| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,723,422 | A→T | 5.1% | intergenic (+25/+85) | PP_5021 → / ← glnQ | methyl‑accepting chemotaxis transducer/glutamine transport ATP‑binding protein GlnQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,723,422 | 0 | A | T | 5.1% | 754.5 / 18.6 | 226 | intergenic (+25/+85) | PP_5021/glnQ | methyl‑accepting chemotaxis transducer/glutamine transport ATP‑binding protein GlnQ |
| Reads supporting (aligned to +/- strand): ref base A (114/99); new base T (4/8); total (119/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 242 total aligned reads displayed.
TGATCAATGTGCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCG > NC_002947/5723273‑5723571 | tgATCAATGTGCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCa > 2:2881452/1‑150 (MQ=255) gATCAATGTGCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCaa > 2:1235930/1‑150 (MQ=255) gATCAATGTGCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCaa < 1:1883008/150‑1 (MQ=255) ccgcgaagtggctgaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCa < 1:1155506‑M1/12‑1 (MQ=255) ccgcgaagtggctgaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCa < 1:2345359‑M1/12‑1 (MQ=255) ccgcgaagtggctgaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCa < 2:2911365‑M1/12‑1 (MQ=255) ccgcgaagtggctgaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCa < 1:13962‑M1/12‑1 (MQ=255) ccgcgaagtggctgaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCa < 2:825948‑M1/12‑1 (MQ=255) cgcgaagtggctgaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCaa < 1:810935‑M1/13‑1 (MQ=255) cgcgaagtggctgaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCaa < 2:3732088‑M1/13‑1 (MQ=255) tCAATGTGCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGc < 1:2021506/150‑1 (MQ=255) aaTGTGCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGccc > 1:840246/1‑150 (MQ=255) tgtgCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGc < 2:3354952/150‑1 (MQ=255) tgtgCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGc < 2:1067215/150‑1 (MQ=255) gtggctgaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCAAGCCCGc < 2:3971572‑M1/19‑1 (MQ=255) tggctgaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCAAGCCCGCt < 1:2391155‑M1/20‑1 (MQ=255) tgCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTc > 1:1385546/1‑150 (MQ=255) ggctgaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCAAGCCCGCTc > 1:3289529‑M1/130‑150 (MQ=255) gCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACATCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTca < 2:776242/150‑1 (MQ=255) gggAAGATTCGGCTCAGCCCCGCGCGGCCAGTCCGCAGCCGGCAGCCTCGAGTCGAGAGCCGGAGCAGTTGGGGCAGCAAGTGCCGGGGCTGG‑GTGGGCGGCTCAGCATCTGACTTCGCCACGCCCTCGACGCGGGCAAGCCCGCTcaca < 2:4289072/150‑1 (MQ=255) gaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCTtgcccgcgaagaa > 1:963654‑M1/126‑144 (MQ=255) gaccgcgtgctgttcttcgaccatggcaagctgctggaagattcggccccggccgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCTtgcccgcgaagaa > 1:1220316‑M1/126‑144 (MQ=255) aTGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAg < 2:1904917/150‑1 (MQ=255) ttCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAACCCCGCTCACACAGGTAc > 1:68498/1‑150 (MQ=255) tCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACa > 2:521587/1‑150 (MQ=255) ggATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATc < 1:4387113/150‑1 (MQ=255) cAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCAccc < 2:2196409/150‑1 (MQ=255) gACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCAccccc > 2:4445674/1‑150 (MQ=255) gACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTACGCGGGCAAGCCCGCTCACACAGGTACATCAccccc > 2:2627611/1‑150 (MQ=255) aCCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCa < 2:3389078/150‑1 (MQ=255) ccAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCAt > 2:2533482/1‑150 (MQ=255) aGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCCAGCCCGCGCACACAGGTACATCACCCCCATCa > 1:3971507/1‑150 (MQ=255) gcgcGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCaa < 2:1567823/150‑1 (MQ=255) cAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAgtg > 1:2911365/1‑150 (MQ=255) gTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAgtggt < 1:595919/150‑1 (MQ=255) gTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAgtggt < 1:1357742/150‑1 (MQ=255) gTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCACACAAAGGTAAATCACCCCCATCAAGGCAgtggt > 1:261664/1‑150 (MQ=255) tGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAgtggtg > 2:558350/1‑150 (MQ=255) aGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACAt > 2:759560/1‑150 (MQ=255) gACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATg > 1:416505/1‑150 (MQ=255) gACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCACTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATg > 1:2294181/1‑150 (MQ=255) aCGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGc < 1:1005866/150‑1 (MQ=255) cGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCa < 2:1919161/150‑1 (MQ=255) ggCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCACTTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAg > 1:4451837/1‑150 (MQ=255) cAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGTTTGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCATGGCAGTGGTGGACATGCAGGa < 2:1382609/150‑1 (MQ=255) cAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGa < 2:1052865/150‑1 (MQ=255) gCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGc < 1:3857206/150‑1 (MQ=255) ccTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCg < 1:1108228/150‑1 (MQ=255) ccTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCg < 1:4206861/150‑1 (MQ=255) tCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCggg > 2:3782220/1‑150 (MQ=255) tCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCggg < 1:542537/150‑1 (MQ=255) tCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCggg < 1:427519/150‑1 (MQ=255) tCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCggg < 2:1806802/150‑1 (MQ=255) cGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGc < 2:3607217/150‑1 (MQ=255) aGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCtt < 1:306507/150‑1 (MQ=255) gTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTg < 1:527463/150‑1 (MQ=255) gTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTg < 1:2783885/150‑1 (MQ=255) gagaGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTAc > 1:2121051/1‑103 (MQ=255) gagaGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTAc < 2:2121051/103‑1 (MQ=255) cgcattcttcgctgcgccgaaagacccgcgtgcgcaggcattcctgcgccaggtgctgtaaccgcgcgggctTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGccc > 2:603796‑M1/73‑150 (MQ=255) cTGGAGCAGTTGGGGCAGCAATTGGGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCgaa < 1:4059183/150‑1 (MQ=255) tgcaGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCAAGCCcgctcct < 2:3849930/147‑5 (MQ=255) tGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCgaag > 2:2345359/1‑150 (MQ=255) gAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCCCGCACACACGTACATCACCCCCAACAAGGCAGTGGGGGACATGCAGGAGCGGGCTTGCCCGCgaagaa > 1:763060/1‑150 (MQ=255) aGCAGTTGGGGCAGCATTTGCGGGGGTTGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGaagaag < 1:3998375/150‑1 (MQ=255) gCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGc < 2:3559544/150‑1 (MQ=255) gTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCcg > 2:3411072/1‑150 (MQ=255) ttGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGAAAGCCCGATCAAACAGGTACAAAACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCcgc < 2:450013/150‑1 (MQ=255) ggggCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCcgcgc > 1:3664535/1‑150 (MQ=255) gcagcaATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGt > 2:1448921/1‑150 (MQ=255) gcagc‑aTTGGGGGGGGTGGTTTGGGGGGTTCAGCATCTTACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACCGGTACATCACCCCAATCACGGCTGGGGTGGACATGCCGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGt < 1:70768/150‑1 (MQ=255) tGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGGGGGCAAGCCCGCTAACACAGGTACATCACCCCCATAATGGCTGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCAc < 1:3305118/150‑1 (MQ=255) ggggATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTgg < 2:3177522/150‑1 (MQ=255) gggATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGgc > 2:3115271/1‑150 (MQ=255) gATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGgcgc > 2:3791275/1‑150 (MQ=255) aTGG‑TTGGGCGGTTCAGAATCTGACTTCGCCTCGCCCTCTTCGCGGGCACGCCCGCTCACACTGGTACATCACCCCCATCACGGCCGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCa < 1:157469/150‑1 (MQ=255) gg‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAgg < 1:3173804/150‑1 (MQ=255) gg‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAgg > 2:1970482/1‑150 (MQ=255) ttGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGaa > 1:2541583/1‑150 (MQ=255) ttGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGaa > 2:2485374/1‑150 (MQ=255) ttGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCAGGCGCAGGaa > 1:3579104/1‑150 (MQ=255) gTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTgc < 2:2319537/150‑1 (MQ=255) gTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTAAATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTgc < 1:1715933/150‑1 (MQ=255) cAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGCATTCCTgcgcc < 2:2636481/150‑2 (MQ=255) cATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCAcgc < 2:834534/150‑1 (MQ=255) cATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGGTACAGCACCTGGCGCAGGAATGCCGGCGCAcgc > 2:2993056/1‑150 (MQ=255) aTCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCCGGCTTGCCCGCGCAGAAGCCCGCGCGGGTAAACCACCTGGCGCAGGAAAGCCGGCGCAcgag > 1:1233781/1‑148 (MQ=255) tCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCgg > 2:1686816/1‑150 (MQ=255) tCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCgg > 1:3785070/1‑150 (MQ=255) tCTGACTTCGCCTCGCCCTCTGCGCGGGCAAGCCCGCTCACACAGGTACATCCCCCCCATCAAGGCAGTGGTGGACATGCCGGCGGGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCgg < 1:2040707/150‑1 (MQ=255) gcctcgccCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCgg > 2:2816852/1‑150 (MQ=255) gcctcgccCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCgg > 2:2592784/1‑150 (MQ=255) tcgccCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGgcgc > 1:926700/1‑150 (MQ=255) gaGCGGGCTTGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCgaagaa < 2:3301052‑M1/148‑1 (MQ=255) gaGCGGGCTTGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCgaagaa < 2:1011436‑M1/148‑1 (MQ=255) gaGCGGGCTTGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCgaagaa < 1:3650304‑M1/148‑1 (MQ=255) TCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCgaagaa < 1:953474‑M1/150‑1 (MQ=255) GGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCg < 1:1986589‑M1/150‑1 (MQ=255) GCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGc < 2:2415587‑M1/150‑1 (MQ=255) AAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCg > 2:1498840‑M1/1‑150 (MQ=255) | TGATCAATGTGCGGGATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGG‑TTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCG > NC_002947/5723273‑5723571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |