| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2260037 | NA (NA) | 8 (0.040) | 4/268 | NT | NA | intergenic (+127/‑265) | PP_1990/asd | transposase/aspartate‑semialdehyde dehydrogenase |
| ? | NC_002947 | = 2260081 | NA (NA) | intergenic (+171/‑221) | PP_1990/asd | transposase/aspartate‑semialdehyde dehydrogenase | |||||
ACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAC > NC_002947/2259962‑2260186 | aCCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GC > 2:1956675‑M2/1‑150 (MQ=255) cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAA > 1:596899‑M2/1‑150 (MQ=255) cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAA > 1:597160‑M2/1‑150 (MQ=255) cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCACCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCGTGACGGGCAACCCAGCCCGGCACCAGCCTCC‑GCAA < 2:2471000‑M2/150‑1 (MQ=255) aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAG < 2:2538886‑M2/150‑1 (MQ=255) aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAG > 1:4124935‑M2/1‑150 (MQ=255) aaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAGGC > 2:402105‑M2/1‑150 (MQ=255) aaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑CCAAGGC < 2:2417367‑M2/150‑1 (MQ=255) cccTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCC‑GCAAGACCtgagtgaggggaccccggagcgtagcgtaggggccggatgaggggagc < 1:2886687‑M2/150‑49 (MQ=255) cACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCC‑GCAAGCCCtgagtgaggggaccccggagcgtagcgtaggggccggatgaggggagccgac < 2:512953‑M2/150‑53 (MQ=255) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATGCTGGGGCCTCAGCGCTTGAAGGGCATCCATGCCCGACACCTGCCTTC‑GCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggaggatgggagcgaagcg < 2:955956‑M2/150‑55 (MQ=255) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCTATGCCCGTCACCAGCCTTC‑GCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcg < 1:1326382‑M2/150‑55 (MQ=255) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTC‑GCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcg < 2:955932‑M2/150‑55 (MQ=255) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAGGCCtgagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcg < 2:164304‑M2/150‑55 (MQ=255) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAGGCCtgagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcg < 1:1359361‑M2/150‑55 (MQ=255) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAA < 1:3950236‑M2/92‑1 (MQ=255) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAA > 2:3950236‑M2/1‑92 (MQ=255) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCGGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAGGCCggagtgaggggaccccggcgcgcagcgcaggggccggatgatgggagcgcagcg < 2:1062576‑M2/150‑55 (MQ=255) cGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCCTCCATGCCCGTCACCTGCCTCC‑GCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgtt < 2:732865‑M2/150‑57 (MQ=255) cGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgccgcgtt < 2:623512‑M2/150‑57 (MQ=255) ggCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgaggggagcgcagcgttt < 2:2919084‑M2/150‑58 (MQ=255) ggCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCAACCGGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttt < 1:341823‑M2/150‑58 (MQ=255) ccGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCGGGAGCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttac < 2:3533195‑M2/150‑67 (MQ=255) cGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCCTCCATGCCCGTCACCTGCCTTC‑GCAAGGCCggagtgcggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactt < 2:1898018‑M2/150‑69 (MQ=255) ggCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATcaac < 2:723463/150‑1 (MQ=11) | ACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCC‑GCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAC > NC_002947/2259962‑2260186 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |