| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,726,262 | A→C | 8.6% | intergenic (‑186/+108) | PP_5024 ← / ← opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,726,262 | 0 | A | C | 8.6% | 402.7 / 16.9 | 144 | intergenic (‑186/+108) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Reads supporting (aligned to +/- strand): ref base A (69/61); new base C (6/8); total (75/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 146 total aligned reads displayed.
TGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGT > NC_002947/5726114‑5726410 | tgtTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAgg < 2:4029317/150‑1 (MQ=255) tgtTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAgg < 2:1695406/150‑1 (MQ=255) tgtTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAgg < 2:1875584/150‑1 (MQ=255) tgtTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAgg < 2:4069916/150‑1 (MQ=255) tgtTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGGACCCGCTCCAAAAAgg > 1:2067977/1‑150 (MQ=255) tgtTGGCACGGCCGTACGGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACACgg < 1:1126969/150‑1 (MQ=255) ttGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGGAACCCCACCGACAAGGGc > 2:383633/1‑150 (MQ=255) ttGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGAACCCCCACCAAAAAGGGc > 2:2640366/1‑150 (MQ=255) ggCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTTACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCACAATGAGGGGGTTAGGCCAAAATGCTTCGCGGGTGAACCCGGTCCTACAAGGGCAt < 2:2012431/150‑1 (MQ=255) ggCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCAt < 1:1068761/150‑1 (MQ=255) ggCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCAt < 1:723643/150‑1 (MQ=255) ggCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCAt < 1:436357/150‑1 (MQ=255) ggCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCAt < 2:3517077/150‑1 (MQ=255) ggCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCAt < 2:3612069/150‑1 (MQ=255) gCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCGACAAGGGCagg > 2:4028711/1‑148 (MQ=255) gCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCACCTACCAGGGCAtg > 2:2188382/1‑150 (MQ=255) gCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGCTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCAtg < 1:1283069/150‑1 (MQ=255) ggCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAAACCCCTCCAAAAAGGGCAAGTGTa > 1:1822736/1‑150 (MQ=255) ccGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑c < 2:4304202/150‑1 (MQ=255) gTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑ccc < 2:1317801/150‑1 (MQ=255) tACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCt > 2:674716/1‑150 (MQ=255) tACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCt < 2:1862403/150‑1 (MQ=255) tACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGGACCCCCGCCGACAACGGCCTGTGTAT‑accg > 1:433412/1‑149 (MQ=255) tcTGGCCGAAGCTTCGTATCGGTGAGGGATGCTAACTCATGGCGGCACGTGGACATAGAGCCGCAGTGGTACTTTGTTGGCCATAATGAGGGGTTTAGGCCAAAAAGCTTCGCGTGTGAACCCTCTCCTACAAGGGCATGTGTAT‑CCCtt < 2:421043/149‑2 (MQ=255) aCTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTg < 2:477564/150‑1 (MQ=255) cTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTgg < 1:3250988/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTa < 2:2421352/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTa < 2:294838/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTa < 2:1256206/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTa < 2:2104769/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGG‑TAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAg < 2:2992692/150‑1 (MQ=255) gCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAg < 2:1850945/150‑1 (MQ=255) ccGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAgg < 2:735566/150‑1 (MQ=255) cGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGa > 2:3704801/1‑150 (MQ=255) cGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCGGGTAggt > 2:2565705/1‑149 (MQ=255) caGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGc < 2:3061279/149‑1 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTACCCGCTCCAACAAGGGCATGTGTAT‑CCCGGGGAGGAGc > 1:4084484/1‑150 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGc < 1:4428531/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 2:1208224/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 1:595143/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCCCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCggg < 1:1841406/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGCTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCggg < 1:2238513/150‑1 (MQ=255) gtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAACAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGt < 2:2646030/150‑1 (MQ=255) tcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAAACCGCTCCTACAAGGGCAAGTGTAT‑ACCAGGTAGGAGCGGGtt > 1:4419152/1‑150 (MQ=255) cgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTc < 2:3458646/150‑1 (MQ=255) cGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCcg < 1:3565656/150‑1 (MQ=255) ggAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCCCGCCAACAACGGCATGTGTAT‑CCCGGGGTGGAGCGGGTTCAccccc > 1:1462660/1‑148 (MQ=255) gagaGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCGACAAGGGCATGTGTGT‑CCCTGGGAGGAGCGGGGTCACCcgcg > 1:1096817/1‑150 (MQ=255) agagGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCCGGGGGACTTTGTTGGCCAAACTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTGAACCcgctc < 2:1617014/150‑3 (MQ=21) agagGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTGAACCcgctc < 2:2222527/150‑3 (MQ=21) gggATGCTAACGCATGGCGGCCCGTGGACCTCGCGCCGCCGGGGGCCTTTGTTGGCCAACCGGAGGGGGTTCGGCCAAAAAGCTGCGCGGGTGAACCCGCTCCTACACGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAaga < 2:4452588/150‑1 (MQ=38) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCGCCAAAAAGGGCATGTGGGT‑ACCGGGTAGGGGCGGGGTCACCCGCGAAGAGGCCCgg > 2:1510729/1‑150 (MQ=255) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGTACCCCCGCCAAAAAAGGGCGGGGTAT‑GACCGGTAGGGGCGGGGTGGCCCGCGCAGAGGCCCgc > 1:473632/1‑149 (MQ=255) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGTAACCCCCCCAACAACGGCCAGGGTAT‑CCCAGGGAGGAGCGGGGTAACCCCCGCACAGGccccc > 1:1574420/1‑148 (MQ=255) ggcCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGGTCCCCCGCCAACAACGGCCTGTGTTT‑ACCCGGTAGGAGCGGGGTCACCCCCCCAAATGCCCCGGCAGGCGcccc > 1:3469862/1‑150 (MQ=255) ggcCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGGACCCCCGCCGACACGGGGCGGGGGAT‑CCCGGGGTGGGGCGGGGGGACCCGCGGAGAGGCCCCGGCCGGCGcccc > 2:1501360/1‑150 (MQ=255) gTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTAAAAGGGCCTGTGTAT‑CCCTGGTAGGAGCGGGGTCACCCGCGCAGAGGCCCCGTCAAGCGCCCCGTAgg > 2:2803523/1‑150 (MQ=39) cccTAGAGCCGCAGGGGGACTTGGTGGGCCAAAATGTGGGGGTTCGGCCAAAAAGCTTCGCGGTTGACCCCGCTCCTACACGGGCATGTGTAG‑CCCTGGTCGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCgg < 2:3905217/149‑1 (MQ=38) cTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCCCGCCGACAAGGGGATGTGGTT‑CCCGGGGCGGAGCGGGGTCACCACCGGAGAGGCCCGGGCATTCGCCCCGGAGGGCgggg > 2:208664/1‑149 (MQ=255) agagCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAATGCTTCGCGGGTGAAGCCGCTGCTTCAAGGGGATGTGTAT‑GGCTGGTTGGTGCGGGTTGACCCGCGAAGAGGGCCGGTCATGCGGCCCGTAGGGCGGGttg > 2:2932043/1‑149 (MQ=255) cccgccgGGGGACTTTGTGGGCCAAACTGCGGGGGTTCGGCCAAAAAGCTGCGGGGGTGACCCCGCTCCTACACGGGCTTGTGTAT‑CCCTGGTAGGAGCGGGTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATc < 2:1291335/149‑1 (MQ=255) ccGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCGCCAACAAGGGCCTGGGTAA‑CCCTGGTAGGAGCGGGTTCACCCGCCAAGAGGCCCGGTCATGCGCCCCGTGGGGCGGGGTCATCg > 2:4307907/1‑150 (MQ=255) cGCTGGGGGAGTTTGTTGGCCAAAATGAGGGGGTGCGGCCAAAAAGCTTCGCGGGTGACCCGGCGCCTACACGGGCTTGTGTAC‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCgg < 1:4128967/150‑1 (MQ=38) cAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTAACCGCGCCTACAAGGGGCTGTGTAT‑CCCGGGGGGGGGCGGGTTCACCCCCGAAGAGGCCCCGGCATTCGCCCCCGAGGGCGGGGTCATCgggg > 2:423071/1‑150 (MQ=255) aCTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCAACAAGGGCCTGTGTAT‑CCCTGGTAGGGGCGGGTTCACCCGCGCAGAGGCCCGGTCCTGCGCCCCGGAGGGCGGGTTCATCGGGGCGCCGaa > 2:3858980/1‑150 (MQ=255) ttgttgGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCGGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccg > 2:1452308/1‑150 (MQ=255) tgttgGCAAAAATGAGGGGGTTAGCCCAAAAAGCTTGGGGGGTTACCCCGCCCCTACCCGGGCTTGTGTAC‑CCCTGGTCGGCGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccgc < 2:409641/150‑1 (MQ=255) tgGCCAAATTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACcgccgc < 2:3600462/150‑1 (MQ=255) ccAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTAACCCCACCGACAACGGCCTGTGTAT‑CCCGGGTAGGAGCCGGGTCACCCCCCCAGAGGCCCCGGCAAGCGCCCCCGAGGGCGGGGTCAACGGGGGGCCCAACCCCcccgcc > 2:1171241/1‑148 (MQ=255) aaTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACACGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGa < 2:3094318/150‑1 (MQ=255) gggggTTAGGCCAAAAAGCTTCGCGGGTGAACCCCCTCCAACAAGGGCAAGTGTAT‑ACCTGGGAGGAGCGGGTTCAACCGCGAAGAGGCCCGGTCAAGCGCCCCCTAGGGCGGGTTCATAGGGGCGCCGAACCGCCGCGAACAGAACCGa > 2:3227903/1‑150 (MQ=255) ggggTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCACCAACAAAGGCCGGTGTAT‑CCCGGGGTGGAGCGGGTTCACCCCCGACGAGGCCCCGGGATGCGCCCCCGAGGGCGGGTTCAAAGGGGCGCCGACCCCCCGCGCACACAccccaa > 2:2270578/1‑147 (MQ=255) gTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCaa < 2:1676490/150‑1 (MQ=255) gTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCaa < 2:2591111/150‑1 (MQ=255) cgGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGtt < 2:3300881/150‑1 (MQ=255) gggTGAACCCGCTCCTACCAGGG‑ATACACATGCCCTTATAGGAGCGGGTTCACCCGCGAAGCGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTg > 2:3480775/1‑150 (MQ=21) gggTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTg > 1:3649686/1‑150 (MQ=255) gTGACCCCGCCCCTCCACGGGCTTGTGTTT‑CCCTGGTCGGCGCGGGTCCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc < 1:2188382/150‑1 (MQ=255) gTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc > 1:3335228/1‑150 (MQ=255) tGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGcc > 1:1592708/1‑150 (MQ=255) gAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCt > 2:2162750/1‑150 (MQ=25) gAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCt > 1:2886952/1‑150 (MQ=25) gAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCt > 1:2887138/1‑150 (MQ=25) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:2852125/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:3949804/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:3949576/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:2318861/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:156518/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:1143546/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:2095984/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:1049284/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGGAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:2096075/1‑150 (MQ=255) gCTCCTACATGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt < 2:1264058/150‑1 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 1:3161428/1‑150 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 1:3778329/1‑150 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 1:1500916/1‑150 (MQ=255) ccTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCa < 2:1822736/150‑1 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 1:2066738/1‑150 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 2:1379214/1‑150 (MQ=255) aaaGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGt < 1:1446562/149‑1 (MQ=255) | TGTGTTGGCACGGCCGTACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGT > NC_002947/5726114‑5726410 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |