| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,194,745 | T→A | 5.2% | intergenic (+156/‑46) | PP_4572 → / → PP_4573 | hypothetical protein/AAA family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,194,745 | 0 | T | A | 5.2% | 377.1 / 8.5 | 115 | intergenic (+156/‑46) | PP_4572/PP_4573 | hypothetical protein/AAA family ATPase |
| Reads supporting (aligned to +/- strand): ref base T (59/48); new base A (4/2); total (63/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.25e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
GTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGA > NC_002947/5194596‑5194891 | tGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTa > 2:2799112/1‑150 (MQ=255) gACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTAGTAGGCGCGGGTTTAc > 2:3878505/1‑150 (MQ=255) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTAccc < 1:2539830/150‑1 (MQ=255) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCGTATTAGGCGCGGGTTTAccc > 1:4016239/1‑150 (MQ=255) cGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGAGGGTAAACCCGCGCCTAATAAGTTTGTAGGGGCGGGTTTAccc < 2:1099902/150‑1 (MQ=37) ggggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTGTACCcg > 2:518387/1‑150 (MQ=255) ggggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCACCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCcg > 2:4145229/1‑150 (MQ=255) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAACTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCcgc < 2:2686689/150‑1 (MQ=255) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCcgc < 1:2412406/150‑1 (MQ=25) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCGTATTAGGCGCGGGGTTACCcgc > 2:477338/1‑150 (MQ=255) gggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGACCCTACAACCTTATTAGGCGCGGGTTTACCcgc < 2:689674/150‑1 (MQ=255) ggCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCcgcg > 2:1198287/1‑150 (MQ=255) gCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGa < 2:1348165/150‑1 (MQ=255) gCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTAAACCcgcgc < 2:1902017/150‑2 (MQ=255) gCAGTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGa < 2:3471069/150‑1 (MQ=255) cATTCAGGGACTGATTACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCTGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGaa < 2:1310961/150‑1 (MQ=255) cATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACACATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTGACCCGCGaa < 2:1244624/150‑1 (MQ=255) aGGGACTGAATACCCGGTCAGCCTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTACACCCGCCCCAACAACCGGCTTAGGCGCGGGGGTACCCGCGAAGAGGc > 2:3048550/1‑150 (MQ=255) gACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCg > 2:1081926/1‑150 (MQ=255) aCTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGc > 2:3018409/1‑150 (MQ=255) tGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCaa > 2:3161177/1‑150 (MQ=255) aaTACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAg > 1:3012707/1‑150 (MQ=255) tACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCTTTATAGTCGTAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTATTCGCGGGAAAACCCGCCCCTACAACCTTATGCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGcc < 1:3347635/150‑1 (MQ=39) tACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATTTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGcc < 2:1034802/150‑1 (MQ=255) tACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGcc < 2:2766933/150‑1 (MQ=255) cTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCGAAACag > 2:2938802/1‑150 (MQ=255) ggtttggCAGCCGCCCGGCCCCGCGTTATCGTCGTAAAAAAATCCCGATCATGTGCTGCCGGTTCGGGCCTCTTCGGGGGTAACCCCGCCCCTACACCCTTATTCGGCGGGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACagag < 1:2548159/144‑1 (MQ=255) gcttttGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCTTGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACagag < 1:4506560/147‑1 (MQ=255) gCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAAAAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGTTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACagag < 1:4083543/150‑1 (MQ=255) gTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTGTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGa < 2:4452228/150‑1 (MQ=255) gTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCGACAACCGGATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCCAAGCCCTAAACAGAGGa > 2:3842960/1‑150 (MQ=255) tttGCAGCCGCCAGGCCCCGCGTTCTAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCGACAACCTTGTTAGGCGCGGGGTTGCCCGGGGAGGGGCCCGCAAAGCCCTCAACAGAggcc > 1:1360185/1‑148 (MQ=255) cAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCGACAACCGTCTTAGGCGCGGGTTTACCCGCGAAGGGGCCCGCAAAGCCCTAAACAGAGGACAAAc > 1:4460006/1‑150 (MQ=255) aGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCGAAACAGAGGACAAAcc > 2:840656/1‑150 (MQ=255) aGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGGAAACCCGCCCCTCCAACCGGATGTGGGGCGGGTGTGGCCCCGCAGGGGCCCGCAAACCCCGATACACAggggcaaac > 1:751056/1‑143 (MQ=255) ccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGGGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAAcccc < 2:2423215/150‑1 (MQ=255) ccgccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAAcccc > 2:2410920/1‑150 (MQ=255) cgccTGGCCCCGCGTTATCGTCGGAAACAAATCCAGATCATGTGCTGCGTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAAccccc < 1:4131743/150‑1 (MQ=255) gccAGGCCCCGCGTTATTGTGGTAAAAAAATCCATATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGTTAAACCCGCCCATAAAACCTTTTTAGGGGCGGGTTTACCGGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCa < 1:678713/150‑1 (MQ=255) ccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCAt > 2:3247352/1‑150 (MQ=255) ccAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCAt > 2:3247372/1‑150 (MQ=255) gCCCCGCGTTATAGTCGGAAACAAAGCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGACGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAg < 2:1655461/150‑1 (MQ=255) cccGCTTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGtt < 2:2109564/150‑1 (MQ=255) ccGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTc < 2:115962/150‑1 (MQ=255) tCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCCCCCCGACAACCGTATTAGGCGCGGGGTTACCCGCGCAGTGGCCCGCAAAGCCCAAAAAAGAGGACAAACCCCCAAGAAGTTAGAAgagttcgg > 2:387068/1‑143 (MQ=255) cgtaaaCAAATCAATATCTTTTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCcgc < 2:1247201/147‑1 (MQ=38) aaCAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCGACAACCGTCTTAGGCGCGGGGTTACCCGCGGAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCAAGAAGGTCGAAGGCACCCGCGAcg > 2:768104/1‑149 (MQ=38) aaaTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCGTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACg > 2:2069733/1‑150 (MQ=255) atcattaTCTTGTGCTGCCTGTTGGGGCCTCTTCGCGGGTAAACCCGCCCATACAACATTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTc < 1:2879810/144‑1 (MQ=39) aTCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCTCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTc < 2:1898835/150‑1 (MQ=255) aGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCca > 2:3205456/1‑150 (MQ=255) aGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCca < 2:2445835/150‑1 (MQ=255) tgtgCTGCCTGTTCGGGCCTCTTCGCGGGTAAAACCGCCCCAACAACCTTATTAGGCGCGGGGTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGCCAAACCCCCATGAAGGTCGAAGGCACCCGCGACTACGTCGCCACCGATg > 1:2942700/1‑150 (MQ=255) gtgCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACACCCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGa < 2:4431255/150‑1 (MQ=255) gctgcCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCATACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAcc < 2:146269/150‑1 (MQ=255) ctgcCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTCATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCt > 1:3319169/1‑150 (MQ=255) ccTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCGACAACCGTATTAGGCGCGGGTTTACCCGCGCAGAGGCCCGCAAAGCCCTAAACCGAGGACAAACCCCCAGGAAGGTCGCAGGCCCCCGCGACTACGTCGCCCCAGATGACCTGaa > 2:615734/1‑150 (MQ=38) cTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGaaa < 2:545747/150‑1 (MQ=255) gTTGGGGCCTCTTGGGGGTTAAACCCGCCCCTACAACCTTATTCGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACt < 1:2172769/150‑1 (MQ=255) gggCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCg < 2:3803679/150‑1 (MQ=255) gggCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACAACGTCGCCACAGATGACCTGAAACTGGCg > 2:3549110/1‑150 (MQ=255) ttCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCg > 2:3640547/1‑120 (MQ=255) gcgGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCgg > 1:1306557/1‑150 (MQ=255) gcgGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCgg > 1:3875671/1‑150 (MQ=255) gggTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGcc > 1:308438/1‑150 (MQ=255) ggTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCa > 1:264004/1‑150 (MQ=255) aaCCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTAc > 2:3401510/1‑150 (MQ=255) aaCCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTAc < 2:2712494/150‑1 (MQ=255) aCCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTAcc > 1:386762/1‑150 (MQ=255) cccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTAccc < 1:1243934/150‑1 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 1:1850938/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 1:4289895/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 1:3645380/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 1:1273320/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 1:1273310/1‑150 (MQ=255) ccGCCCCTACAACCTTATTAGGCGCGGCTATACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCt > 2:282757/1‑150 (MQ=255) ccTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAAc < 2:4398666/150‑1 (MQ=255) tccAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGc < 2:3310805/148‑1 (MQ=255) aCAACCTTCTTCGGCGGGGGTTGCCCCGCGACGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGcc < 1:1217953/150‑1 (MQ=255) aaCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCg > 1:1852308/1‑150 (MQ=255) aaCCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCg > 1:1852167/1‑150 (MQ=255) aggttgtaGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCt > 1:1948047/7‑150 (MQ=255) ttattaGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGt > 1:4371129/1‑150 (MQ=255) tattaGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGtt < 2:4047256/150‑1 (MQ=255) attcGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTg < 1:466536/150‑1 (MQ=255) attaGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTg > 1:3656761/1‑150 (MQ=255) ctcttcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTgg > 1:1350834/6‑150 (MQ=255) tcttcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGt > 1:420640/5‑150 (MQ=255) ttcgcgGGTAAACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCa > 1:3558024/3‑150 (MQ=255) gcgcGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCaa < 1:3048550/150‑1 (MQ=255) gcgcGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCaa > 1:3839189/1‑150 (MQ=255) cgcgGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAg > 2:3945503/1‑150 (MQ=255) gcgGGTTTCCCCGCGACGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAgg < 1:477338/150‑1 (MQ=255) gcgGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAgg < 1:4145229/150‑1 (MQ=255) gcgGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAgg > 1:719509/1‑150 (MQ=255) gtggTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTGCGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAggg < 1:3842960/148‑1 (MQ=255) gTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCg > 1:2015661/1‑103 (MQ=255) gTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCg < 2:2015661/103‑1 (MQ=255) gTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGa > 1:852003/1‑150 (MQ=255) gTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGa > 1:851847/1‑150 (MQ=255) | GTGACGGGGCATTCAGGGACTGAATACCCGGTCTGCGTTTGCAGCCGCCAGGCCCCGCGTTATAGTCGGAAACAAATCCAGATCATGTGCTGCCTGTTCGGGCCTCTTCGCGGGTAAACCCGCCCCTACAACCTTATTAGGCGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGA > NC_002947/5194596‑5194891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |