| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,742,435 | G→A | 17.9% | intergenic (+22/+49) | hutF → / ← PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,742,435 | 0 | G | A | 17.9% | 170.2 / 29.0 | 83 | intergenic (+22/+49) | hutF/PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (6/60); new base A (3/10); total (9/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.01e-02 | |||||||||||
GGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCC > NC_002947/5742288‑5742584 | ggTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGcc < 1:3189540/150‑1 (MQ=255) tGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑t < 2:509423/150‑1 (MQ=255) gCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTc < 1:1405862/150‑1 (MQ=255) gCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTc < 1:1406126/150‑1 (MQ=255) tCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGt < 2:3732754/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCaa < 1:1498093/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCaa < 1:3553383/150‑1 (MQ=255) ggcgcGATGTGAGGGTGAATGGGCAAGGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGccc < 1:1417528/149‑1 (MQ=255) cgcgATGTGATGGTGAAGGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCcgc < 1:3290729/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGTCATGCCCAGGAAGATGTAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGaa < 2:677233/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGaa < 2:61388/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAg < 1:629242/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAg < 1:1420728/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAg < 2:1542162/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAg < 2:2396113/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGGGCTTGCACGCGAAg < 2:3941962/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAg < 1:1595105/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCACCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGATGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAg < 2:76344/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGtt < 1:2298019/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAgggct < 2:1832234/150‑3 (MQ=38) gATGGTGAAGGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACTGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAgggct < 1:817395/150‑3 (MQ=38) ctGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTGTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTg < 2:4457210/149‑1 (MQ=38) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTg < 1:186363/150‑1 (MQ=255) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTg < 1:1529658/150‑1 (MQ=255) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTg < 2:3241986/150‑1 (MQ=38) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTg < 2:2050766/150‑1 (MQ=38) tGGTGACTGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTgc < 1:2661779/150‑1 (MQ=255) tGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTgc < 2:1631963/150‑1 (MQ=255) ggTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTgca < 2:2843716/150‑1 (MQ=255) gTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGGAGGGCTgcaa < 2:4374854/150‑1 (MQ=38) tGAATGGGCACTGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTgcaac < 2:2824006/150‑1 (MQ=38) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGACAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGAGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTgcaac < 2:4499139/150‑1 (MQ=38) gggTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGa < 1:713682/127‑1 (MQ=38) gggTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGa > 2:713682/1‑127 (MQ=38) tgCGCCTGGGGCGGCTTGCCCTGTATGATGAATGCGGGGGGGGTTTTGCCATGTTGTTGCGCCTTG‑TTTTGGGCTGTGCGTACGGGGTTTGCGTTGCAGCCC‑TTGGCGTGCAAGCCCGCGATGGTTTGAAACGCAACCCCAAAAAACTCa < 2:2142590/150‑1 (MQ=255) tgCGCCTGGGGCGGCATGCCCTGGATGAGGACAGGGGGGGGGCGTTTGCCATGGTGTGGCGCCTGG‑TTTTGGGCTGAGGTTACGGGGTTTGCGTTGCAGCCC‑TTGGCGTGAAAGCCCGCGATGGTTTGAAACGCAACCCCAAAAAACTCa < 2:1976364/150‑1 (MQ=255) ccccggggCGGCTTCCCCAGGACTATCAACGCGGGGGGGCGTGGGCCAGGGTGTTGCGCCAGC‑TTTTGGCCTGACGGTCCCGGGTTGGCGTTCCCGCCT‑TTCGGGGGAAAGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTg < 2:3812218/146‑1 (MQ=255) tggggCGGCTTGCCCAGTAAGATTAACGGGGGGGGGCGTTTGCAATGTTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACGGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCAt < 2:2270914/149‑1 (MQ=255) gCCCAGGAAGTTGAACGGGGGCGGGCGTTTGCCATGGTGTTGCGCCAGC‑TTTTGGGATGAGCGTCCGGGGGTTGGGTTGCCGCCC‑TCGGGGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTAttt < 2:4152406/150‑1 (MQ=255) tccAGGAAGATGAACGCGGGCGGGCGTTTGCCATGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGATGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTg < 2:1040430/149‑1 (MQ=255) ccAGGAAGATGAACGGGGGCGGGCGTTTGCCACGGGGTTGCGCACGC‑TTTGGGGCTGCGCGTACGGGGGTTGCGTTGCAGCCC‑TGCGCGTGAAAGCCCGCCACGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGc < 2:3788173/150‑1 (MQ=255) aaGTTGAACGCGGGCGGGGGTTTGCCACGGTGTTGCGCCAGC‑TTTGGGGCTGAGCGTACCGGGGTTGGGTTGCCGCCC‑TTCGCGTGCACGCCCGCGACGGGTGGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATc < 2:840264/150‑1 (MQ=255) atcaacgcgggcggGGTTTTGCAATGTTTTGGCGCAAGC‑TTTTGGGCTGAGCGTACGGGGTTTGCTTTGCACCCC‑TTGGGGTGAACCCCGGCTATGGGTTCAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGa < 2:1503319/144‑1 (MQ=255) tGACAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCTTC‑TTTGGGGCTTAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGACTGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 2:1756725/150‑1 (MQ=255) tGAACGGGGGGGGGGTTTTGCCAGGGTGTTGCGCCAGT‑TTTTGGGGTGAGCGTACCGGGGTTGGGTTGCAGCCC‑TTCGCGGGCATGCCCGGGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 2:4236771/150‑1 (MQ=255) tGAACGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTTAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 2:1756706/150‑1 (MQ=255) gaccgcggggggGGGTTGGCCAGGGTGTTGCGCCTGC‑TTTTGGGCGGCGGGTACGGGGGTGGCGTTGCCGCCC‑TGCGGGTGCAAGCCGGGGATGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAcg < 1:721597/146‑1 (MQ=255) aGCGGGCGGGC‑TTTACCAAAGTTTTTCCCCAACATTTTGGGCTCAGCGAACCGGGGTTGCGTTCCACCCC‑TTCCCCACCAACCCCCCCAAGGCTTCAAACGCAACCCCAAAAAACTCAGTGCATTATTACTATTTGCTGATCGGAcgccc < 2:4282711/150‑1 (MQ=255) ggcgggcgTTTGCCACGGTGTTGCGCCTGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTGGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCa < 2:1401108/150‑1 (MQ=255) gggcgTTTGCCATGGTGTTGCGCCAGC‑TTTTGGGCTGCGCGTCCGGGGGTTGCGTTGCCGCCC‑TGCGCGGGCACGCCCGGGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGAt < 2:2748652/150‑1 (MQ=255) ggTTTGCCATGTTGTTGCGCCAGC‑TTTTGGGCTGTGCGTAGCGGGGGTGCGTTGCAGCCT‑TTCGCGTGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCaa < 2:3792712/149‑1 (MQ=255) ttGCCAAGGTGTTGCGCCAGC‑TTTGGGGCGGCGCTTCCGGGGGTTGGGTTCCAGCCC‑TTCGCGTGCAAGCCCGCCACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCg < 2:3058927/150‑1 (MQ=255) catggTGTTGCGCCAGC‑TTTTGGGCTGAGCGTCCGGGGTTTGGGTTGCAGCCC‑TTCGCGTGAAAGCCCGCTACGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTg < 1:3674923/147‑1 (MQ=255) atggTGTTGCGCCAGC‑TTTTGGGGTGAGCGTACGGGGGTTGGGTTGCCGCCC‑TTCGCGTGAAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTgg < 2:2712341/148‑1 (MQ=255) gcCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TGCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAccc < 2:627125/150‑1 (MQ=255) gcCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGGTGGAGCCCGTTCCGGGCCAACCCCCCGACGGGTGGAAACCAAACCCCAAAAAA‑TCCCTGCCCATTTACTATTTTGAGATAGGACGCCCGCCAGATAAAGCGGCGGGGGTCaaaacc > 2:4456625/1‑145 (MQ=255) aacattttGGGCTGAGCGTACCGGTGTTGCGTTGCAGCCC‑TTCGCGTGAAAGCCCCCCAAGGTTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCct < 1:358635/146‑1 (MQ=255) aGC‑TTTTGTGCTGCGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGATGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctg < 2:1988637/150‑1 (MQ=255) cgtttttGGGCTGTGGTTACGGGGGTTGGGTTGCAGCCC‑TTCGCGGCCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCTGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctg < 2:2267103/147‑1 (MQ=255) gcatttGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctgc < 2:3605988/147‑1 (MQ=255) cTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGcc < 2:4074722/150‑1 (MQ=255) cTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGcc < 2:3760382/150‑1 (MQ=255) gAGCGTACCGGGGTTGCGTTGCCGCCC‑TGCGCGTGCACGCCCGCGACGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCt < 2:3071495/150‑1 (MQ=255) cgCGTCCCGGGGTTGCGTCGCCCCCC‑TCCGCCTGCCCGCCCGCCAAGGCTCCCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTg < 1:4390576/149‑1 (MQ=255) gggacgggggTTGGGTGGCCGCCC‑TTCGCGTGAAAGCCCGCGATGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGa < 2:1558962/144‑1 (MQ=255) cttACGGGGTTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGa < 2:3048340/148‑1 (MQ=255) cgtagggggtTTGGGTTGCCGCCC‑TTCGCGGGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGa < 2:767317/144‑1 (MQ=255) cGTACCGGGGTTGGTTTGCAGCCC‑TTCGCGTCCAAGCCCGCTAAGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGa < 2:3048264/150‑1 (MQ=255) tACGGGGGTTGCTTTGCAGCCG‑TTCGCGGGCACGCCCGCTATGGTTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 1:1035143/150‑1 (MQ=255) tACCGGGGTGGCGTGGCAGCCG‑TTCGGGTGCACGCCCGCTACGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 1:3324078/150‑1 (MQ=255) ccGGGGTTGCGTTGCCGCCC‑TTCGCGTGCAACCCCGCTAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGTACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagc < 1:1066556/150‑1 (MQ=255) cgttgcCGCCG‑TTCGCGTGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCa < 1:2613017/150‑1 (MQ=255) cgttgcAGCCC‑TTCGCGTGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCa < 2:611736/150‑1 (MQ=255) cgttgcAGCCC‑TTCGCGTGCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCa < 1:2612914/150‑1 (MQ=255) cgttgcAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCa > 2:1430418/1‑150 (MQ=255) tttgcACCCG‑TACGGGTGCTAGCCAGCGATGGGTTTAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCAc < 1:2953506/149‑1 (MQ=255) gttgcAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCAc > 2:112673/1‑150 (MQ=38) ttgcAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 1:3576815/1‑150 (MQ=255) ttgcAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 2:4302746/1‑150 (MQ=38) gcAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 2:2617783/1‑150 (MQ=255) cAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTc > 2:3306598/1‑150 (MQ=255) cAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTc > 2:766582/1‑150 (MQ=255) aGCCC‑TTCGCGTGCAAGCCCGCTAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc < 2:1082782/150‑1 (MQ=255) gCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACCGCAGGTTCTCACGCTccc > 2:3042291/1‑150 (MQ=255) gCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc > 2:2765092/1‑150 (MQ=255) gCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc > 2:1818092/1‑150 (MQ=255) gCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGGTCTCACGCTccc > 2:3042018/1‑150 (MQ=255) | GGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCC > NC_002947/5742288‑5742584 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |