| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,559,758 | A→C | 10.3% | intergenic (‑156/+175) | PP_4888 ← / ← purA | methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,559,758 | 0 | A | C | 10.3% | 575.6 / 6.5 | 203 | intergenic (‑156/+175) | PP_4888/purA | methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base A (93/82); new base C (4/23); total (97/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.59e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 209 total aligned reads displayed.
ACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCG > NC_002947/5559609‑5559907 | aCCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACaa < 1:2934865/150‑1 (MQ=255)aCCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACaa < 1:1890814/150‑1 (MQ=255) cTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACgg < 1:1025327/150‑1 (MQ=255) tCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCGACAACGGc > 1:1919289/1‑150 (MQ=255) cGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGcc > 1:681376/1‑150 (MQ=255) gtTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTgc < 2:2135157/150‑1 (MQ=255) ttCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCAGCGcc > 1:1720115/1‑150 (MQ=255) cTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCGGCGCCCa > 1:2481949/1‑150 (MQ=255) gcCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCaa > 1:1568327/1‑149 (MQ=255) ccACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATc > 2:706715/1‑150 (MQ=255) cACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCg > 1:1269002/1‑150 (MQ=255) aCTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCCTCGt > 1:2439569/1‑150 (MQ=255) aCTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGt > 2:3176762/1‑150 (MQ=255) aCTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGt > 1:2749462/1‑150 (MQ=255) cTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGtt < 2:1372677/150‑1 (MQ=255) atATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGtt < 1:875195/149‑1 (MQ=255) tttGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTtgtgt > 1:2148064/1‑150 (MQ=255) tGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGc < 1:277854/150‑1 (MQ=255) tGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGc < 1:507902/150‑1 (MQ=255) tGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGc < 2:2243379/150‑1 (MQ=255) tGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCca > 2:1038428/1‑150 (MQ=255) aTCTACAGAAACTTCTTACGGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATa < 2:1952564/150‑1 (MQ=255) aTCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCACCTACAACGGCCAGCGCCCAACCATCGTTGTGTGCCCACATa > 1:2522648/1‑150 (MQ=255) tattcAGAATCTTCTTACTGCTATGGTTGTGGCGGAGGGAGCGGGGTAATGCGCGAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTATTCCCGCTCGTACATCGGCGTGCGCCCAACCATCGTTGTGTGCCCACATAg < 2:2499525/146‑1 (MQ=255) tACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGa < 1:1530578/150‑1 (MQ=255) tACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGa < 2:1002782/150‑1 (MQ=255) tACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGa < 1:3806116/150‑1 (MQ=255) aCAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAg > 2:1459377/1‑150 (MQ=255) cAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGc > 2:2644112/1‑150 (MQ=255) cAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGc < 1:4140282/150‑1 (MQ=255) cAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGc > 2:3396191/1‑150 (MQ=255) aGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCg > 2:4348720/1‑150 (MQ=255) gaagggccgcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgtATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg > 2:1842119‑M1/83‑150 (MQ=255) gAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg < 1:3391280/150‑1 (MQ=255) gAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCgg < 2:3051192/150‑1 (MQ=255) aaaCTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCggg < 2:741980/150‑1 (MQ=255) aaaCTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCAGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCggg > 1:2024301/1‑150 (MQ=255) aaCTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGt > 2:3557681/1‑150 (MQ=255) cttcttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGttt < 1:1901012/150‑1 (MQ=255) ttcttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTa > 2:851766/1‑150 (MQ=255) tcttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAc < 2:2891709/150‑1 (MQ=255) tcttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAc < 1:4052888/150‑1 (MQ=255) tcttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAc < 1:3017686/150‑1 (MQ=255) cttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAcc < 1:3558728/150‑1 (MQ=255) cttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAcc < 1:2376808/150‑1 (MQ=255) cacaCAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAcc > 2:2398912/4‑150 (MQ=255) ttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAccc > 2:324928/1‑150 (MQ=255) ttACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAccc < 1:3252205/150‑1 (MQ=255) gcggcgttttcatttgtgggcatgtctgtgctggccaatatccaccggtaatccaccgttgccgccgctaccgcATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAccc > 1:4380887‑M1/75‑150 (MQ=255) aGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGa > 2:3473309/1‑150 (MQ=255) aGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGa > 1:280595/1‑150 (MQ=255) aGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTAAACCcgctc < 2:1169885/150‑3 (MQ=255) aGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCAACGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGa > 1:96858/1‑150 (MQ=255) gCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGaa < 2:4481279/150‑1 (MQ=255) cAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAAt > 2:2249199/1‑150 (MQ=255) aaGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATa < 1:3525606/150‑1 (MQ=255) aaGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATa > 2:3191020/1‑150 (MQ=255) gCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAgcgg > 2:4100345/1‑150 (MQ=255) ccGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAgcggc > 2:4282528/1‑150 (MQ=255) cGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAgcggcg > 1:2133968/1‑150 (MQ=255) agCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACgg > 2:480122/1‑150 (MQ=255) cGGGGAAATGCGCCACGGTCTAGCATTGGGGTTTGGTGTGCAGGCCCATTCGGGGGTAAACCCGCTCCTACACCGGCCTGCGCCAAACCATCGTTGTGTGCCCAAATAGGAGGGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTg < 1:3641383/150‑1 (MQ=38) cGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTg < 2:1430515/150‑1 (MQ=255) cGGGGAAATGCGCAAAGGTCTAGCAATGGGTTTTCGTTTGCAGGCCCATTCGCGGTTAAACACGCTCCTACAACGGCCTGCGCCAAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTg < 2:1617641/150‑1 (MQ=38) ggggAAAGGCGCCATGGTCTAGCATTGGGGTTTCGTGTGCCGCCCAATTCGGGGGAAAACCCGCTCCAACACCGGCCTGCGCCCAACCATGGTTGTGTGCCCACATCGGTGGGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTgg < 1:3093976/150‑1 (MQ=37) gggAATTGCGCCAAGGTCTAGCATTGGGTTTTGGTGTGCAGGCCAATTCGCGGGTAAACCCGCCCCTACAACGGCCTGCGCCCAACCTTCGTTGTGTGCCCACATAGGTGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGa < 1:322101/150‑1 (MQ=38) aTGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGGGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTAcc < 2:1241688/150‑1 (MQ=255) gcgcCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGCATACGGTAGCGGCGGCAACGGTGGATTACCgg > 2:3525279/1‑150 (MQ=255) cgcCAAGGTCTCGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACACCGGCCGGCGCCCAACCATCGTTGTGTGCCCACATAGGCGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGt < 2:3126375/150‑1 (MQ=255) cgcCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGt < 2:2652178/150‑1 (MQ=255) cgcCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGGAGCGGCGGCAACGGTGGGTTACCGGt > 1:88900/1‑150 (MQ=255) gcCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCTTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTg < 2:1804388/150‑1 (MQ=255) ccAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTgg < 2:2829605/150‑1 (MQ=255) ccAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACACCGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTgg < 2:691550/150‑1 (MQ=255) ccAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTgg < 2:1456080/150‑1 (MQ=255) gTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATAtt > 1:3433793/1‑150 (MQ=255) tAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGc > 1:2974999/1‑150 (MQ=255) gCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCGCCGACAAAGGCCAGGCCCCAACCAGCCGTGTGTGCCCCCCCAGGGGCGGGTTTACCCGCGCATACCGTAGCGGCGGCAAACGTGGGTTACCGGGGGATATTTGccc > 1:1118171/1‑149 (MQ=255) aaTGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGc > 1:3924804/1‑150 (MQ=255) aTGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCCCCTACACCGGCCTGCGCCCACCCATCGTTGGGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGca < 1:1836859/150‑1 (MQ=255) tttCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACa > 2:4041809/1‑150 (MQ=255) tCGTGTGCTGGCCCATTCGGGGGTAAACCCGCTCCAACACCGGCCTGCGCCCAACCATGTTTGTGTGCCCACATAGGAGGGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATg < 1:4289657/150‑1 (MQ=38) tCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACCTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATg > 1:4345914/1‑150 (MQ=255) tCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATg > 2:107406/1‑150 (MQ=255) tCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATg > 2:596573/1‑150 (MQ=255) tCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATg > 1:2610825/1‑150 (MQ=255) gtgtGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGcc < 2:1330677/150‑1 (MQ=255) gggCAGGCCCCTTCGGGGGTAAACCCGCACATACCCGGGCCTGCGCCCAACCATGGTTGTGTGCCCACATCGGCGGGGTTTTCCCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCca < 1:1509354/148‑1 (MQ=37) tgCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTAACCGCGTATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCcac > 1:1706330/1‑150 (MQ=255) cAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTg < 2:3692885/128‑1 (MQ=255) cAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCCCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTg > 1:3692885/1‑128 (MQ=255) aGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCTTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACaaa < 1:2119537/150‑1 (MQ=255) ggttAAACCCGCGCCCACACGGGCCTGCGCCCAACAATGGTTGTGGGCCCACATAGGCGGGGTTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAAcgccgc < 1:2542700/147‑1 (MQ=37) GGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCcgcg < 2:3747176‑M1/150‑1 (MQ=255) tAAACCCGCTCATCCACCGGCCTGCGCCCAACCTTGTTGGTGTGCCCACTTAGGTGGGGTTTTACCCGGGAATAGGGTAGCGGGGGCAACGGTGGATTACCGGTGGATTTTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGc < 2:1720115/150‑1 (MQ=255) AAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGcc < 2:285807‑M1/150‑1 (MQ=255) GCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTtctc < 1:3364903‑M1/150‑1 (MQ=255) CCTACACCGGCCTGCGCCCAACCTTCTTTGTGTGCCCACATTGGAGGGGTTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAgg > 1:701688‑M1/1‑150 (MQ=255) CTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAggg < 2:3598989‑M1/150‑1 (MQ=255) TACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTGTCAGGGc < 1:56923‑M1/150‑1 (MQ=255) | ACCCTCGTGTTTTCTGGCGCCACTATTTTGATGGCATCTACAGAAACTTCTTACAGCAAGGGTTGTGCCGCAGGCAGCGGGGAAATGCGCCAAGGTCTAGCAATGGGGTTTCGTGTGCAGGCCCATTCGCGGGTAAACCCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAAATGAAAACGCCGCGGCCCTTCTCAGGGCCGCG > NC_002947/5559609‑5559907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |