New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5818832 =73 (0.370)12 (0.070) 10/240 NT 14.3% intergenic (+40/+89) PP_5092/pilT NLP/P60 protein/twitching motility protein
?NC_002947 5818895 = 80 (0.470)intergenic (+103/+26) PP_5092/pilT NLP/P60 protein/twitching motility protein

Only 100 of 188 total aligned reads displayed.

CAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGC  >  NC_002947/5818684‑5818981
                                                                                                                                                    |                                                                                                                                                     
 tcgggaggggcggttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgcgc                                                                                                                                                     <  2:1065829‑M1/3‑1 (MQ=255)
 aaGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCTGGTACCGGCCCCTTCGCGGGCACGC                                                                                                                                                     <  1:3603357‑M1/150‑1 (MQ=255)
 aaGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCTGGTACCGGCCCCTTCGCGGGCACGC                                                                                                                                                     <  1:1326042‑M1/150‑1 (MQ=255)
   gggaggggcggttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGccc                                                                                                                                                   >  1:1339119‑M1/146‑150 (MQ=255)
   gggaggggcggttggcgcagtgggcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGccc                                                                                                                                                   >  2:1444166‑M1/146‑150 (MQ=255)
   gCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCC                                                                                                                                                   <  2:1837361‑M1/150‑1 (MQ=255)
   gCGGGTGAGTATCGACACCTTGAGCAAGCCTGACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCC                                                                                                                                                   <  2:2997038‑M1/150‑1 (MQ=255)
    ggtggggcggttggcgcagtggtcttcagtgctgccgggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCg                                                                                                                                                  >  1:4417910‑M1/145‑150 (MQ=255)
      ggTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCT                                                                                                                                                <  2:3819538‑M1/150‑1 (MQ=255)
       ggggcggtgggcgcagttgtcttccgcgttgccgggcggggcgggggcggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCGCTc                                                                                                                                               >  1:1837915‑M1/142‑150 (MQ=255)
       gTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTC                                                                                                                                               <  1:4247115‑M1/150‑1 (MQ=255)
        tGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCGTGCCCGCgaa                                                                                                                                              <  1:2501214‑M1/150‑4 (MQ=255)
        tGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCGCCCCCccacc                                                                                                                                              >  1:1237570‑M1/1‑145 (MQ=255)
        gggcggttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCGCTcc                                                                                                                                              <  2:2187164‑M1/10‑1 (MQ=255)
         ggcggttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCGCTccc                                                                                                                                             <  1:2136177‑M1/11‑1 (MQ=255)
            ggttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCGCTCCcaca                                                                                                                                          <  1:374437‑M1/14‑1 (MQ=255)
            ggttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggtggctcaccggcttggagtacctgcaaaggccctttcgcgggcgCGCCCGCTCCcaca                                                                                                                                          >  2:2655321‑M1/137‑150 (MQ=255)
             aTCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                         <  2:1734968‑M1/150‑1 (MQ=255)
             aTCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                         <  2:4326310‑M1/150‑1 (MQ=255)
             aTCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACA                                                                                                                                          <  2:263738‑M1/149‑1 (MQ=255)
              ttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCGCTCCCACAgg                                                                                                                                        <  1:540845‑M1/16‑1 (MQ=255)
              ttggcgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCGCTCCCACAgg                                                                                                                                        <  1:540837‑M1/16‑1 (MQ=255)
              tCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGG                                                                                                                                        >  2:625231‑M1/1‑150 (MQ=255)
                ggcgcagttgtcttcagtgatgcagggcggggcggcggaggggttgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCGCTCCCACAGGTa                                                                                                                                      >  2:1549684‑M1/133‑150 (MQ=255)
                  cgcagttgtcttcagtgatgcagggcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCCCTCCCACACGTAgc                                                                                                                                    <  2:4161901‑M1/20‑1 (MQ=255)
                    ccTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCCCAGGTAgcgc                                                                                                                                  >  1:1459479/1‑150 (MQ=255)
                    ccTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAgcgc                                                                                                                                  <  2:2476751/150‑1 (MQ=255)
                       tGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTc                                                                                                                               <  2:943631/150‑1 (MQ=255)
                        gAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCg                                                                                                                              <  1:4355930/150‑1 (MQ=255)
                             aGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCtctc                                                                                                                         >  2:1482282/1‑150 (MQ=255)
                                         aGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTca                                                                                                             <  2:2664971/150‑1 (MQ=255)
                                         aGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTca                                                                                                             <  2:2145997/150‑1 (MQ=255)
                                         aGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTca                                                                                                             <  1:2648724/150‑1 (MQ=255)
                                          gcggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcac                                                                                                            >  2:2136177‑M1/107‑150 (MQ=255)
                                           cggggcggcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccccttcgcgggcaCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcaca                                                                                                           >  1:1294603‑M1/106‑150 (MQ=255)
                                             gCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAta                                                                                                         >  1:2403177‑M2/1‑148 (MQ=255)
                                              cACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAtgtgagctgcgcgcgagagcgacgcgctac                                                                                                        <  2:119080‑M1/150‑31 (MQ=255)
                                              cACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtac                                                                                                        >  2:25646‑M2/1‑147 (MQ=255)
                                              cACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtac                                                                                                        >  1:2850672‑M2/1‑147 (MQ=255)
                                                cTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacct                                                                                                      >  1:2717383‑M2/1‑145 (MQ=255)
                                                  aCGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgt                                                                                                    >  2:2674192‑M2/1‑143 (MQ=255)
                                                   cggtggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcgCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgtg                                                                                                   >  2:1632387‑M1/98‑150 (MQ=255)
                                                   cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtg                                                                                                   >  2:1371388‑M2/1‑142 (MQ=255)
                                                   cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtg                                                                                                   >  1:2795649‑M2/1‑142 (MQ=255)
                                                   cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtg                                                                                                   >  2:2072152‑M2/1‑142 (MQ=255)
                                                   cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtg                                                                                                   >  1:2550052‑M2/1‑142 (MQ=255)
                                                   cGTGGTGGCCAAGCGGGTGCTGACGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtg                                                                                                   >  2:1994628‑M2/1‑142 (MQ=255)
                                                    gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAtgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                                  <  1:3673449‑M1/150‑37 (MQ=255)
                                                    gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAtgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                                  <  1:2874869‑M1/150‑37 (MQ=255)
                                                    gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAtgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                                  <  1:3486008‑M1/150‑37 (MQ=255)
                                                    gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgg                                                                                                  >  2:3943331‑M2/1‑141 (MQ=255)
                                                    gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgg                                                                                                  >  2:1704639‑M2/1‑141 (MQ=255)
                                                    gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCGTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgg                                                                                                  >  2:2705851‑M2/1‑141 (MQ=255)
                                                    ggggtggccACGCGGGGGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgg                                                                                                  >  1:2895456‑M2/3‑141 (MQ=255)
                                                    ggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaggccctttcgcgggcaCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                                  >  1:2914093‑M1/97‑150 (MQ=255)
                                                      ggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTACGCTGATCGGCGCTATCCGGTACCGGCCCCGTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtggga                                                                                                >  2:3442986‑M2/1‑139 (MQ=255)
                                                      ggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtggga                                                                                                >  2:3133944‑M2/1‑139 (MQ=255)
                                                      ggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAtgtgagctgcgcgcgagagcgacgcgctacctgtggga                                                                                                <  2:4225540‑M1/150‑39 (MQ=255)
                                                      ggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtggga                                                                                                >  1:825580‑M2/1‑139 (MQ=255)
                                                      ggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtggga                                                                                                >  2:64921‑M2/1‑139 (MQ=255)
                                                      ggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtggga                                                                                                >  1:2082038‑M2/1‑139 (MQ=255)
                                                        tggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAtgtgagctgcgcgcgagagcgacgcgctacctgtgggagc                                                                                              <  1:2161588‑M1/150‑41 (MQ=255)
                                                          gCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagcgg                                                                                            >  1:1138862‑M2/1‑135 (MQ=255)
                                                           ccAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagcggg                                                                                           >  2:2839812‑M2/1‑134 (MQ=255)
                                                           ccAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCGCCCACAGGTAGCGCGTCGCTCGCGCGCGCAGCTCACAtacctgtgggagcggg                                                                                           <  2:4001786‑M2/150‑17 (MQ=255)
                                                            cAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagcgggc                                                                                          >  1:2038335‑M2/1‑133 (MQ=255)
                                                              ctgacgatggtggggggtttgcggtggctgtgggtgcgtgggttgatcaaagggttgttgtacctgcaatggccctttcgcgggcgCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgcgc                                                                                        >  1:4161901‑M1/87‑150 (MQ=255)
                                                                  ggtggtGCCTAAATAGCAGCTGCTTAGTCTGGCCATGCGTTATGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGGGGGCGCGCCCGCTCCCACAGGTTtgtgcggtgcgcgcgagagcgacgcgctacctgtgggagcgggcgtgccc                                                                                    <  1:4273944‑M1/150‑51 (MQ=255)
                                                                       tgcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCGCCCCCAGGTAGCGCGTCGCGCGCGCGCGCCGCTCACCTACCGGGGGGAGCGGGCGCGCCcgcgca                                                                               >  2:540837/1‑148 (MQ=255)
                                                                         ccGATAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGGTATCGGGTACCGGCCCCTGCGCGGGCACGCCCGCTCCCACAGTTAGCGCGTCGCTCTCGCGCGCAGCTCCCCTCCCTGGGGGCGCGGGCGCGCCCGCGCAAg                                                                             <  2:3918124/150‑1 (MQ=255)
                                                                          cGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAgg                                                                            <  2:2159895/150‑1 (MQ=255)
                                                                           gAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCCCGCCCCCGCCCCCCCGGGGCGCGGGGCGCGCCCCCCCACCGCACCGCCCCGTGGGGGCGGGCGCGCCcgcccccggg                                                                           >  1:4327041/1‑143 (MQ=255)
                                                                           gAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACCCCCGCTCCCACCGGGAGCGCGTCGCGCGGGCGCGCCGCGCCCATACCGGTGGGAGCGGGCGCGCCCGCGAAAggg                                                                           >  2:2709678/1‑150 (MQ=255)
                                                                                    gcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACCCCCGCTCCCCCCGGGAGCGCGGCGCTCGCGCGCGCCGCGCACCTAACGGTGGGCGCGGGCGCGCCCGCGAAAGGGCCGTTGccg                                                                  >  2:460869/1‑148 (MQ=255)
                                                                                             tCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCGTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACaa                                                         <  2:3935925/150‑1 (MQ=255)
                                                                                                 gCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCGCCCACAGGTCGCGCGTCGCTCGCGCGCGCCGCTCACCAACCCGTGGGAGCGGGCGCGCCCCCGCAAGGGCCGTTGCAGGTACAACAAGccg                                                     >  2:3228439/1‑149 (MQ=255)
                                                                                                  ccAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTTGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCtt                                                    <  2:429817/150‑1 (MQ=255)
                                                                                                  ccAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCtt                                                    <  2:3517527/150‑1 (MQ=255)
                                                                                                   catgCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGGGTGCACGCCCGCTCCCACATGTATCGCGTCGCTCTGGCGGGCAGCTCACATAGATGTGGTTGCGGGCGCGCCCTCGAAAGGGCCTTTGCAGGTACTACAAGCCttt                                                   <  1:2602439/147‑1 (MQ=255)
                                                                                                   cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCttt                                                   <  1:2603678/150‑1 (MQ=255)
                                                                                                   cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCGCGCGCGCCGCTCACATACCGGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCttt                                                   >  2:4023692/1‑150 (MQ=255)
                                                                                                     aGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGa                                                 <  2:3233731/150‑1 (MQ=255)
                                                                                                     aGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCGTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGa                                                 <  2:1237573/150‑1 (MQ=255)
                                                                                                      gCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGAt                                                <  2:3754926/150‑1 (MQ=255)
                                                                                                           aaGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCCCCGGTAGCGCGTCGCTCGCGCGCGCAGCTCACATCCCGGGGGGCGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAAcc                                           <  1:100913/150‑1 (MQ=255)
                                                                                                               tGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCg                                       <  2:1826414/150‑1 (MQ=255)
                                                                                                                   cGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTcc                                   <  2:1786908/150‑1 (MQ=255)
                                                                                                                     gcgcTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCt                                 <  1:4031492/150‑1 (MQ=255)
                                                                                                                      cgcTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTc                                <  2:2898820/150‑1 (MQ=255)
                                                                                                                                  ccGGCCCCTTCGCGGGCACGCCCGCTCCCACTGGTAGCGCGTGGCTCTCGGGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAAc                    <  1:2627597/150‑1 (MQ=255)
                                                                                                                                  ccGGCCCCTTCGCGGGCACGCCCGCTCCCACCGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAAc                    <  1:1745581/150‑1 (MQ=255)
                                                                                                                                    ggCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGCAAGGGCCTTGGCAGGTACTACAAGCCTTTGCTCAACCCTCGCTCCCGCAGCCGCCGCAACGc                  >  2:4436274/1‑150 (MQ=38)
                                                                                                                                       cccTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGcccc               <  2:4356046/150‑1 (MQ=255)
                                                                                                                                          ttCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTc            <  2:4240643/150‑1 (MQ=255)
                                                                                                                                          ttCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCGCGCGCGCGCAGCTCACAAACCAGTGGGAGCGGGCGCGCCCCCCAAAGGGCCATTGCAGGTACAACAAGCCTTTGATAAACCCGCGCTCCCACAGCCACCCCAACGcccccac            >  1:4398198/1‑148 (MQ=255)
                                                                                                                                           tCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTcc           <  1:1040265/150‑1 (MQ=255)
                                                                                                                                              cgGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAAACCGGTGGGAGCGGGCGCGCCCGCGCAAGGGCCTTTGCAGGTACTACAAGCCGTTGATCAAACCACGCTCCCTCAGCCTCCGCAACCCCCCCGCCaac        >  1:3124277/1‑148 (MQ=38)
                                                                                                                                                  cACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCa    <  1:625231/150‑1 (MQ=255)
                                                                                                                                                    cGCCCGCTCCCCCTGTTTtttgagctgggcgcttccgccacgcgctacgtgtgggtgcgggcgtgcccgcgaaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgctt  <  1:367110‑M1/150‑133 (MQ=255)
                                                                                                                                                    cGCCCGCTCCCACCGGTCtgggagcggcgcgcgagagcgacgcgctacctgtgggagcgggcgtgcccgcgaaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgctt  <  2:374437‑M1/150‑133 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGC  >  NC_002947/5818684‑5818981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.