Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,539,028 A→G 8.6% intergenic (+35/+68) nadE → / ← PP_4870 NH(3)‑dependent NAD(+) synthetase/azurin

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,539,0280AG 8.6% 326.7 / 16.7 124intergenic (+35/+68)nadE/PP_4870NH(3)‑dependent NAD(+) synthetase/azurin
Reads supporting (aligned to +/- strand):  ref base A (49/54);  new base G (2/8);  total (53/71)
Fisher's exact test for biased strand distribution p-value = 1.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.37e-01

Only 100 of 126 total aligned reads displayed.

CGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTC  >  NC_002947/5538879‑5539176
                                                                                                                                                     |                                                                                                                                                    
cgcgCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATa                                                                                                                                                      <  2:960058/150‑1 (MQ=255)
   gcAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCCCAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGa                                                                                                                                                   <  2:799172/150‑1 (MQ=255)
   gcAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGa                                                                                                                                                   <  1:2953803/150‑1 (MQ=255)
   gcAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTAACCCGCGCAAACGa                                                                                                                                                   >  1:659261/1‑150 (MQ=255)
   gcAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCAACGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGa                                                                                                                                                   <  1:684128/150‑1 (MQ=255)
    cAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAg                                                                                                                                                  <  2:2005894/150‑1 (MQ=255)
    cAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAg                                                                                                                                                  <  1:2486790/150‑1 (MQ=255)
     aGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                                 <  1:2901226/150‑1 (MQ=255)
     aGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                                 <  1:2793312/150‑1 (MQ=255)
       aTCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCTCGTATTCGCGGGt                                                                                                                                               <  1:1316438/150‑1 (MQ=255)
       aTCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGt                                                                                                                                               <  1:1760894/150‑1 (MQ=255)
         cGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCGAATACGAGGGTGa                                                                                                                                             >  2:590754/1‑150 (MQ=255)
          gATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGaa                                                                                                                                            <  2:3529236/150‑1 (MQ=255)
           aTGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAAc                                                                                                                                           <  2:1826268/150‑1 (MQ=255)
           aTGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTGACCCCCCCAAAAGAGGGTGAAc                                                                                                                                           >  1:849243/1‑150 (MQ=255)
                    tGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACg                                                                                                                                  <  2:1727956/150‑1 (MQ=255)
                         gggCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTc                                                                                                                             <  2:1786156/150‑1 (MQ=255)
                           gCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgc                                                                                                                           <  2:3927826/150‑1 (MQ=255)
                            cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgcg                                                                                                                          <  1:227317/150‑1 (MQ=255)
                            cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgcg                                                                                                                          <  1:4070457/150‑1 (MQ=255)
                            cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCCCGAATACGAGGGTGAACCCACCGACGCATTcgcg                                                                                                                          >  2:1108304/1‑150 (MQ=255)
                            cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCCCCAAAACGGGGGTGAACCCACCCACGCATTcgcg                                                                                                                          >  2:56606/1‑150 (MQ=255)
                             aGCCGTTTGACCAGGCAGCGTTCGACATCATCTTCGCCACATACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCATTGATAAGTGGCCTGCTGGTGCGGGTTCACCCGCTAATACGAGGGTGAACCCACCGACGAATTCGCgg                                                                                                                         <  2:3092667/150‑1 (MQ=255)
                             aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                         <  1:1279921/150‑1 (MQ=25)
                             aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                         <  2:1582493/150‑1 (MQ=25)
                             aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                         <  2:3785425/150‑1 (MQ=25)
                             aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                         <  2:4125532/150‑1 (MQ=25)
                             aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                         <  1:268264/150‑1 (MQ=255)
                             aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                         <  1:1510435/150‑1 (MQ=255)
                             aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                         <  2:3614268/150‑1 (MQ=255)
                             aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                         <  1:40699/150‑1 (MQ=255)
                             aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                         <  2:297892/150‑1 (MQ=255)
                             aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                         <  2:4514449/150‑1 (MQ=255)
                             aGCCGGTGGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                         <  1:2686401/150‑1 (MQ=255)
                              gCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCggg                                                                                                                        <  1:358601/150‑1 (MQ=255)
                              gCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCGCATACGAGGGTGGACCCACCCACGCAGTCGCggg                                                                                                                        >  2:503279/1‑150 (MQ=255)
                               ccGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGt                                                                                                                       <  1:4080964/150‑1 (MQ=255)
                                cGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTg                                                                                                                      <  2:3412655/150‑1 (MQ=25)
                                  gTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTCCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGaa                                                                                                                    <  2:3633326/150‑1 (MQ=21)
                                    tGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAAcc                                                                                                                  <  2:1267916/150‑1 (MQ=255)
                                                 ttCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCGCATACGAGGGTGAACCCCCCCCCGCCATCGCGGGGGAACCCGCGCCAGCAggg                                                                                                     >  1:1866664/1‑150 (MQ=255)
                                                     aCATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCCAAAAAGAGGGTGAACCCACCCACCCATTAGCGGGTGTAACCCCTCCGGCCGGGGTCg                                                                                                 >  1:336290/1‑150 (MQ=255)
                                                           gcgtcgCCACCCCCCCCACCCCCCCGCACCCGCGCTCACTGCCGTGCGCTCCTTTATACGTGGCCTGCAGGCGGGGGTTCACCGGCTAATACGCGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCa                                                                                           <  2:1330244/149‑1 (MQ=19)
                                                             gtcgCCACCTCCCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGc                                                                                         <  2:4485659/150‑1 (MQ=255)
                                                                 cccccgcccGCCAGCCCCAGCCCCCGCGCGACCTGCGGGGCGCTCCTGGCTCTGGGGCCGGCCGGTGGGGGGTCCCCCGCGAATACGGGGGGGAACCCACCGCCGCCGGCGCGGGGGCCCCCGCTCCTGCAGGGTTCGCCGTCAGCCttt                                                                                     <  2:1277259/143‑1 (MQ=255)
                                                                 ccACCTCCCGCAACACCCAGCACACGCGCGAACTGCCGTGCGAGCCTGGATAAGGGGCCTGCTGGAGCGGGTGCCCCCGCGAATACGAGGGGGAACCCACCGACGCCTTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCttt                                                                                     <  2:3999838/150‑1 (MQ=255)
                                                                 ccACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGGGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCttt                                                                                     <  2:3014466/150‑1 (MQ=255)
                                                                  cACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGTACCCACCGACGCCTTCGCGGGTGAACCCGCGCCGGCAGGGGTCGCCGGCAGCCTTTg                                                                                    >  2:359080/1‑150 (MQ=39)
                                                                      tACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCCCGAATACGAGGGTGAACCCACCGACGCAGTCGCGGGTGAACCCCCGCCTGCAGGGTTCGCCCTCCGCCGGTGATTa                                                                                >  2:861554/1‑150 (MQ=255)
                                                                          gCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCCCGAATACGAGGGTGAAACCACCCACCCCGTCGCGGGTGAACCCGCGCCAGCCGGGTTCGCCGTCAGCCGATGGTTACttt                                                                            >  1:3744742/1‑149 (MQ=255)
                                                                             acaCCCCGCACCAGCGCTAAGTGCCGTTCGCTCATTGATAAGTGGCCTGCTGGTGGGGGTTCCCCCGCTAATCGGAGGGTTAACCCACCGCCGCATTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACg                                                                         <  2:1273665/148‑1 (MQ=255)
                                                                             aGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAAAAAGAGGGTTAACCCACCCACCCAGTCGCGGGTGAAACCCCGCCAGCCGGGTTGGCCGGCCGCCTTttattaaatgtcg                                                                         >  2:1575239/1‑143 (MQ=255)
                                                                                 ccAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCGAATACGCGGGTGAACCCACCGCCCCAGTCGCGGGGGGACCCGCGCCGGCAGGGGTCGCCGGCCGCCGTTGATTACGTGACGCTGa                                                                     >  2:2142978/1‑150 (MQ=255)
                                                                                 ccAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCCCGCCAAAGAGGGTGTAAACACCCCCCCCATCGCGGGTGGAACCCCACCCGCACGGGTCGCCGGCAGCCGGTTTTTACTTGACGAttt                                                                     >  1:3270911/1‑148 (MQ=255)
                                                                                    gCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGCATACGCGGGTGAACCCACCGACCCAATCGCGGGGGAACCCGCGCCTGCCGGGTGCGGCGTCAGCCTGTGGTTAGTTGTCGATGTCCt                                                                  >  2:3280101/1‑150 (MQ=255)
                                                                                    gCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCCCCGACGCCTTCGCGGGTGAACCCGCGCCAGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCt                                                                  >  2:3280182/1‑150 (MQ=255)
                                                                                    gCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCGCCTGCAGGGTTCGCCGTCAGCCATTGAATACTTGACGATGACCt                                                                  >  2:2946685/1‑150 (MQ=255)
                                                                                     cacaCGCGCGAACTGCCGTTCGCTCCTTGATACGTGGCCTGCAGGTGGGGGTTCACCGGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGTTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCtt                                                                 <  2:2354230/150‑1 (MQ=255)
                                                                                     cacaAGCGCGAAGTGCCGTTCGCGCCTTTATACGTGGCCTGCAGGCGCGGGTTAACCGGCGAATCCGTGGGTGAACCCACCGACGCATTCGCGGTTCAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCtt                                                                 <  2:2354508/150‑1 (MQ=255)
                                                                                      acaAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTg                                                                <  2:1388197/150‑1 (MQ=255)
                                                                                          gcgcGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCCCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCATTGATTACTTGACGATGACCTTGccat                                                            >  2:2972017/1‑148 (MQ=255)
                                                                                          gcgcGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCCCGCAAACGAGGGTGAACCCACCCACGCAGTCGCGGGTGAACCCCCTCCAGGCGGGGTCGCCCTCCGCCGTTGATTACTTGTCGATTACCATGccgt                                                            >  2:2779348/1‑148 (MQ=255)
                                                                                             ccaccTGCCTTTCGCTCCTTGATAAGGGGCCTGCTGGTGCGGTTTCACCCGCTAATACGAGGGTCAACCCACCGACGCATTCGGGGGTTACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTtca                                                         <  2:195318/146‑1 (MQ=255)
                                                                                                aCTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCTAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTtcatca                                                      <  2:2227813/150‑1 (MQ=255)
                                                                                                  tGCCGTTCGCTCCTTGATAAGGGGCCTGCAGGAGCGGGTTCACCCGCTAATACGAGGGTGAACCCACCGACGCATTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCatcatc                                                    <  2:2821198/150‑1 (MQ=255)
                                                                                                    ccGTTCGCTCCTTGATACGTGGCGTGCAGGAGCGGGTTCACCGGCTAATCCGTGGGTGACCCCACCGCCGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCga                                                  <  2:3129655/150‑1 (MQ=38)
                                                                                                      gTTCGCTCCTTGATACGTGGCCTGCAGGTGCGGGTTCACCCGCTAATACGCGGGTGAACCCACCGACGCATTCGGGGGTGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCgaga                                                <  2:1946031/150‑1 (MQ=255)
                                                                                                              cTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCTCGTATTCGCGGGTGAAc                                                                                                                                           >  2:1418757/1‑51 (MQ=18)
                                                                                                              cTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCTCGTATTCGCGGGTGAAc                                                                                                                                           <  1:1418757/51‑1 (MQ=18)
                                                                                                              cTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAAACCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTAGCCGTCATCCTTTGATTAATTGACGATGACCTTTCCTTTCATAATCGAGATGTGGccc                                        >  2:4435138/1‑150 (MQ=37)
                                                                                                                      ggggCCGGCTGGCGGGGGTACCCCCGCTAATAGGTGGGTGACCCCACCGACCCATGGGCGGGTGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGt                                <  1:1180847/148‑1 (MQ=255)
                                                                                                                              cAGGAGCGGGTTCACCCCCGAAAAAGAGGGTGAAAACACCGACCCATTCGCGGGTGAAACCCCTCCAGCAGGGTTAGCCCTCAGCCTTTGATTACATGAAGATTAACTTTCCATTCAAAATAGAGATGTGGCCCGGGAAGGTGAagaaga                        >  2:3706698/1‑150 (MQ=255)
                                                                                                                              cAGGAGCGGGTTCAACCCCCAATAAGAGGGTGAAACCACCCACGCAATAGCGGGTGAAACCCCTCCATCAGGGTTAGCCGTCAGCCTTTTTTTAATTTAAGATGACCATTCCTTTCAAAATAGAGATGTGGCCCGGGAAGGTGCagaaga                        >  2:3706705/1‑150 (MQ=255)
                                                                                                                                ggAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGaagaag                      <  2:1427771/150‑1 (MQ=255)
                                                                                                                                   gggggTTCACCCGCCAATACGAGGGTGAACCCACCCACGCAGTCGCGGGTCACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTg                   <  1:3612460/148‑1 (MQ=255)
                                                                                                                                     gggTTCACCCGCTAATACGAGGGTGAACCCACCGACGCATTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTa                 <  1:3702984/150‑1 (MQ=255)
                                                                                                                                     gggTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTa                 <  2:3866162/150‑1 (MQ=255)
                                                                                                                                      ggTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAg                >  1:1151172/1‑150 (MQ=255)
                                                                                                                                      ggTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAg                >  1:1151293/1‑150 (MQ=255)
                                                                                                                                       gTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGt               >  2:4428833/1‑150 (MQ=25)
                                                                                                                                       gTTCACCCGCGAATACGAGGTTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGt               <  1:2946685/150‑1 (MQ=255)
                                                                                                                                       gTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGt               >  1:2391190/1‑150 (MQ=255)
                                                                                                                                       gTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGt               >  1:2391042/1‑150 (MQ=255)
                                                                                                                                        ttCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTc              >  2:2504402/1‑150 (MQ=255)
                                                                                                                                        ttCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTc              >  1:2997452/1‑150 (MQ=255)
                                                                                                                                        ttCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTc              >  2:2504573/1‑150 (MQ=255)
                                                                                                                                          cACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcac            >  2:1246987/1‑150 (MQ=255)
                                                                                                                                           aCCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacc           >  1:1104592/1‑150 (MQ=25)
                                                                                                                                           aCCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCCGGGTTCGCCGTCAGCCTGTGCGTACGTGACGATGACCTTGCCTTTCATCATCGAGAGGTGGCCCGGGACGGTGCGGACGAAGCGGGAGTcccc           >  2:2941089/1‑150 (MQ=37)
                                                                                                                                           aCCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacc           >  2:499549/1‑150 (MQ=255)
                                                                                                                                             ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTTCTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGGCCGGGAATGTGCAGAATAAGCTGTAGTcaccac         >  2:1923980/1‑150 (MQ=255)
                                                                                                                                             ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGACGGTGCAGAAGAAGCTGTAGTcaccac         >  2:1006759/1‑150 (MQ=255)
                                                                                                                                             ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac         >  2:2343038/1‑150 (MQ=255)
                                                                                                                                              cgcgAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCaccacc        >  1:4118710/1‑150 (MQ=255)
                                                                                                                                               gcgAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCg       >  1:2156485/1‑150 (MQ=255)
                                                                                                                                               gcgAAAACGAGGGTGAAACCACCGACGCATTCGCGGGTGAAACCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTTGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccaaag       >  2:3727879/1‑147 (MQ=255)
                                                                                                                                                 gAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGc     >  1:3343279/1‑150 (MQ=255)
                                                                                                                                                 gAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGc     >  2:3054231/1‑150 (MQ=255)
                                                                                                                                                   aTACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCtt   >  1:2143045/1‑150 (MQ=255)
                                                                                                                                                    tACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTc  >  1:264770/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTC  >  NC_002947/5538879‑5539176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: