=255)

                                                                                                                                    aGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCGATggg                    >  1:2932384/1‑150 (MQ=255)

                                                                                                                                      gggCCTTGTGTCGCGAACGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGa                  <  2:2507021/149‑1 (MQ=255)

                                                                                                                                       ggCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctaccacaagactgcaaaattttaacacgaccggaggcctggacatgtcc                 >  2:1031079‑M1/1‑16 (MQ=255)

                                                                                                                                        gCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccg                >  2:2507689‑M1/1‑15 (MQ=255)

                                                                                                                                        gCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGaaa                >  1:626456/1‑150 (MQ=255)

                                                                                                                                         ccTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAc               >  1:2570058/1‑150 (MQ=255)

                                                                                                                                          cTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaa              <  2:299725‑M2/150‑71 (MQ=255)

                                                                                                                                           ttGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaac             <  2:3633811‑M2/150‑72 (MQ=255)

                                                                                                                                            tgtgTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacg            >  2:2924454‑M1/1‑11 (MQ=255)

                                                                                                                                             gtgtCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacctgtccgaacga           >  2:173728‑M1/1‑10 (MQ=255)

                                                                                                                                             gtgtCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacga           >  2:2997945‑M1/1‑10 (MQ=255)

                                                                                                                                               gtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAgg         >  1:2223711/1‑150 (MQ=255)

                                                                                                                                               gtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAgg         >  2:2839309/1‑150 (MQ=255)

                                                                                                                                                tCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacacgacggcaaaattttaacccgaccggcggccgggacctgtccgaacgcctc        >  2:3925183‑M1/1‑7 (MQ=255)

                                                                                                                                                tCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgcgttgcggccctttcgcgacacaaagccgctcccacaagactgcaaaaatttaacccgaccggaggcctggacatgtccgaacgacac        >  1:257679‑M1/1‑7 (MQ=255)

                                                                                                                                                tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactc        <  2:3654202‑M2/150‑77 (MQ=255)

                                                                                                                                                tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactc        <  2:293385‑M2/150‑77 (MQ=255)

                                                                                                                                                tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactc        <  1:2669031‑M2/150‑77 (MQ=255)

                                                                                                                                                tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGACACAGCAGGt        >  1:1029218/1‑150 (MQ=255)

                                                                                                                                                tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt        >  2:1884625/1‑150 (MQ=255)

                                                                                                                                                  gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactccc      <  1:1421399‑M2/150‑79 (MQ=255)

                                                                                                                                                  gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactccc      <  1:1421364‑M2/150‑79 (MQ=255)

                                                                                                                                                  gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactccc      <  1:1421308‑M2/150‑79 (MQ=255)

                                                                                                                                                  gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCg      >  2:1195582/1‑150 (MQ=255)

                                                                                                                                                   cgAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctaccacaagactgcaaaatattaacaagaccggaggcctggacatgtccgaaagactcccc     >  2:2881254‑M1/1‑4 (MQ=255)

                                                                                                                                                    gAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGAt    >  1:616696/1‑150 (MQ=255)

                                                                                                                                                     aatggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctgtgcggcccgtgagcgacaccaggccgcgaccccaagcctgccaaattttaacccgaccggcggcctggtcaggtgcgaacgactccccga   >  1:1238703‑M1/1‑2 (MQ=255)

                                                                                                                                                      aaGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaa  >  1:1648922/1‑150 (MQ=255)

GTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAA  >  NC_002947/1947694‑1947992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.