Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,539,032 G→C 7.7% intergenic (+39/+64) nadE → / ← PP_4870 NH(3)‑dependent NAD(+) synthetase/azurin

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,539,0320GC 7.7% 392.9 / 19.1 126intergenic (+39/+64)nadE/PP_4870NH(3)‑dependent NAD(+) synthetase/azurin
Reads supporting (aligned to +/- strand):  ref base G (60/56);  new base C (2/8);  total (62/64)
Fisher's exact test for biased strand distribution p-value = 9.58e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.92e-01

Only 100 of 132 total aligned reads displayed.

CAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCT  >  NC_002947/5538883‑5539181
                                                                                                                                                     |                                                                                                                                                     
cAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAg                                                                                                                                                       <  1:2486790/150‑1 (MQ=255)
 aGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGTGGGTTCACCCTCGTATTCGCgg                                                                                                                                                      <  1:2793312/150‑1 (MQ=255)
   aTCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCTCGTATTCGCGGGt                                                                                                                                                    <  1:1316438/150‑1 (MQ=255)
   aTCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGt                                                                                                                                                    <  1:1760894/150‑1 (MQ=255)
     cGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCGAATACGAGGGTGa                                                                                                                                                  >  2:590754/1‑150 (MQ=255)
      gATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGaa                                                                                                                                                 <  2:3529236/150‑1 (MQ=255)
       aTGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAAc                                                                                                                                                <  2:1826268/150‑1 (MQ=255)
       aTGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTGACCCCCCCAAAAGAGGGTGAAc                                                                                                                                                >  1:849243/1‑150 (MQ=255)
           cTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCTCGTATTCGCGGGTGAAcccgc                                                                                                                                            <  1:3563204/150‑3 (MQ=255)
                tGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACg                                                                                                                                       <  2:1727956/150‑1 (MQ=255)
                     gggCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTc                                                                                                                                  <  2:1786156/150‑1 (MQ=255)
                     gggCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTc                                                                                                                                  <  2:1091492/150‑1 (MQ=255)
                        cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgcg                                                                                                                               <  1:227317/150‑1 (MQ=255)
                        cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTcgcg                                                                                                                               <  1:4070457/150‑1 (MQ=255)
                        cAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCCCCAAAACGGGGGTGAACCCACCCACGCATTcgcg                                                                                                                               >  2:56606/1‑150 (MQ=255)
                         aGCCGTTTGACCAGGCAGCGTTCGACATCATCTTCGCCACATACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCATTGATAAGTGGCCTGCTGGTGCGGGTTCACCCGCTAATACGAGGGTGAACCCACCGACGAATTCGCgg                                                                                                                              <  2:3092667/150‑1 (MQ=255)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCTAATACGAGGGTTAACCCACCGACGCATTCGCgg                                                                                                                              <  1:2158014/150‑1 (MQ=255)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                              <  2:4125532/150‑1 (MQ=25)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                              <  2:3785425/150‑1 (MQ=25)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCgg                                                                                                                              <  1:1279921/150‑1 (MQ=25)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                              <  1:4416030/150‑1 (MQ=255)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                              <  1:40699/150‑1 (MQ=255)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                              <  2:297892/150‑1 (MQ=255)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                              <  2:3614268/150‑1 (MQ=255)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                              <  1:1510435/150‑1 (MQ=255)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                              <  1:1734752/150‑1 (MQ=255)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                              <  2:4514449/150‑1 (MQ=255)
                         aGCCGGTTGACCAGGCAGCGTTCGACATCAGCGTCGCCACCTACCGCACGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                              <  1:12126/150‑1 (MQ=255)
                         aGCCGGTGGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCgg                                                                                                                              <  1:2686401/150‑1 (MQ=255)
                           ccGGTTGACCAGGCAGCGTTCGCCATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGACTGCGTCGGTGGGTTCACCCTCGTATTCGCGGGt                                                                                                                            <  1:323840/150‑1 (MQ=25)
                           ccGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGt                                                                                                                            <  2:457198/150‑1 (MQ=25)
                           ccGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGt                                                                                                                            <  1:4080964/150‑1 (MQ=255)
                            cGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTg                                                                                                                           <  2:3412655/150‑1 (MQ=25)
                                tGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAAcc                                                                                                                       <  2:1267916/150‑1 (MQ=255)
                                 gACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGGACCCACCGACGCCTTCGCGGGTGAAccc                                                                                                                      >  2:3702984/1‑150 (MQ=255)
                                                 aCATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCCAAAAAGAGGGTGAACCCACCCACCCATTAGCGGGTGTAACCCCTCCGGCCGGGGTCg                                                                                                      >  1:336290/1‑150 (MQ=255)
                                                       tcgtcgCCACCTACCGCACGACCCAGCACACGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCa                                                                                                <  2:2920277/150‑1 (MQ=255)
                                                       gcgtcgCCACCCCCCCCACCCCCCCGCACCCGCGCTCACTGCCGTGCGCTCCTTTATACGTGGCCTGCAGGCGGGGGTTCACCGGCTAATACGCGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCa                                                                                                <  2:1330244/149‑1 (MQ=19)
                                                             cccccgcccGCCAGCCCCAGCCCCCGCGCGACCTGCGGGGCGCTCCTGGCTCTGGGGCCGGCCGGTGGGGGGTCCCCCGCGAATACGGGGGGGAACCCACCGCCGCCGGCGCGGGGGCCCCCGCTCCTGCAGGGTTCGCCGTCAGCCttt                                                                                          <  2:1277259/143‑1 (MQ=255)
                                                             ccACCTCCCGCAACACCCAGCACACGCGCGAACTGCCGTGCGAGCCTGGATAAGGGGCCTGCTGGAGCGGGTGCCCCCGCGAATACGAGGGGGAACCCACCGACGCCTTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCttt                                                                                          <  2:3999838/150‑1 (MQ=255)
                                                             ccACCTCCCGCAACACCCAGCACAAGCGCGAACTGCGGTTCGCTCCTTGATACGTGGCCTGCAGGAGGGGGTTCACCCGCTAATACGTGGTTTAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCttt                                                                                          <  2:1673142/150‑1 (MQ=38)
                                                              cACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGTACCCACCGACGCCTTCGCGGGTGAACCCGCGCCGGCAGGGGTCGCCGGCAGCCTTTg                                                                                         >  2:359080/1‑150 (MQ=39)
                                                                      gCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCCCGAATACGAGGGTGAAACCACCCACCCCGTCGCGGGTGAACCCGCGCCAGCCGGGTTCGCCGTCAGCCGATGGTTACttt                                                                                 >  1:3744742/1‑149 (MQ=255)
                                                                         acaCCCCGCACCAGCGCTAAGTGCCGTTCGCTCATTGATAAGTGGCCTGCTGGTGGGGGTTCCCCCGCTAATCGGAGGGTTAACCCACCGCCGCATTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACg                                                                              <  2:1273665/148‑1 (MQ=255)
                                                                         aGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAAAAAGAGGGTTAACCCACCCACCCAGTCGCGGGTGAAACCCCGCCAGCCGGGTTGGCCGGCCGCCTTttattaaatgtcg                                                                              >  2:1575239/1‑143 (MQ=255)
                                                                             ccAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGGTCACCCGCGAATACGCGGGTGAACCCACCGCCCCAGTCGCGGGGGGACCCGCGCCGGCAGGGGTCGCCGGCCGCCGTTGATTACGTGACGCTGa                                                                          >  2:2142978/1‑150 (MQ=255)
                                                                                gCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGCATACGCGGGTGAACCCACCGACCCAATCGCGGGGGAACCCGCGCCTGCCGGGTGCGGCGTCAGCCTGTGGTTAGTTGTCGATGTCCt                                                                       >  2:3280101/1‑150 (MQ=255)
                                                                                gCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCCCCGACGCCTTCGCGGGTGAACCCGCGCCAGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCt                                                                       >  2:3280182/1‑150 (MQ=255)
                                                                                 cacaCGCGCGAACTGCCGTTCGCTCCTTGATACGTGGCCTGCAGGTGGGGGTTCACCGGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGTTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCtt                                                                      <  2:2354230/150‑1 (MQ=255)
                                                                                 cacaAGCGCGAAGTGCCGTTCGCGCCTTTATACGTGGCCTGCAGGCGCGGGTTAACCGGCGAATCCGTGGGTGAACCCACCGACGCATTCGCGGTTCAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCtt                                                                      <  2:2354508/150‑1 (MQ=255)
                                                                                  acaAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTg                                                                     <  2:1388197/150‑1 (MQ=255)
                                                                                      gcgcGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCCCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCATTGATTACTTGACGATGACCTTGccat                                                                 >  2:2972017/1‑148 (MQ=255)
                                                                                         ccaccTGCCTTTCGCTCCTTGATAAGGGGCCTGCTGGTGCGGTTTCACCCGCTAATACGAGGGTCAACCCACCGACGCATTCGGGGGTTACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTtca                                                              <  2:195318/146‑1 (MQ=255)
                                                                                            aCTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCTAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTtcatca                                                           <  2:2227813/150‑1 (MQ=255)
                                                                                              tGCCGTTCGCTCCTTGATAAGGGGCCTGCAGGAGCGGGTTCACCCGCTAATACGAGGGTGAACCCACCGACGCATTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCatcatc                                                         <  2:2821198/150‑1 (MQ=255)
                                                                                                ccGTTCGCTCCTTGATACGTGGCGTGCAGGAGCGGGTTCACCGGCTAATCCGTGGGTGACCCCACCGCCGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCga                                                       <  2:3129655/150‑1 (MQ=38)
                                                                                                  gTTCGCTCCTTGATACGTGGCCTGCAGGTGCGGGTTCACCCGCTAATACGCGGGTGAACCCACCGACGCATTCGGGGGTGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCgaga                                                     <  2:1946031/150‑1 (MQ=255)
                                                                                                         ccTTGATAAGTGGCCTGCAGGAGCGGGTTAAACCCCGAAAACGAGGGTGTAACCACCCACCCAATCGCGGGTGAAACCGCTCCTGCAGGGTTAGCCGTCAGCCGTTGTTTACATGGCCATGACCATGCCGTTGATAATCCAGAAGTgggc                                              >  2:2426282/1‑148 (MQ=255)
                                                                                                          cTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAAACCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTAGCCGTCATCCTTTGATTAATTGACGATGACCTTTCCTTTCATAATCGAGATGTGGccc                                             >  2:4435138/1‑150 (MQ=37)
                                                                                                                 cggggccggccGGCGGGGGTCCCCCGGCGAATCGGCGGGTCACCCCACCGCCGCTTTCGGGGGTCACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAgg                                      <  1:2817215/147‑1 (MQ=255)
                                                                                                                      ccTGCTGGAGCGGGTTCCCCCGCTAATACGAGGGTGAACCCACCGACGCTTTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCag                                 <  2:1419949/150‑1 (MQ=255)
                                                                                                                          cAGGAGCGGGTTCACCCCCGAAAAAGAGGGTGAAAACACCGACCCATTCGCGGGTGAAACCCCTCCAGCAGGGTTAGCCCTCAGCCTTTGATTACATGAAGATTAACTTTCCATTCAAAATAGAGATGTGGCCCGGGAAGGTGAagaaga                             >  2:3706698/1‑150 (MQ=255)
                                                                                                                          cAGGAGCGGGTTCAACCCCCAATAAGAGGGTGAAACCACCCACGCAATAGCGGGTGAAACCCCTCCATCAGGGTTAGCCGTCAGCCTTTTTTTAATTTAAGATGACCATTCCTTTCAAAATAGAGATGTGGCCCGGGAAGGTGCagaaga                             >  2:3706705/1‑150 (MQ=255)
                                                                                                                            ggAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGaagaag                           <  2:1427771/150‑1 (MQ=255)
                                                                                                                              aGCGGGTTCACCCGCTAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCt                         <  2:720703/150‑1 (MQ=255)
                                                                                                                               gggggTTCACCCGCCAATACGAGGGTGAACCCACCCACGCAGTCGCGGGTCACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTg                        <  1:3612460/148‑1 (MQ=255)
                                                                                                                                 gggTTCACCCGCTAATACGAGGGTGAACCCACCGACGCATTCGGGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTa                      <  1:3702984/150‑1 (MQ=255)
                                                                                                                                 gggTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTa                      <  2:3866082/150‑1 (MQ=255)
                                                                                                                                 gggTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTa                      <  2:2148041/150‑1 (MQ=255)
                                                                                                                                 gggTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTa                      <  2:3866162/150‑1 (MQ=255)
                                                                                                                                  ggTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAg                     >  1:1151293/1‑150 (MQ=255)
                                                                                                                                  ggTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAg                     >  1:1151172/1‑150 (MQ=255)
                                                                                                                                   gTTCACCCGCGAATACGAGGTTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGt                    <  1:2946685/150‑1 (MQ=255)
                                                                                                                                   gTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGt                    >  1:2391042/1‑150 (MQ=255)
                                                                                                                                    ttCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTc                   >  2:2504573/1‑150 (MQ=255)
                                                                                                                                    ttCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTc                   >  1:2997452/1‑150 (MQ=255)
                                                                                                                                     tCACCCTCGTATTCGCGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTca                  >  2:4132979/1‑150 (MQ=255)
                                                                                                                                      cACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcac                 >  2:1246987/1‑150 (MQ=255)
                                                                                                                                       aCCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacc                >  1:1104592/1‑150 (MQ=25)
                                                                                                                                       aCCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCCGGGTTCGCCGTCAGCCTGTGCGTACGTGACGATGACCTTGCCTTTCATCATCGAGAGGTGGCCCGGGACGGTGCGGACGAAGCGGGAGTcccc                >  2:2941089/1‑150 (MQ=37)
                                                                                                                                       aCCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacc                >  2:499549/1‑150 (MQ=255)
                                                                                                                                       aCCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcacc                >  1:2535416/1‑150 (MQ=255)
                                                                                                                                         ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGACCCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac              >  2:1943973/1‑150 (MQ=255)
                                                                                                                                         ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGACGGTGCAGAAGAAGCTGTAGTcaccac              >  2:1006759/1‑150 (MQ=255)
                                                                                                                                         ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac              >  2:324237/1‑150 (MQ=255)
                                                                                                                                         ccGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTcaccac              >  2:2979045/1‑150 (MQ=255)
                                                                                                                                          cgcgAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCaccacc             >  1:4118710/1‑150 (MQ=255)
                                                                                                                                             gAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGc          >  1:3343279/1‑150 (MQ=255)
                                                                                                                                             gAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGc          >  2:3054231/1‑150 (MQ=255)
                                                                                                                                               attcgcgggTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCtt        >  1:103653/7‑150 (MQ=255)
                                                                                                                                               aTACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCtt        >  1:2143045/1‑150 (MQ=255)
                                                                                                                                                tACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTc       >  1:264770/1‑150 (MQ=255)
                                                                                                                                                  cGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCa     >  1:2014723/1‑150 (MQ=255)
                                                                                                                                                   gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGGAGCTGTAGTCACCACCGGCTTCCAg    >  2:4431673/1‑150 (MQ=255)
                                                                                                                                                   gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg    >  2:4431698/1‑150 (MQ=255)
                                                                                                                                                   gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg    >  1:1987898/1‑150 (MQ=255)
                                                                                                                                                   gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg    >  1:559741/1‑150 (MQ=255)
                                                                                                                                                   gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg    >  2:2589105/1‑150 (MQ=255)
                                                                                                                                                   gAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCGGTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAg    >  1:3395230/1‑150 (MQ=255)
                                                                                                                                                     gggTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCt  >  2:2724673/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCT  >  NC_002947/5538883‑5539181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: