BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,291,560	G→C	5.0%	L246V (CTC→GTC) ‡	PP_4663 ←	transmembrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,291,560	0	G	C	5.0%	760.0 / 21.9	219	L246V (CTC→GTC) ‡	PP_4663	transmembrane protein
Reads supporting (aligned to +/- strand): ref base G (113/95); new base C (7/4); total (120/99)
Fisher's exact test for biased strand distribution p-value = 7.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 225 total aligned reads displayed.

AGGCCGCGCTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAGGCATCCTGC  >  NC_002947/5291411‑5291705

aGGCCGCGCTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAg                                                                                                                                                   <  1:2427300/150‑1 (MQ=255)

 ggCCGCGCTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAgg                                                                                                                                                  <  1:871788/150‑1 (MQ=255)

    cgcgCTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGggcg                                                                                                                                               <  2:533470/150‑1 (MQ=255)

     gcgcTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGggcgg                                                                                                                                              >  2:1508370/1‑150 (MQ=255)

       gcTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGcc                                                                                                                                            <  1:3533517/150‑1 (MQ=255)

       gcTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGcc                                                                                                                                            <  1:566054/150‑1 (MQ=255)

         tGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCCTCGGCGGCCac                                                                                                                                          >  2:4129708/1‑149 (MQ=255)

         tGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCCTCGGCGGCCac                                                                                                                                          <  2:663190/150‑2 (MQ=255)

           gACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGc                                                                                                                                        <  2:3784728/150‑1 (MQ=255)

           gACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGc                                                                                                                                        <  2:872329/150‑1 (MQ=255)

           gACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCCTCGGCGGCCacct                                                                                                                                        <  1:4129708/150‑4 (MQ=255)

             cGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCg                                                                                                                                      >  1:3985673/1‑150 (MQ=255)

              gTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGa                                                                                                                                     >  2:4206456/1‑150 (MQ=255)

                    tCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGaaaa                                                                                                                               >  2:3315497/1‑150 (MQ=255)

                    tCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGaaaa                                                                                                                               >  2:3482542/1‑150 (MQ=255)

                     cGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGaaaaa                                                                                                                              <  2:3609788/150‑1 (MQ=255)

                     cGGCCCTTCCGCACAGGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCAAGGCCGATGaaaaa                                                                                                                              <  1:1323036/150‑1 (MQ=255)

                      ggCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAg                                                                                                                             >  2:744485/1‑150 (MQ=255)

                         ccgtCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCaa                                                                                                                          <  2:4444231/147‑1 (MQ=255)

                          cTTCCGCACTTGGCCGCCTTCTCCCAAAAGCGCATGGACTACGTGGCGCGCGTTTTCGTTAACCCGGGGGTCGACCTGCTCAGCGCTTCGCCCGCTACCCGTTGATCAGCCGGTGGCCGCCGCGGGCGGCCAGGCCGATGAAAAAGCAAc                                                                                                                         <  1:3247982/150‑1 (MQ=255)

                           ttCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACg                                                                                                                        >  2:2626017/1‑150 (MQ=255)

                                 acaTGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGaa                                                                                                                  <  2:3004960/150‑1 (MQ=255)

                                     ggCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAAcagc                                                                                                              >  2:2871317/1‑150 (MQ=255)

                                      gccgccTTCTTCTAAAAGCGCATGGACTACCTGGAGCGCTATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAAcagca                                                                                                             <  2:4184357/150‑1 (MQ=255)

                                      gccgccTTCTTCGAAAAGCGCTTGGACTACCTGGAGCGCGATTTCGATATCCAGGGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAAcagca                                                                                                             <  1:4082829/150‑1 (MQ=255)

                                       ccgccTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAAcagcag                                                                                                            >  1:1759640/1‑150 (MQ=255)

                                       ccgccTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAAcagcag                                                                                                            >  1:3844595/1‑150 (MQ=255)

                                        cgccTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCTTTTTCGATATCCAGCGGGTCGACTTGCTCAGCGCTTCGTCCGATAACCGTTGATCAGCAGGTGGCCGCCGCGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACagcagc                                                                                                           <  1:4017574/150‑1 (MQ=255)

                                        cgccTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACagcagc                                                                                                           >  2:1573534/1‑150 (MQ=255)

                                           cttcttCGAAACGCGCATGGACTACCTGGAGCGCGATTTCGATTTCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAgcgcg                                                                                                        <  2:619579/150‑1 (MQ=255)

                                           cttcttCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAgcgcg                                                                                                        >  2:3394690/1‑150 (MQ=255)

                                            ttcttcGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAgcgcgc                                                                                                       >  2:2515330/1‑150 (MQ=255)

                                             tcttcGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCt                                                                                                      >  2:1739012/1‑150 (MQ=255)

                                             tcttcGAAAAGCGCAGGGACTACCGGGAGCGCGATTTCGATATCCCGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGCGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCt                                                                                                      <  2:4296160/150‑1 (MQ=255)

                                               ttcGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGa                                                                                                    >  1:1887051/1‑150 (MQ=255)

                                                tcGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTGAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGAt                                                                                                   >  1:3746358/1‑150 (MQ=255)

                                                     aaGCGACTGGACTCCGTGGTGCGCTTTTTCGATATCCCGGGGGTCGACATGCTCCGCGCTTGGGCCGCTACCCGTGGATCAGCTGGGGGCCGCCGCGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCt                                                                                              <  1:2674420/150‑1 (MQ=255)

                                                          cATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCCGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGc                                                                                         >  1:2861902/1‑150 (MQ=255)

                                                          cATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGc                                                                                         >  2:1049005/1‑150 (MQ=255)

                                                             ggACTACCTGGTGCGCTATTTCGATATCCCGCGGGTCTACATGCTCAGCGCTTCGTCCGCTAACCGTTGAACCGCCGGTGGCCGCCGCGGGGGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGc                                                                                      <  1:3087017/150‑1 (MQ=255)

                                                                 tACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACt                                                                                  >  2:3068252/1‑150 (MQ=255)

                                                                  aCCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTg                                                                                 <  1:1839858/150‑1 (MQ=255)

                                                                   ccTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTgg                                                                                >  2:3187704/1‑150 (MQ=255)

                                                                    cTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGc                                                                               >  2:1602835/1‑150 (MQ=255)

                                                                     tGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCAACTCGcc                                                                              >  1:3452104/1‑150 (MQ=255)

                                                                          cgcgATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCa                                                                         >  1:3607138/1‑150 (MQ=255)

                                                                            cgATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGACAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGc                                                                       >  2:3076218/1‑150 (MQ=255)

                                                                            cgATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGc                                                                       >  2:806867/1‑150 (MQ=255)

                                                                               tttCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATg                                                                    >  1:2750056/1‑150 (MQ=255)

                                                                                ttCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGc                                                                   >  2:4122692/1‑150 (MQ=255)

                                                                                  cGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCa                                                                                                                                           <  1:1583187/76‑1 (MQ=255)

                                                                                  cGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCGGccttgct                                                                 <  2:2698326/150‑7 (MQ=255)

                                                                                  cGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCg                                                                 >  1:231558/1‑150 (MQ=255)

                                                                                  cGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCg                                                                 >  1:2516781/1‑150 (MQ=255)

                                                                                   tatatCCCGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCCGCTGGTGGCCGCCGCGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGa                                                                <  1:3839116/149‑1 (MQ=255)

                                                                                   gATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCTGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGa                                                                <  1:3345488/150‑1 (MQ=255)

                                                                                   gATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGa                                                                >  2:3738813/1‑150 (MQ=255)

                                                                                   gATATCCAGCGGGTCGACATGCTCAGCGCTCCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGa                                                                <  2:1290978/150‑1 (MQ=255)

                                                                                     tatCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGc                                                              <  1:4110636/150‑1 (MQ=255)

                                                                                       cccAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCCGCTGGTGGCCGCCGCGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCaa                                                            <  1:668278/149‑1 (MQ=255)

                                                                                          aGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGc                                                         >  2:2808319/1‑150 (MQ=255)

                                                                                               gTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGgcg                                                    >  2:1820578/1‑150 (MQ=255)

                                                                                                  gACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCa                                                 <  2:1581775/150‑1 (MQ=255)

                                                                                                  gACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCa                                                 <  2:2606279/150‑1 (MQ=255)

                                                                                                   aCATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAg                                                >  1:1634586/1‑150 (MQ=255)

                                                                                                   aCATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAg                                                >  1:1634774/1‑150 (MQ=255)

                                                                                                   aCATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAg                                                >  1:142459/1‑150 (MQ=255)

                                                                                                   aCATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAg                                                <  2:241517/150‑1 (MQ=255)

                                                                                                      tGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTAGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCAt                                             >  2:2583984/1‑150 (MQ=255)

                                                                                                         tCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCCGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATcag                                          >  1:3173533/1‑150 (MQ=255)

                                                                                                         tCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATcag                                          >  1:164684/1‑150 (MQ=255)

                                                                                                         tCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATcag                                          >  1:164520/1‑150 (MQ=255)

                                                                                                           aGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATcagca                                        >  2:2372267/1‑150 (MQ=255)

                                                                                                            gcgcTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGCGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATcagcag                                       <  2:1118624/150‑1 (MQ=255)

                                                                                                            gcgcTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATcagcag                                       <  1:369123/150‑1 (MQ=255)

                                                                                                             cgcTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCagcagc                                      >  1:1923962/1‑150 (MQ=255)

                                                                                                             cgcTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCagcagc                                      >  2:1268758/1‑150 (MQ=255)

                                                                                                             cgcTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCagcagc                                      <  1:3315497/150‑1 (MQ=255)

                                                                                                                   gTCCGCTACCCGTGGATCCGCCGGGGGCCGCCGGGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGcc                                <  1:2002157/150‑1 (MQ=255)

                                                                                                                    tCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGccc                               >  2:2034598/1‑150 (MQ=255)

                                                                                                                    tCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGccc                               >  1:1018337/1‑150 (MQ=255)

                                                                                                                     ccGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGcccc                              <  1:1054318/150‑1 (MQ=255)

                                                                                                                         tAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAgc                          <  1:4206456/150‑1 (MQ=255)

                                                                                                                         tAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAgc                          >  2:559009/1‑150 (MQ=255)

                                                                                                                          aaCCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAgcg                         <  1:4510358/150‑1 (MQ=255)

                                                                                                                                 gATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGcc                  <  2:48099/150‑1 (MQ=255)

                                                                                                                                   tCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCAc                >  1:2143559/1‑150 (MQ=255)

                                                                                                                                   tCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCAc                >  2:4329106/1‑150 (MQ=255)

                                                                                                                                    cagcagGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCAcc               <  2:623190/150‑1 (MQ=255)

                                                                                                                                      gcagGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCa             >  2:3128328/1‑150 (MQ=255)

                                                                                                                                      gcagGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAAAGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCa             >  1:2696444/1‑150 (MQ=255)

                                                                                                                                       gagGTGGCCGCCGAGGGGGGCCAGGCCGATGAAAAAGCAACTCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGTCCGTCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCaa            <  2:1925078/149‑1 (MQ=255)

                                                                                                                                       ccggTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCaa            <  1:3096900/148‑1 (MQ=255)

                                                                                                                                        gcctGGCCGCCCTCGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAg           >  2:3580245/4‑150 (MQ=255)

                                                                                                                                           tGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAGGCa        >  2:3464110/1‑150 (MQ=255)

                                                                                                                                           tGGCCGCCCTCGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAGGCa        >  2:3049086/1‑150 (MQ=255)

                                                                                                                                            ggCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAGGCAt       >  2:2126128/1‑150 (MQ=255)

                                                                                                                                             gccgccGCGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAGGCATc      <  2:1171299/150‑1 (MQ=255)

                                                                                                                                              ccgccgAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAGGCATcc     <  2:3166916/150‑1 (MQ=255)

                                                                                                                                                gccgAGGGCGGCCAGGCCGAGGGAAAAGCAACGCGTGAACAGCGGCGCGCTGATCCGCTGGCGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCGTCAGCGGCGACGCCCCCAGCGCCTCGCCACCCGCGGCATCCTg   >  2:1458138/1‑150 (MQ=255)

AGGCCGCGCTGGACGTGCACTCGGCCCTTCCGCACATGGCCGCCTTCTTCGAAAAGCGCATGGACTACCTGGAGCGCGATTTCGATATCCAGCGGGTCGACATGCTCAGCGCTTCGTCCGCTAACCGTTGATCAGCAGGTGGCCGCCGAGGGCGGCCAGGCCGATGAAAAAGCAACGCTTGAACAGCAGCGCGCTGATCCGCTGACGCAGCCACTGGCCCGCCAGCATGCCGAGCAAGGCCGGCGCCAGCATCAGCAGCGACGCCCCCAGCGCCTGGCCACCCAAGGCATCCTGC  >  NC_002947/5291411‑5291705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`