New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3953063	64 (0.320)	10 (0.060)	7/220	NT	14.9%	intergenic (‑61/+134)	PP_3486/PP_3487	cytochrome c/hypothetical protein
	?	NC_002947	= 3953123	63 (0.400)					intergenic (‑121/+74)	PP_3486/PP_3487	cytochrome c/hypothetical protein

AGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGG  >  NC_002947/3952974‑3953266                                                                                                                                                      |                                                                                                                                                agggccagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCt                                                                                                                                                 <  1:4120449/150‑1 (MQ=255)  gggCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTc                                                                                                                                                >  2:2273400‑M2/1‑149 (MQ=255)      cAGGGCTGAGGTCGAAGTTGCCATGCCACGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGAGGAGCGCGCAGCGCTcccct                                                                                                                                            >  2:186996‑M2/1‑145 (MQ=255)       aGGGCTGTGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttc                                                                                                                                           >  1:463675‑M2/1‑144 (MQ=255)        gggCTGCGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcg                                                                                                                                          >  2:1895481‑M2/1‑143 (MQ=255)        gggCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCTTATCGCATGCCCTGTGGGAGCGACCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcg                                                                                                                                          >  1:3664265‑M2/1‑143 (MQ=255)        gggCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGACCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcg                                                                                                                                          >  1:3664289‑M2/1‑143 (MQ=255)                gTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacggaa                                                                                                                                  <  2:3812200‑M2/150‑16 (MQ=255)                  cGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGGAACGGCTGCGCAGCAGCCCCGGCAGTGGCAGCGCAAGCGCAGAAAGGGGGGAGGGCTGCGCGCTccgtgcgcgacgccagg                                                                                                                                <  2:1796034‑M2/150‑18 (MQ=255)                   gAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcatttcgcgacgcaaggc                                                                                                                               >  2:4510741‑M2/1‑132 (MQ=255)                      gTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgc                                                                                                                            >  1:3370787‑M2/1‑129 (MQ=255)                           catgccaAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGTGCGTCGCGCAAGGGCGGCGCCGCCCCCCCCCCCCGGGGAGCCCCACCCCCCAAAGAGGGGGGCGCGGCCCGCGGCGGTCGCGGCGCCACGCCGCGcccc                                                                                                                       >  2:81862/1‑149 (MQ=255)                           catgccaAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGTGCGGCGCGCAAGGGCTGCGCACCAGCCCCCGCCGTGGCAGCGCAAGCGCCCAAAGAGGGGAGCGCAGCGCGCACCATTCGCGACGCCAGGCCCCAcccc                                                                                                                       >  2:3767765/1‑149 (MQ=255)                           catgccaAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGTGCGGCGCGCAAGGGCGGCGCCGCAGCCCCCGCCGTGGCCGCGCCAGCGCCCCACGAGGGGGGCGCTGCGCGCGCCATTCGCGGCGCCAGGCCGCGcccc                                                                                                                       >  2:3675242/1‑149 (MQ=255)                                 aaGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCGTGCCTCGGGCACAGGCGGGGCACCAGCCCCGCCAGAGGCAGCGCCAGCCCAGAAAGAAGGGGGCGCGGCGCGCGACGTGCCCGACCCAACGCCCCGCCCACacaaa                                                                                                                 >  2:2971204/1‑149 (MQ=255)                                                ccATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGCAAGGGCTGCGCCGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGCGCGCGGCGCGCTCCGTTTGCGACGCAAGGCCGCTCCCCCCAAAGCGGATGCCCCAGAgg                                                                                                  >  2:2532893/1‑150 (MQ=38)                                                           gCCTTGTGGGTGCGGCGTTGCGTGGGTAATGGGGTGCGCCGCACCCCGGGCCGGGGCCGCCAACGCGACCAACGTGGGGTGCGGTGGGCGCGCCTTGCGCGACGCATGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCa                                                                                       <  2:1372338/150‑1 (MQ=255)                                                                          ccTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCACGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATAc                                                                        >  2:3489797/1‑150 (MQ=255)                                                                           cTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCGACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACt                                                                       >  2:2090176/1‑150 (MQ=255)                                                                           cTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCTCAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACt                                                                       >  2:2767596/1‑150 (MQ=255)                                                                           cTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACt                                                                       >  2:2767506/1‑150 (MQ=255)                                                                           cTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACt                                                                       >  2:4358962/1‑150 (MQ=255)                                                                            ttGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTc                                                                      >  1:4022526/1‑150 (MQ=255)                                                                              gCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacct                                                                    <  2:1901634‑M2/150‑78 (MQ=255)                                                                                gTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctca                                                                  <  1:3683327‑M2/150‑80 (MQ=255)                                                                                   gcgAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagcc                                                               <  1:1718328‑M2/150‑83 (MQ=255)                                                                                   gcgAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagcc                                                               <  2:2864508‑M2/150‑83 (MQ=255)                                                                                   gcgAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCaccgacc                                                               >  1:3401010/1‑150 (MQ=255)                                                                                    cgAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccc                                                              <  1:419868‑M2/150‑84 (MQ=255)                                                                                    cgAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCaccgaccg                                                              >  1:3428247/1‑150 (MQ=255)                                                                                     gAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccct                                                             <  2:2610221‑M2/150‑85 (MQ=255)                                                                                     gAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCgg                                                             >  1:2815796/1‑150 (MQ=255)                                                                                     gAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCgg                                                             >  2:2645361/1‑150 (MQ=255)                                                                                      aaaGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGc                                                            >  2:207822/1‑150 (MQ=255)                                                                                       aaGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccg                                                                                                                             <  1:3987757‑M2/84‑21 (MQ=255)                                                                                       aaGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccg                                                                                                                             >  2:3987757‑M2/1‑64 (MQ=255)                                                                                        gggggggcgcCGCCGCCGGGGCTGGGGCACCACACGCGCAGACTGGGGGGTGGGCGGCGGGCGCTTTGGGCGCCGCAAGCCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCa                                                          <  2:3501110/144‑1 (MQ=255)                                                                                         gggCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccctggcc                                                         <  1:1533431‑M2/150‑89 (MQ=255)                                                                                         gggCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccctggcc                                                         <  1:953599‑M2/150‑89 (MQ=255)                                                                                         gggCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccctggcc                                                         <  1:953627‑M2/150‑89 (MQ=255)                                                                                         gggCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAg                                                         >  1:1159058/1‑150 (MQ=255)                                                                                          ggCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccctggccc                                                        <  1:3340846‑M2/150‑90 (MQ=255)                                                                                           gCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCg                                                       >  1:674677/1‑150 (MQ=255)                                                                                            cTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCgg                                                      >  1:2611732/1‑150 (MQ=255)                                                                                            cTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCgg                                                      >  1:353793/1‑150 (MQ=255)                                                                                             tGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGc                                                     >  1:1028402/1‑150 (MQ=255)                                                                                                gccgcagcCCCGGCTGTGGCCGCTCACGCGCATACTGTGGGGCGCGCTGCGCGCGCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTgg                                                  <  2:3314112/147‑1 (MQ=38)                                                                                                gccgcagcCCCGGCCGGGGCAGAGCCCGCGCAGAACGGGGGGAGCGCGGCGCGCTCCTTCCGCGCCGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTgg                                                  <  2:3333415/147‑1 (MQ=255)                                                                                                gcccccgcCCGGGCCGGGGCCGCTCACGGGCTGATTGGGGGGCGGGCTGCGCGCCGCTTGGGCGCCCCAGGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTgg                                                  <  2:61812/144‑1 (MQ=255)                                                                                                  agcagcCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGt                                                >  2:2884954/1‑150 (MQ=255)                                                                                                    cagcCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCa                                              >  1:3380309/1‑150 (MQ=255)                                                                                                    cagcCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCa                                              >  1:3380308/1‑150 (MQ=255)                                                                                                    cagcCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCa                                              >  1:49575/1‑150 (MQ=255)                                                                                                    cagcCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCCGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCa                                              >  1:2266541/1‑150 (MQ=255)                                                                                                     cgcCCCGGCCGTGGCAGCACACGCGCCCAATGTGGGGCGCGCGGGGGGCTCCTTTCGCGCCGCACGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCaa                                             <  1:2610878/149‑1 (MQ=255)                                                                                                     agcCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCaa                                             >  1:2170518/1‑150 (MQ=255)                                                                                                      gcCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAAc                                            >  1:1597022/1‑150 (MQ=255)                                                                                                      gcCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAAc                                            >  1:2294522/1‑150 (MQ=255)                                                                                                       ccccGGCTGGGGCAGCCCACGCGCCGACTGCGGGGCGCGGTGCGCGCTCCTTGCGCGCCGCACGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACa                                           <  2:4072800/150‑1 (MQ=255)                                                                                                         ccGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGc                                         >  1:2713837/1‑150 (MQ=255)                                                                                                         ccGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGc                                         >  1:2285669/1‑150 (MQ=255)                                                                                                         ccGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGc                                         >  1:4173030/1‑150 (MQ=255)                                                                                                          cGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCt                                        >  2:3394946/1‑150 (MQ=255)                                                                                                          cGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCt                                        >  2:1117391/1‑150 (MQ=255)                                                                                                          cGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCt                                        >  2:1117257/1‑150 (MQ=255)                                                                                                                  gCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATgcgc                                >  2:1279795/1‑150 (MQ=255)                                                                                                                  gCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATgcgc                                >  2:1796444/1‑150 (MQ=255)                                                                                                                  gCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATgcgc                                >  2:1279515/1‑150 (MQ=255)                                                                                                                  gCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATgcgc                                >  1:672279/1‑150 (MQ=255)                                                                                                                   cAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCt                               >  2:1633826/1‑150 (MQ=255)                                                                                                                     gCTCACGCGCAGAACGGGGGGCGCGCGGCGCGCGCCTTTCGCGACGAACGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTgg                             <  2:3582707/150‑1 (MQ=255)                                                                                                                     gCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTgg                             >  2:4078587/1‑150 (MQ=255)                                                                                                                      cTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTggg                            >  2:3049266/1‑150 (MQ=255)                                                                                                                       tCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGc                           >  2:945855/1‑150 (MQ=255)                                                                                                                         aaGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGcca                         >  2:4215676/1‑148 (MQ=255)                                                                                                                         aaGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCaa                         >  2:2974208/1‑150 (MQ=255)                                                                                                                         aaGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCaa                         >  2:2974182/1‑150 (MQ=255)                                                                                                                               cccaggcggggcgcggggcgcGCCCCTCGCGCCCCGCCCGCCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATcgccg                   <  1:3812200/143‑1 (MQ=255)                                                                                                                                 aaaGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCt                 >  1:1606322/1‑150 (MQ=255)                                                                                                                                    gaaaggAGCGCGCAGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGc              >  1:1859988/5‑150 (MQ=255)                                                                                                                                     agGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTACCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCg             >  1:3532664/1‑150 (MQ=255)                                                                                                                                       gggAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCCGCGGCTGGGTCAACAGCTGCATGCGCTGGGCCATCGCCGCTGGCGGt           >  1:4436231/1‑150 (MQ=255)                                                                                                                                       gggAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGt           >  1:4436268/1‑150 (MQ=255)                                                                                                                                       gggAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGt           >  1:4375377/1‑150 (MQ=255)                                                                                                                                         gAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGc         >  2:384228/1‑150 (MQ=255)                                                                                                                                          aGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCa        >  2:353037/1‑150 (MQ=255)                                                                                                                                            cgcTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATc      >  2:1011848/1‑150 (MQ=255)                                                                                                                                               tGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCgg   >  2:3470471/1‑150 (MQ=255)                                                                                                                                               tGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCgg   >  2:525036/1‑150 (MQ=255)                                                                                                                                                gcgcgcTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCggg  <  2:4025864/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                AGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGG  >  NC_002947/3952974‑3953266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.