| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,290,380 | T→A | 7.5% | intergenic (‑91/+93) | PP_4660 ← / ← mdaB | LysR family transcriptional regulator/drug activity modulator B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,290,380 | 0 | T | A | 7.5% | 452.8 / 20.8 | 148 | intergenic (‑91/+93) | PP_4660/mdaB | LysR family transcriptional regulator/drug activity modulator B |
| Reads supporting (aligned to +/- strand): ref base T (64/71); new base A (3/8); total (68/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.28e-01 | |||||||||||
Only 100 of 149 total aligned reads displayed.
ATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCG > NC_002947/5290231‑5290528 | aTCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATACCCGCTTGTCGAGGCCAAGGCCAGCGGCGCCTGTATGGGCCTCGTCGCGGGCTT < 2:450618‑M1/150‑1 (MQ=255) gaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGc > 1:1166036‑M1/128‑150 (MQ=255) gaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCGtgccccc < 1:2127008‑M1/23‑3 (MQ=255) gCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTC < 2:2858362‑M1/150‑1 (MQ=255) gCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTC < 1:2120360‑M1/150‑1 (MQ=255) gCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGAGCAAGGATTCGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCga < 2:4372530‑M1/150‑3 (MQ=255) gCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGAGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCga < 2:3583604‑M1/150‑3 (MQ=255) gCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGAGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCga < 2:4372706‑M1/150‑3 (MQ=255) ccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTc > 2:3903681‑M1/126‑150 (MQ=255) ccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTc < 2:784166‑M1/25‑1 (MQ=255) ccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTc > 2:1846592‑M1/126‑150 (MQ=255) ccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCAAGCCcgcga > 2:853724‑M1/126‑148 (MQ=255) cggcccgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCAAGCccgcgaa > 2:3303751‑M1/125‑147 (MQ=255) cAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCgaa < 2:1819449‑M1/150‑4 (MQ=255) cAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCgaa < 1:1333514‑M1/150‑4 (MQ=255) gcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCca > 2:423508‑M1/123‑150 (MQ=255) gcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCca > 2:2679201‑M1/123‑150 (MQ=255) gTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCgaaga < 2:1663580‑M1/150‑6 (MQ=255) ctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGGGTGGCCgcgcccccc < 1:982049‑M1/30‑4 (MQ=255) gATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACaa < 2:1387397/150‑1 (MQ=255) aTGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAg < 2:2662911/150‑1 (MQ=255) gACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTa < 2:475225/150‑1 (MQ=255) aCGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTAc < 1:543537/150‑1 (MQ=255) cGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACt < 2:1999053/150‑1 (MQ=255) cgacgaATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCa < 1:434580/150‑1 (MQ=255) gacgaATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCaa < 2:2334820/150‑1 (MQ=255) cTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCGCAACCACAACTACAGCAAAATCCATGa > 1:3366441/1‑150 (MQ=255) cTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGa > 2:3815593/1‑150 (MQ=255) cTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCATGCCCGCTCCCACAAGTACTGCAAAGTCCATGa > 2:290643/1‑150 (MQ=255) ggAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGaaa > 1:1793161/1‑150 (MQ=255) gTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCCCACCCACAAGTAATGCAAAGTCCTTGAAAccg > 1:1098658/1‑149 (MQ=255) tcttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGc < 1:729141/150‑1 (MQ=255) tcttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGc < 1:2165682/150‑1 (MQ=255) ttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGt > 2:1784903/1‑150 (MQ=255) ttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACATGCGt > 2:741092/1‑150 (MQ=255) cGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTaa < 1:2149304/150‑1 (MQ=255) cGGGTTTTCACATCAGTGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCt > 1:2913963‑M2/1‑149 (MQ=255) cGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCt > 1:2466490‑M2/1‑149 (MQ=255) gggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGGCCAGCGGCGCCTGTCTGGGCCTCTTCGCGGGCGTGCCCGCTCCCACAACTACATCCAAGTCCTGGTAACCGGCGTCATAccag > 2:1235900/1‑148 (MQ=255) ggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgt > 1:1082106‑M2/1‑147 (MQ=255) ggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgt > 2:2687945‑M2/1‑147 (MQ=255) gTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg > 2:437899‑M2/1‑146 (MQ=255) gTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg > 2:1808852‑M2/1‑146 (MQ=255) gTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGAGAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg > 1:3988875‑M2/1‑146 (MQ=255) ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgg > 2:2420696‑M2/1‑145 (MQ=255) ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgg > 1:851191‑M2/1‑145 (MQ=255) ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCagtgg > 1:3591882‑M2/1‑145 (MQ=255) ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTTCCCCCGCCCCCAACTACAGCAAAGTACGTGAAACCGGCGGAATAACagtgg < 1:3989597‑M2/150‑6 (MQ=255) cacaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGGGTTCCCGCGCCCCCAAGGACGGCCAAGTCCGTGAAAACTGCGGAATACCggtgggagc < 1:294249‑M2/150‑10 (MQ=255) acaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAggtattacgcaggtttcaaggactttgcagtacttgtgggagcg < 2:2179076‑M1/150‑45 (MQ=255) acaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAAACTGCGTAATACCggtgggggcg < 2:2091487‑M2/150‑11 (MQ=255) ccggcggcgttggtagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑Cgg > 1:4398308‑M1/76‑150 (MQ=255) ccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑Cgg > 2:1683001‑M1/76‑150 (MQ=255) ccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑Cgg > 1:830791‑M1/76‑150 (MQ=255) caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAggtattacgcaggtttcaaggactttgcagtacttgtgggagcgg < 1:1779042‑M1/150‑46 (MQ=255) caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgg > 1:585564‑M2/1‑139 (MQ=255) caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgg > 1:1424757‑M2/1‑139 (MQ=255) cggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑Cggg > 2:3596921‑M1/75‑150 (MQ=255) aTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGc > 1:80519/1‑112 (MQ=255) tCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGGTTGCCCGCTACCACAAGTACTGCAAAGTCCTTTTAAACTGGGTAATACCtgtgggtgcgggc < 2:3480756‑M2/150‑14 (MQ=255) tCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCGCTCCCACAACTACTGCAAAGTCCTTGAAACCTGCGGAATACCtgtgggagcgggc < 2:3879770‑M2/150‑14 (MQ=255) tCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAAAAACtgtgggagcgggc < 2:2127008‑M2/150‑14 (MQ=255) tCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACAGCACAGTCCTTGAAACCGGCGGAATACCagtgggagcgggc < 2:4194116‑M2/150‑14 (MQ=255) tCAGGGCCTGTGGTTGGTCTGTGCAAGGATGAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGTGGGCTTGCCCGCTCCCACAggtattacgcaggtttcaaggactttgcagtactcgtgggagcgggc < 2:4085034‑M1/150‑48 (MQ=255) cAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGGACTGCAAAGTCCATGAAACCTGCGTAATACCtgtgggagcgggcc < 2:253886‑M2/150‑15 (MQ=255) gCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcc > 1:2338747‑M2/1‑132 (MQ=255) gtCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGGGTGCCCCCGCCCCCCCAAACCGGCAAGTGCTTGAAACCGGCGGAATAACGG‑TGGGGG‑CGGGGCAGCCCCCGACGGGGc > 1:2816851/1‑150 (MQ=255) gtCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCGTTCCCCCGCCCACAACAAAAGCCAAAAACGTGAAAAAAGCCGAATAACAG‑GGGGTG‑CGGGCAAGCCCCCGAACAGGc > 1:4224629/1‑150 (MQ=255) gtCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTAAGGGCCTCTTCGCGGGCGTGCCCCCTCCCACCAGAAAGGCCAAATGCCTGAAAACCCCGGAATAACAG‑TGGGGGCCGGCCAAGCCC‑CGAATAGGc > 1:1404902/1‑150 (MQ=255) gCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGGTTGCCCGCTCGCACAATTAGTGGAAAGTGGTTTTAAACTGGGTAATTACTG‑GGGGAG‑GGGGGAAGGCCGGGAAGAGGGGGGTag > 2:2100908/1‑149 (MQ=255) cAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGGGTGCCCGCGCCCCCCAGGACGGCAAAGTCCATGGAAACCGCGGAATAACAG‑TGGGAG‑CGGGCCACCCCCCGGAGACGCCGGGAcc > 1:1346400/1‑149 (MQ=255) cAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCAAAAATACTGCAAAGTCCTTGAAACCTGCGGAATACCTG‑TGGGAG‑CGGGCAAACCCGCGAAGAGGCCGGTACa > 2:440587/1‑150 (MQ=255) cAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCGCCCCCCAGGACGGCCAACTCCGTGGAACCGGCGTAAAAACTG‑TGTGGG‑CCGGCCAGCCCCCCAAGAGGCCggggca > 1:2741862/1‑146 (MQ=255) ctgATTAGATCACCGCTTGTCTCGGCCACGGCCAGCGGCGCCTGTTTGGGCCTCTCGGGGGGCTTCCCGGCTCCCAAACTTACTGAAAAGTCCTTGAAACCTGC‑TAATTCCGGTTGGTTG‑CGGGAAAGCCCGCGAAGAGGCCGGTACAGa < 2:1662140/148‑1 (MQ=255) gtttAGATAACCGCTTGTCGAGGCCAAGTCCTGGGGCGCCTGTAGGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAATTACTGCAACGTCCTTTAAACCTGCTTAATACCTG‑TGGGAG‑CGGGCAAGTCCGCGAAGAGGCCGGTACAGACa < 2:605570/148‑1 (MQ=38) aaCCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCCCTCCCACAAGTAAAGCAAAATGCTTGAAAACAGCGTAATAACTG‑TGGGAG‑CGGGCAAGCCCGCGCAGAGGCCCGTAAAGACAAAAAATTa > 2:1243822/1‑150 (MQ=37) ccGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGGTTGCCCGCTCCCACATGTACTGCAACGTCCTTTAAACCTGCTTAATACCTG‑TTGGAG‑CGGGAAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACt < 2:4019465/150‑1 (MQ=38) ttGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCGACCACAAGTAATGGAAAGACCTTGAAAACATCGTAATTCCTG‑TGGGTG‑CGGGCCAGCCCGCGAAGAGGCCGGTAAAGACAAAAAAGTACAGTGc > 2:1195526/1‑150 (MQ=25) tGTCGAGGCCACGACAAGCGGGGCCTTTTTGGGCCTCTGCGCGGGCTTGCCCGCTCCCACATGTACTGAAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑GGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGcc < 2:3070531/150‑1 (MQ=37) tCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGTCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACCTAAAATTAATGTGCCtt > 2:612384/1‑150 (MQ=255) ccAACTCCAGCGGCGCCTGAATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGAACTCCAAACTCCTTGAAACCTGCGTAAAACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCaaa < 2:4124396/150‑1 (MQ=37) aaGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACATCAAAGTGCTTGTAAACCGCGTAAAACCTG‑TGGGCG‑CGGGGCAGCCCGCGAAGCGGCCGGTGCAGACATAAAAATACTGTGGCTTGCCCAaca > 2:3887090/1‑150 (MQ=25) cAGCGGCGCCTGTATGGGCATCTTCGCGGGCTTGCCCGCTCCCACCAGTACTGCAACGTCCTTGAAACCTGCGTAATACCTG‑TGGTAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTg < 2:2174019/150‑1 (MQ=255) aGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCCCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGGAAAACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAAATACTGTGCCGTGCCAAACACCTTGt > 2:1101353/1‑150 (MQ=37) gcggcgCCTGTATGGGCCTCTTGGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTc < 2:3179174/150‑1 (MQ=255) gcggcgCCTGTATGGGCCTCTTGGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTc < 2:3179066/150‑1 (MQ=255) cTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGTAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATgg < 2:3698332/150‑1 (MQ=255) tGTATGGGCCTCTTCGCGGGCTTGCCCCCTCCCACAAGTACTGCAAACTACTTGAAACCAGCGGAAAACCGG‑TGGGAG‑CGGGCAAGCCCCCGAAGAGGCCGGTACAGACATAAAAATAATGTGCCATTCCAAACACCTTGTCCAGATtgg > 2:261467/1‑150 (MQ=25) gggCCTCTTCGCGGGCGTGCCCCCACCCACAACAACAGCAAACTCCGAGAAAACGGCCTAAAACCAG‑TGGGAG‑CGGGCAACCCCCCGAAGAGGCCGGTACAGACATAAAAATACAGAGCCATGCCAAACACCATGTCCCGATGGGCCTCa > 2:243135/1‑150 (MQ=255) CCTCTTCGCGGGCTGGCCCGCTCCCACACGTACTGCAACGTCCTTGAAACCGGCGTAATACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATaa > 2:3366441‑M1/1‑150 (MQ=255) tctTCGCGGGCTTGCCCGCTCCCACAggtattacgccgggttcaaggactttgcagtacttgtgggagcgggcaagcccgcggagaggcccatacaggcgccgctggacttggccgcgaccagcgggtctctaatccttgcacagaccaa > 2:4248496‑M1/1‑26 (MQ=255) tctTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcccgcgaagaggcccatacaggcgccgctggacttggcctcgacaagcggttatctaatccgtgcacagaccaa < 2:4444493‑M2/150‑91 (MQ=255) CTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTcataatct < 2:3057280‑M1/150‑4 (MQ=255) TTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGCGCCTTGCCAAACACCTTGTCCAGATGGGCCGCATAAGCTg < 2:2509481‑M1/150‑1 (MQ=255) TCGCGGGCTTGCCCGCTCCAACAAGTACTCCAATGTCCTTGAACCCGGCTTAATACCTG‑TGGTAG‑CGGGCACGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTAGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGc > 2:531599‑M1/1‑150 (MQ=255) cgGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg > 1:1634769‑M2/1‑54 (MQ=255) cgGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg > 1:1634764‑M2/1‑54 (MQ=255) cgGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtg < 2:1634769‑M2/58‑5 (MQ=255) gCTTGCCCGCTCCCACAggtattacgcaggtttcaaggactttgcagtacttgtgggagggggcaagcccgcgaagaggcccatacaggcgccgctggacttggcctcgacaagcggttatctaatccttgcacagaccaaccacaggcc < 2:982049‑M1/150‑134 (MQ=255) TTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAAcgccg < 1:592017‑M1/150‑1 (MQ=255) | ATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTG‑TGGGAG‑CGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCG > NC_002947/5290231‑5290528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |