| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,739,577 | G→C | 10.0% | intergenic (‑154/+48) | hutU ← / ← PP_5034 | urocanate hydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,739,577 | 0 | G | C | 10.0% | 379.3 / 25.5 | 120 | intergenic (‑154/+48) | hutU/PP_5034 | urocanate hydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (58/49); new base C (7/4); total (67/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
AGGTCCTCTGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGAACAACCCCAAC > NC_002947/5739429‑5739724 | aGGTCCTCTGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCcgcgc < 1:1784885/150‑1 (MQ=255) gTCCTCTGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCgcgg < 2:74460/150‑1 (MQ=255) gTCCTCTGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCGTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCgcgg > 1:1109857/1‑150 (MQ=255) ctctGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCgcgggcg < 1:3006851/150‑1 (MQ=255) ctGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGggcggc < 2:355716/150‑1 (MQ=255) gCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGgcgc < 2:2544334/150‑1 (MQ=255) cGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCt < 1:4263527/150‑1 (MQ=255) cGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCt < 2:4093486/150‑1 (MQ=255) cGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCt < 2:1172558/150‑1 (MQ=255) cGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCCCGCGCGGCGCt < 2:2658198/150‑1 (MQ=255) ggTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACATTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCCCGCGCGGCGCTc < 1:1387478/150‑1 (MQ=255) tcCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGAtct > 1:560962/1‑150 (MQ=255) tcCGCGGGCGGGTAGGTCGTGGTCAATATACAAACACACCTTTACGTGGATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGAtct < 2:483461/150‑1 (MQ=255) gccGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGAtct < 2:270692/149‑1 (MQ=255) cgcgGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTca < 1:735231/150‑1 (MQ=255) cgcgGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTca < 1:735175/150‑1 (MQ=255) cgcgGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTca < 1:734981/150‑1 (MQ=255) cgggcgggTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATCGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCCCGCGCGGCGCTCGAtctatac < 2:3609957/150‑5 (MQ=255) gTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCa > 1:2235525/1‑150 (MQ=255) gTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCa > 1:1256742/1‑150 (MQ=255) aTGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGAGCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCaaa > 1:167122/1‑150 (MQ=255) tGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTa < 1:1025967/150‑1 (MQ=255) tGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCAAGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTAGAGATTTATGATGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTa < 2:1472340/150‑1 (MQ=255) cAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGc > 2:2912857/1‑150 (MQ=255) cAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGc < 1:1309552/150‑1 (MQ=255) cAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGc < 1:1309547/150‑1 (MQ=255) aaTATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCACGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGcc > 2:2190003/1‑150 (MQ=255) aaTATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCACGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGcc > 2:2190025/1‑150 (MQ=255) taCAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAAc > 1:2377782/1‑150 (MQ=255) aCAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAAcc > 2:1263199/1‑150 (MQ=255) aaaCACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCtt > 2:2798449/1‑150 (MQ=255) aaaCACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCtt > 1:3646726/1‑150 (MQ=255) aaaCACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCtt > 2:317596/1‑150 (MQ=255) acacacCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCa > 2:3748950/1‑150 (MQ=255) acacacCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCa > 1:1505089/1‑150 (MQ=255) acacacCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCa < 2:271324/150‑1 (MQ=255) acacacCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCa < 2:271434/150‑1 (MQ=255) acCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAgcgc < 2:448409/150‑1 (MQ=255) acCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAgcgc > 2:517177/1‑150 (MQ=255) cTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGccc < 2:2510131/150‑1 (MQ=255) ttGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAg > 2:712669/1‑150 (MQ=255) tatgtaCAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTc < 2:3182582/150‑1 (MQ=255) tatgtaCAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTc < 1:891352/150‑1 (MQ=255) tatgtaCAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGACCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTc > 2:1908882/1‑150 (MQ=255) gtaCAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGAt > 2:3065890/1‑150 (MQ=255) gtaCAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGAt > 1:2239638/1‑150 (MQ=255) gtaCAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGAt > 1:1360634/1‑150 (MQ=255) cAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAg > 2:2388050/1‑150 (MQ=255) cAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAg > 2:527835/1‑150 (MQ=255) aaGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAgg < 1:3996235/150‑1 (MQ=255) aaGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAgg < 2:3445290/150‑1 (MQ=255) aaGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAgg < 2:3445295/150‑1 (MQ=255) aaGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAgg > 2:4371918/1‑150 (MQ=255) gCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGgca < 1:568556/150‑1 (MQ=255) tGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGgcagca > 2:2118927/1‑150 (MQ=255) ggACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCAc < 1:2414909/150‑1 (MQ=255) gACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCAcc > 1:2661089/1‑150 (MQ=255) aCAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCg > 1:2031154/1‑150 (MQ=255) cAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCt > 1:2968765/1‑150 (MQ=255) cAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCt > 1:196339/1‑150 (MQ=255) cAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCt > 1:4326887/1‑150 (MQ=255) cAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCt < 1:3588625/150‑1 (MQ=255) aaaaTAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCTGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTg > 2:2803013/1‑150 (MQ=255) aaaaTAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGgca < 1:3619173/138‑1 (MQ=255) aaaaTAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGgca > 2:3619173/1‑138 (MQ=255) tCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAAcc < 1:2443753/150‑1 (MQ=255) tCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAAcc < 2:3940656/150‑1 (MQ=255) gACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGc < 1:2206264/150‑1 (MQ=255) gACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGc > 2:4314114/1‑150 (MQ=255) cTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGcccc > 1:101547/1‑150 (MQ=255) ccGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCa < 1:655053/150‑1 (MQ=255) ggCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATtcatca < 1:3646238/150‑1 (MQ=255) cTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCAtt < 1:19550/150‑1 (MQ=255) ttGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTg > 1:3373675/1‑150 (MQ=255) ttGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTg > 1:2379150/1‑150 (MQ=255) aTTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTc > 1:40058/1‑150 (MQ=255) aTTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTc > 1:3403197/1‑150 (MQ=255) tATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAg < 2:348533/150‑1 (MQ=255) tGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGcc > 2:2783519/1‑150 (MQ=255) gTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCg < 2:517134/150‑1 (MQ=255) aGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCg > 2:1799312/1‑150 (MQ=255) gATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGa < 2:52144/150‑1 (MQ=255) aTCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaa > 2:61499/1‑150 (MQ=255) aTCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaa > 1:2848255/1‑150 (MQ=255) tCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCACTTCATCATTGCCTTCCAGCCGCAAGCAGTCGaac > 2:4076878/1‑150 (MQ=255) tCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaac > 1:2676162/1‑150 (MQ=255) tCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaac < 1:612598/150‑1 (MQ=255) tCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaac > 1:150526/1‑150 (MQ=255) tCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaac > 1:3353828/1‑150 (MQ=255) tCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaac > 1:1885255/1‑150 (MQ=255) cGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaaca > 2:785773/1‑150 (MQ=255) gAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaacaa > 1:2808082/1‑150 (MQ=255) gAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaacaa > 1:2867293/1‑150 (MQ=255) gAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAAGTCATCATTGCCTTCCAGCCGCAAGCAGTCGaacaa > 2:3202508/1‑150 (MQ=255) gAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCAGTGCCTTCCAGCCGCAAGCAGTCGaacaa > 2:3557695/1‑150 (MQ=255) aGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaacaac > 2:212798/1‑150 (MQ=255) aGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaacaac > 2:497238/1‑150 (MQ=255) gccgcGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGAACAAcccc > 2:135646/1‑150 (MQ=255) gcgcgGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGAACAACCCCAAc < 2:560962/150‑1 (MQ=255) gcgcgGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGAACAACCCCAAc > 1:3421402/1‑150 (MQ=255) | AGGTCCTCTGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGAACAACCCCAAC > NC_002947/5739429‑5739724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |