| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,726,280 | G→T | 5.3% | intergenic (‑204/+90) | PP_5024 ← / ← opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,726,280 | 0 | G | T | 5.3% | 428.5 / 9.5 | 131 | intergenic (‑204/+90) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Reads supporting (aligned to +/- strand): ref base G (71/53); new base T (5/2); total (76/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.45e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
ACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCG > NC_002947/5726131‑5726428 | cTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTgg < 1:3250988/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTa < 2:1256206/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTa < 2:2421352/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGG‑TAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAg < 2:2992692/150‑1 (MQ=255) ccGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAgg < 2:735566/150‑1 (MQ=255) caGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGc < 2:3061279/149‑1 (MQ=255) aaGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGc < 1:4428531/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 1:614404/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCggg < 1:1152218/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCggg < 1:4404594/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGCTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCggg < 1:2238513/150‑1 (MQ=255) gtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAACAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGt < 2:2646030/150‑1 (MQ=255) aTCGGAGAGGGATGCTACCGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCAcc < 2:1511991/150‑1 (MQ=255) cGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCcg < 2:2625841/150‑1 (MQ=255) cGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCcg < 1:3565656/150‑1 (MQ=255) ggAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCCCGCCAACAACGGCATGTGTAT‑CCCGGGGTGGAGCGGGTTCAccccc > 1:1462660/1‑148 (MQ=255) ggAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTGAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCcgc < 1:4329494/150‑1 (MQ=255) gagaGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCGACAAGGGCATGTGTGT‑CCCTGGGAGGAGCGGGGTCACCcgcg > 1:1096817/1‑150 (MQ=255) agagGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCCGGGGGACTTTGTTGGCCAAACTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTGAACCcgctc < 2:1617014/150‑3 (MQ=21) agagGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTGAACCcgctc < 2:2222527/150‑3 (MQ=21) gggATGCTACCGCCGGGCGGCCCGTGGACCTAGAGCCGCCGGGGGACTTTGTGGGCCAAACGGAGGGGGGTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACACGGGCATGGGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAaga < 2:4452369/150‑1 (MQ=38) gggATGCTAACGCATGGCGGCCCGTGGACCTCGCGCCGCCGGGGGCCTTTGTTGGCCAACCGGAGGGGGTTCGGCCAAAAAGCTGCGCGGGTGAACCCGCTCCTACACGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAaga < 2:4452588/150‑1 (MQ=38) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCGCCAAAAAGGGCATGTGGGT‑ACCGGGTAGGGGCGGGGTCACCCGCGAAGAGGCCCgg > 2:1510729/1‑150 (MQ=255) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGTACCCCCGCCAAAAAAGGGCGGGGTAT‑GACCGGTAGGGGCGGGGTGGCCCGCGCAGAGGCCCgc > 1:473632/1‑149 (MQ=255) ggcCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGGACCCCCGCCGACACGGGGCGGGGGAT‑CCCGGGGTGGGGCGGGGGGACCCGCGGAGAGGCCCCGGCCGGCGcccc > 2:1501360/1‑150 (MQ=255) ggcCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGGGGAACCCCGCCAAAAAAGGGCTGTGTAT‑GCCGGGGGGGGGCGGGGTCACCCCCGCAGAGGCCCGGGCCTTCGcccc > 1:3470015/1‑150 (MQ=255) gACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTAACCCCTCCAACAAGGGCCTGTTTAT‑ACCAGGGTGGAGCGGGTTCAACCCCGGAGAGGCCCGGTCAAGCGCCCCGGAGGGCg > 1:2572411/1‑150 (MQ=255) cccTAGAGCCGCAGGGGGACTTGGTGGGCCAAAATGTGGGGGTTCGGCCAAAAAGCTTCGCGGTTGACCCCGCTCCTACACGGGCATGTGTAG‑CCCTGGTCGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCgg < 2:3905217/149‑1 (MQ=38) cTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCCCGCCGACAAGGGGATGTGGTT‑CCCGGGGCGGAGCGGGGTCACCACCGGAGAGGCCCGGGCATTCGCCCCGGAGGGCgggg > 2:208664/1‑149 (MQ=255) agagCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAATGCTTCGCGGGTGAAGCCGCTGCTTCAAGGGGATGTGTAT‑GGCTGGTTGGTGCGGGTTGACCCGCGAAGAGGGCCGGTCATGCGGCCCGTAGGGCGGGttg > 2:2932043/1‑149 (MQ=255) ccGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCGCCAACAAGGGCCTGGGTAA‑CCCTGGTAGGAGCGGGTTCACCCGCCAAGAGGCCCGGTCATGCGCCCCGTGGGGCGGGGTCATCg > 2:4307907/1‑150 (MQ=255) cGCTGGGGGAGTTTGTTGGCCAAAATGAGGGGGTGCGGCCAAAAAGCTTCGCGGGTGACCCGGCGCCTACACGGGCTTGTGTAC‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCgg < 1:4128967/150‑1 (MQ=38) ggggACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGgcgc < 2:1873439/150‑1 (MQ=255) aCTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCAACAAGGGCCTGTGTAT‑CCCTGGTAGGGGCGGGTTCACCCGCGCAGAGGCCCGGTCCTGCGCCCCGGAGGGCGGGTTCATCGGGGCGCCGaa > 2:3858980/1‑150 (MQ=255) ttgttgGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCGGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccg > 2:1452308/1‑150 (MQ=255) tgttgGCAAAAATGAGGGGGTTAGCCCAAAAAGCTTGGGGGGTTACCCCGCCCCTACCCGGGCTTGTGTAC‑CCCTGGTCGGCGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAAccgc < 2:409641/150‑1 (MQ=255) tgGCCAAATTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACcgccgc < 2:3600462/150‑1 (MQ=255) ggCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGGACCCCCGCCAACAAGGGCCTGTGTAT‑ACCGGGTTGGAGCGGGGTCACCCCCCAAGAGGCCCGGTCATTCGCCCCGGAGGGCGGGGTCATCGGGGCGCCGCAcccccccc > 1:4438034/1‑147 (MQ=255) gCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAAACCCCACCTAAAAGGGCATGTGTAT‑ACCTGGTAGGAGCGGGTTCAACCCCGAAGAGGCCCGGTCATGCGCCCCGGAGGGCGGGTTCAACGGGGCGCCGAACCCCCGCGa > 2:3822605/1‑150 (MQ=255) ccAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGTAACCCCACCGACAACGGCCTGTGTAT‑CCCGGGTAGGAGCCGGGTCACCCCCCCAGAGGCCCCGGCAAGCGCCCCCGAGGGCGGGGTCAACGGGGGGCCCAACCCCcccgcc > 2:1171241/1‑148 (MQ=255) ccAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCCCAACAACAAACGCAAGTGTAT‑CCCAGGTAGGCGCGGGGTCACCCCCGCAGAGGCCCCGGCAAGCGCCCCGGAGGGCGGGGTGAGCGGGGCGCCGAAACCCCCCGaa > 2:1171284/1‑150 (MQ=255) cAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGGAGGAGCGGGTTCACCCCCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGGTCATCGGGGCGCCGAACCGCCGCGAAc > 2:2953814/1‑150 (MQ=255) aaTGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACACGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGa < 2:3094318/150‑1 (MQ=255) gggggTTAGGCCAAAAAGCTTCGCGGGTGAACCCCCTCCAACAAGGGCAAGTGTAT‑ACCTGGGAGGAGCGGGTTCAACCGCGAAGAGGCCCGGTCAAGCGCCCCCTAGGGCGGGTTCATAGGGGCGCCGAACCGCCGCGAACAGAACCGa > 2:3227903/1‑150 (MQ=255) gTTCGGCCAAAAAGCTTCGCGGGTGACCCCGCCCCGACCCGGGCTTGTGTAT‑CCCTGGTAGGAGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCaa < 2:1287621/150‑1 (MQ=255) gTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCaa < 2:1676490/150‑1 (MQ=255) gTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCaa < 2:2591111/150‑1 (MQ=255) tAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCGGGTAGGAGCGGGTTCACCCCCGAAGAGGCCCCGTCATGCGCCCCCTAGGGCGGGTTCATCGGGGCCCCGAACCCCCGCGAACAGACCCGAACAAgc > 2:4121057/1‑150 (MQ=38) aaaaaGCTTCGCGGGGGAAACCCCACCGACAAGGGCATGTGTAA‑CCCGGGGAGGAGCGGGTTCACCCGCGAAGAGGCCCCGTCAAGCGCCCCCGAGGGCGGGGTCATCCGGGCGCCCAACCCCCCCCAACAGAACCCATAAAGCGCcgcc > 2:1741552/1‑148 (MQ=255) cgGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGtt < 2:3300881/150‑1 (MQ=255) gggTGAACCCGCTCCTACCAGGG‑ATACACATGCCCTTATAGGAGCGGGTTCACCCGCGAAGCGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTg > 2:3480775/1‑150 (MQ=21) gggTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTg > 1:3649686/1‑150 (MQ=255) gTGACCCCGCCCCTCCACGGGCTTGTGTTT‑CCCTGGTCGGCGCGGGTCCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc < 1:2188382/150‑1 (MQ=255) gTGAACCCGCTCCTACACGGGCTTGTGTAT‑CCCGGGTCGGCGCGGGTTCCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc < 1:1815702/150‑1 (MQ=255) gTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc > 1:3335228/1‑150 (MQ=255) tGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGcc > 1:1592708/1‑150 (MQ=255) gAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCt > 1:2887138/1‑150 (MQ=25) gAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCt > 2:2162750/1‑150 (MQ=25) gAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCt > 1:2886952/1‑150 (MQ=25) ccccGCTCCCCCCCGGGCCGGTGTCG‑CCCCGGCAGGCGCGGGTGCCCCCGCGCCGCGGCCCGGTCCCGCGCCCCGGAGGGCGGGTTCATCGGGGCGCCGAACCCCCGCGACCAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGc < 2:2472679/149‑1 (MQ=255) aCCCGCTCCTACCAGGGCATGTGTAG‑CCCTGGTAGGAGCGGGTTCCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGc < 2:1620023/150‑1 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:2852125/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:3949576/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:3949675/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:1143546/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 1:151179/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:218001/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:2318861/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCAGCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:64488/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTGCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:2852176/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:2095984/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:1049284/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:1351143/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGGAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 1:2096075/1‑150 (MQ=255) gCTCCTACATGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt < 2:1264058/150‑1 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 1:3161428/1‑150 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 1:1500916/1‑150 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 2:204228/1‑150 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 1:3778329/1‑150 (MQ=255) cTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGtttt < 2:2712009/150‑1 (MQ=255) tCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTc > 1:2011264/1‑150 (MQ=255) ccTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCa < 2:1822736/150‑1 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 2:1379214/1‑150 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 1:2066738/1‑150 (MQ=255) cacgggCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGt < 2:2515891/147‑1 (MQ=255) aGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGc > 1:4038358/1‑150 (MQ=255) aGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGc > 1:4038581/1‑150 (MQ=255) aGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGc < 2:2657799/150‑1 (MQ=255) cATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGTGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACg > 2:4222910/1‑150 (MQ=255) tgtgTAT‑CCGTGGTTGGTGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGc < 1:1815143/150‑1 (MQ=255) tgtgTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGc > 2:2090029/1‑150 (MQ=255) tgtgTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGc < 2:2568544/150‑1 (MQ=255) tgtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCaa < 2:369526/150‑1 (MQ=255) gtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 1:778322/1‑150 (MQ=255) gtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 2:1909380/1‑150 (MQ=255) acatgcccTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCaa > 1:1013270/6‑150 (MQ=255) t‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc > 2:2349941/1‑150 (MQ=255) cgggTCGGAGCGGCTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggc < 1:2552537/148‑1 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggcg > 2:3755464/1‑150 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggcg > 2:2525366/1‑150 (MQ=255) | ACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCCAAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCG > NC_002947/5726131‑5726428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |