| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,335,236 | A→G | 8.6% | intergenic (+98/‑145) | gluQ → / → PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,335,236 | 0 | A | G | 8.6% | 561.2 / 30.1 | 187 | intergenic (+98/‑145) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (72/97); new base G (4/12); total (77/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.64e-01 | |||||||||||
Only 100 of 193 total aligned reads displayed.
GCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGAGGCCAGCATGTA > NC_002947/5335087‑5335385 | gcCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCCCGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGaaa < 1:4484637/150‑1 (MQ=255)gcCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGaaa < 1:555075/150‑1 (MQ=255)gcCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGaaa < 1:4484306/150‑1 (MQ=255) cGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGg < 2:3347270‑M2/150‑2 (MQ=255) cGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGg > 2:2310083‑M2/1‑149 (MQ=255) ggAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGAACCACGCCGCCTTCAAGGCCGGTGGGCTACCGGTGGGAGCGGGCAGGCCCGCGCAAGgg < 1:3641706‑M2/150‑3 (MQ=255) gAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCGGTGGGAGCGGGCATGCCCGCGAACGggc < 2:1589061‑M2/150‑4 (MQ=255) aGCGATCGCGCAGCGGACCACGGGGCCAGTGGCTGATTTGCGCTGAACCTTTCCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGggccg > 1:2321075‑M2/1‑145 (MQ=255) gATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCCCCGTCAAGGCCTGTGGGCTACCTGTGGGGGCGGGCCAGCCCGCGAAAGggcccgcc < 1:2676078‑M2/150‑9 (MQ=255) gATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTGTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGca < 2:3193284/150‑1 (MQ=255) aTCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGcac > 2:4134043/1‑150 (MQ=255) tCGCGCAGCGGACCACGGTGCCAGTGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGcaca < 1:416416/150‑1 (MQ=255) tCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGcaca > 2:1733302/1‑150 (MQ=255) gcgcAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAgg > 2:4464768/1‑150 (MQ=255) gccggggACCAGGGTGCCAGAGGCTGATTTGCGCTGCTCGTTTCCGGGCCTCTGCGGGGGGGGGCCCGCTCCCACTGGACCCCCGCCGCCTTCACGGCCTGTGGGCTACCTGTGGGCGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTa < 1:148618/145‑1 (MQ=25) gcAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCCGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTa < 2:1565592/150‑1 (MQ=255) cGGCCCACGGTGCCAGAGGCTGAGTTGCGCTGACCCTTGACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCACGGCCTGTGGGCTACCTGGGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAcccc < 2:4318727/150‑1 (MQ=37) aCCACGGTGCCAGCGGCTGATTTGCGCTGAACCTTTACCGGCCTCGTCGCGGGCGCGCCCGCTCCCACCGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAccccccc < 2:1561830/150‑1 (MQ=255) aCCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAccccccc < 2:840095/150‑1 (MQ=255) cACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCGTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCCCAGGTAcccccccga > 1:2240186/1‑148 (MQ=255) ggTGCCAGTGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTaaaa < 1:463744/150‑1 (MQ=255) ggTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTaaaa > 2:3921729/1‑150 (MQ=255) cAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCCCGCCCCCAGGACCCCCCCCCCCGTCAAGGCCGGTGGGCGACCGGGGGGAGCGGGCCGGCCCCCCCAAGGGCCGGCCCCCGGCCCCCCCCCAAAAACcaa > 1:1326567/1‑150 (MQ=255) agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCTGGCATGCCCGCGAAAGGGCCGGCCCAGGTACCCCCCCGAAAAACaaaa > 1:3049598/1‑150 (MQ=255) agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCTGCACAGGTACCCCCCCTAAAAACaaaa > 2:636590/1‑150 (MQ=255) agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa < 1:4000066/150‑1 (MQ=255) agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa < 2:248781/150‑1 (MQ=255) agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa > 2:916832/1‑150 (MQ=255) agGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCGGTGGGCTACCTGTGGGCGCGGGCCTGCCCGCGAAAGGGCCCGCACAGGGCCCCCCCCGGAAAACAAAAGc > 1:3673646/1‑150 (MQ=38) ggCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGcc < 1:703265/150‑1 (MQ=255) cTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCa < 2:1220463/150‑1 (MQ=255) cTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCa < 1:2154703/150‑1 (MQ=255) cTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCa < 1:210690/150‑1 (MQ=255) tGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGAACCCCCCCCCCGTCAAGGCCGGTGGGCTACCGGTGGGCGCGGGCCTGCCCCCGCAAGGGCCGGCACCGGGACCCCCCCGAAAAACAAAAGccccg > 2:887314/1‑148 (MQ=255) aCCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAAccc < 1:2072339/150‑1 (MQ=255) cTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAAcccat > 2:3979473/1‑148 (MQ=255) cTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACACGAACCACGCCGCCGTCAAGGCCTGTGGGCTACCGGTGGGAGCGGGCAAGCCCCCGAAAGGGCCCGCACAGGTACCCCCCCAAAAAACAAAAGCCCAGTAAATTCAAAaccat > 2:928804/1‑148 (MQ=255) tttACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTg < 2:1646028/150‑1 (MQ=255) tgtgccggccctttcgcgggcatgcccgctcccacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcGCGCCCGCGAAGAGGCCGGTAAAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTg > 2:3502518‑M2/84‑150 (MQ=255) aCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAACGCCCAGTAAATTCAAACCCTTGGCg < 2:499606/150‑1 (MQ=255) ccGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCGGTGGGAGCGGGCCTGCCCGCGAAAGggccggtaaaggttcagcgcaaatcagcctctggcaccgtggtccgctgcgcgatcgc < 2:1488125‑M2/150‑59 (MQ=255) cGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCGGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAAATCAAACCCTTGGCGaa > 2:3647789/1‑150 (MQ=255) ctctTCGCGGGCGCGCCCGCTCCCAAAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCCTGCCCGCGCAAGGGCCGGCACAGGTACCCCCCCTAAATACAAAAGCCCAGTAAATTCAAACCCATGGCGAACGCt > 2:2720646/1‑150 (MQ=39) cctttcgcgggcatgcccgctcccacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcGCGCCCGCGAAGAGGCCGGTAAAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCt > 2:3431273‑M2/75‑150 (MQ=255) ctTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtgt < 2:4037923/150‑1 (MQ=255) ctTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtgt < 2:375911/150‑1 (MQ=255) ctTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtgt < 1:928804/150‑1 (MQ=255) cgGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGAtt < 1:3558631/150‑1 (MQ=255) gcgcgcCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTccc < 2:2690960/150‑1 (MQ=255) gCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGggccggcaaaggttcagcgcaaatcagcctctggcaccgtggtccgctgcgcgatcgcttccggccgccattgcgcgcgcg < 1:1541312‑M2/150‑82 (MQ=255) tcccacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcGCGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCGAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcc > 1:176700‑M2/55‑150 (MQ=255) tcccacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcc > 2:4401395‑M2/55‑150 (MQ=255) tCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGggccggtaaaggttcagcgcaaatcagcctctggcaccgtggtccgctgcgcgatcgcttccggccgccattgcgcgcgcgcg < 1:3348271‑M2/150‑84 (MQ=255) cccACAGGAAACACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAGAggccggtaaaggttcagcgcaaatcagcctctggcaccgtggtccgctgcgcgatcgcttccggccgccattgcgcgcgcgcga < 2:1042837‑M2/150‑85 (MQ=255) ccacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccc > 1:1375707‑M2/53‑150 (MQ=255) ccacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGAATcccc > 1:3612002‑M2/53‑150 (MQ=255) CCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccc < 1:2588009‑M1/150‑1 (MQ=255) CCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccc > 2:467432‑M1/1‑150 (MQ=255) CCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccc < 1:4382640‑M1/150‑1 (MQ=255) cacaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcGCGCCCGCGAAGAGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCCGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATccccc > 1:1242234‑M2/52‑150 (MQ=255) cacaGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCGCGCCCGCGAAGAggccggtaaaggttcagcgcaaatcagcctctggcaccgtggtccgctgcgcgatcgcttccggccgccattgcgcgcgcgcgact < 1:1692110‑M2/150‑87 (MQ=255) cacaGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAGAggccggtaaaggttcagcgcaaatcagcctctggcaccgtggtccgctgcgcgatcgcttccggccgccattgcgcgcgcgcgact < 1:1009626‑M2/150‑87 (MQ=255) cacaGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAGAggccggtaaaggttcagcgcaaatcagcctctggcaccgtggtccgctgcgcgatcgcttccggccgccattgcgcgcgcgcgact < 2:786216‑M2/150‑87 (MQ=255) cacaGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAGAggccggtaaaggttcagcgcaaatcagcctctggcaccgtggtccgctgcgcgatcgcttccggccgccattgcgcgcgcgcgact < 2:2410840‑M2/150‑87 (MQ=255) CACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATccccc < 2:3011247‑M1/150‑1 (MQ=255) acaggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcGCGCCCGCGAAGAGGCCGGTAAAGGTACCCCCCCTAAAAACAAAAGCCCAGTCAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTCGCATcccccc > 2:2907374‑M2/51‑150 (MQ=255) acaGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCGCGCCCGCGAAGAggccggtaaaggttcagcgcaaatcagcctctggcaccgtggtccgctgcgcgatcgcttccggccgccattgcgcgcgcgcgactg < 2:2888537‑M2/150‑88 (MQ=255) ACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccccc < 1:280734‑M1/150‑1 (MQ=255) ACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccccc < 2:2087300‑M1/150‑1 (MQ=255) ACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATcccccc < 1:2532636‑M1/150‑1 (MQ=255) CAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCt < 2:25878‑M1/150‑1 (MQ=255) aggtagcccacaggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTg > 2:1036250‑M2/49‑150 (MQ=255) GAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGcc < 1:2203082‑M1/150‑1 (MQ=255) GAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGAGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGcc < 2:3261154‑M1/150‑1 (MQ=255) cACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCaggt > 2:2879555/1‑147 (MQ=255) aCGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTg > 1:2226051/1‑150 (MQ=255) aggccttgaaggcggcgtggttcctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATttgcggc > 1:3179040‑M2/38‑148 (MQ=255) ttCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCaata > 2:2640147/1‑150 (MQ=255) aaGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAataata < 1:2864961/150‑1 (MQ=255) aGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAAtaataa > 1:18414/1‑150 (MQ=255) aGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAAtaataa < 2:2732667/150‑1 (MQ=255) tgtgGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAAGAATAAGTTCa > 1:4479364/1‑150 (MQ=255) gCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTACATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGccc > 2:4201797/1‑150 (MQ=255) tACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAACAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGt < 2:526841/150‑1 (MQ=255) aCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTa < 2:1537399/150‑1 (MQ=255) cctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAg < 1:2536422‑M2/135‑1 (MQ=255) ctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAgc > 1:1342617‑M2/15‑150 (MQ=255) tgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGcc < 1:3921729‑M2/139‑1 (MQ=255) ctttcgcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGcc > 2:1653602‑M2/12‑150 (MQ=255) tttcgcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGccc > 2:1395501‑M2/11‑150 (MQ=255) gagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCCATAATAAGTTCAAGCCCGTAGCGCCCaa > 1:4322796‑M2/9‑150 (MQ=255) gagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCaa < 1:3486386‑M2/142‑1 (MQ=255) gggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCAt > 1:2128094‑M2/5‑150 (MQ=255) cATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGa < 2:2127659‑M2/149‑1 (MQ=255) gcgCCCGCGAAGAGGCCGGTAAAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGAg < 1:3502518/148‑1 (MQ=255) gCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGAGGc > 2:1920134/1‑150 (MQ=255) ccGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGAGGCCa < 1:163712/150‑1 (MQ=255) gAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGAGGCCAGCAt > 1:1114988/1‑150 (MQ=255) aaGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGAGGCCAGCATGt < 2:3416804/150‑1 (MQ=255) aGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGAGGCCAGCATGTa < 1:3383270/150‑1 (MQ=255) | GCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAACCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTCAAGCCCGTAGCGCCCAACCATCGAGGCCAGCATGTA > NC_002947/5335087‑5335385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |