| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,742,449 | A→T | 29.2% | intergenic (+36/+35) | hutF → / ← PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,742,449 | 0 | A | T | 29.2% | 100.6 / 90.0 | 112 | intergenic (+36/+35) | hutF/PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (23/45); new base T (18/14); total (41/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.92e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.52e-03 | |||||||||||
Only 100 of 115 total aligned reads displayed.
CAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTC > NC_002947/5742300‑5742598 | cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCaa < 1:3553383/150‑1 (MQ=255)cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCaa < 1:1498093/150‑1 (MQ=255) ggcgcGATGTGAGGGTGAATGGGCAAGGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGccc < 1:1417528/149‑1 (MQ=255) cgcgATGTGATGGTGAAGGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCcgc < 1:3290729/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGTCATGCCCAGGAAGATGTAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGaa < 2:677233/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGaa < 2:61388/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAg < 1:1420728/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAg < 2:1542162/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAg < 2:2396113/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAg < 1:1595105/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCACCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGATGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAg < 2:76344/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGtt < 1:2298019/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAgggct < 2:1832234/150‑3 (MQ=38) gATGGTGAAGGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACTGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAgggct < 1:817395/150‑3 (MQ=38) ctGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTGTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTg < 2:4457210/149‑1 (MQ=38) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTg < 1:186363/150‑1 (MQ=255) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTg < 1:1529658/150‑1 (MQ=255) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTg < 2:2050766/150‑1 (MQ=38) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTg < 2:3241986/150‑1 (MQ=38) tGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTgc < 2:1631963/150‑1 (MQ=255) ggTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTgca < 2:2843716/150‑1 (MQ=255) tGAATGGGCACTGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTgcaac < 2:2824006/150‑1 (MQ=38) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGACAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGAGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTgcaac < 2:4499139/150‑1 (MQ=38) gggTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCC‑TTCGCGGGCTTGCACGCGa < 1:713682/127‑1 (MQ=38) tgCGCCTGGGGCGGCTTGCCCTGTATGATGAATGCGGGGGGGGTTTTGCCATGTTGTTGCGCCTTG‑TTTTGGGCTGTGCGTACGGGGTTTGCGTTGCAGCCC‑TTGGCGTGCAAGCCCGCGATGGTTTGAAACGCAACCCCAAAAAACTCa < 2:2142590/150‑1 (MQ=255) tgCGCCTGGGGCGGCATGCCCTGGATGAGGACAGGGGGGGGGCGTTTGCCATGGTGTGGCGCCTGG‑TTTTGGGCTGAGGTTACGGGGTTTGCGTTGCAGCCC‑TTGGCGTGAAAGCCCGCGATGGTTTGAAACGCAACCCCAAAAAACTCa < 2:1976364/150‑1 (MQ=255) ccccggggCGGCTTCCCCAGGACTATCAACGCGGGGGGGCGTGGGCCAGGGTGTTGCGCCAGC‑TTTTGGCCTGACGGTCCCGGGTTGGCGTTCCCGCCT‑TTCGGGGGAAAGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTg < 2:3812218/146‑1 (MQ=255) tggggCGGCTTGCCCAGTAAGATTAACGGGGGGGGGCGTTTGCAATGTTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACGGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCAt < 2:2270914/149‑1 (MQ=255) gCCCAGGAAGTTGAACGGGGGCGGGCGTTTGCCATGGTGTTGCGCCAGC‑TTTTGGGATGAGCGTCCGGGGGTTGGGTTGCCGCCC‑TCGGGGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTAttt < 2:4152406/150‑1 (MQ=255) ccAGGAAGATGAACGGGGGCGGGCGTTTGCCACGGGGTTGCGCACGC‑TTTGGGGCTGCGCGTACGGGGGTTGCGTTGCAGCCC‑TGCGCGTGAAAGCCCGCCACGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGc < 2:3788173/150‑1 (MQ=255) atcaacgcgggcggGGTTTTGCAATGTTTTGGCGCAAGC‑TTTTGGGCTGAGCGTACGGGGTTTGCTTTGCACCCC‑TTGGGGTGAACCCCGGCTATGGGTTCAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGa < 2:1503319/144‑1 (MQ=255) tGACAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCTTC‑TTTGGGGCTTAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGACTGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 2:1756725/150‑1 (MQ=255) tGAACGGGGGGGGGGTTTTGCCAGGGTGTTGCGCCAGT‑TTTTGGGGTGAGCGTACCGGGGTTGGGTTGCAGCCC‑TTCGCGGGCATGCCCGGGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 2:4236771/150‑1 (MQ=255) tGAACGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTTAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 2:1756706/150‑1 (MQ=255) gaccgcggggggGGGTTGGCCAGGGTGTTGCGCCTGC‑TTTTGGGCGGCGGGTACGGGGGTGGCGTTGCCGCCC‑TGCGGGTGCAAGCCGGGGATGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAcg < 1:721597/146‑1 (MQ=255) aGCGGGCGGGC‑TTTACCAAAGTTTTTCCCCAACATTTTGGGCTCAGCGAACCGGGGTTGCGTTCCACCCC‑TTCCCCACCAACCCCCCCAAGGCTTCAAACGCAACCCCAAAAAACTCAGTGCATTATTACTATTTGCTGATCGGAcgccc < 2:4282711/150‑1 (MQ=255) ggcgggcgTTTGCCACGGTGTTGCGCCTGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTGGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCa < 2:1401108/150‑1 (MQ=255) gggcgTTTGCCATGGTGTTGCGCCAGC‑TTTTGGGCTGCGCGTCCGGGGGTTGCGTTGCCGCCC‑TGCGCGGGCACGCCCGGGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGAt < 2:2748652/150‑1 (MQ=255) ggTTTGCCATGTTGTTGCGCCAGC‑TTTTGGGCTGTGCGTAGCGGGGGTGCGTTGCAGCCT‑TTCGCGTGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCaa < 2:3792712/149‑1 (MQ=255) ttGCCAAGGTGTTGCGCCAGC‑TTTGGGGCGGCGCTTCCGGGGGTTGGGTTCCAGCCC‑TTCGCGTGCAAGCCCGCCACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCg < 2:3058927/150‑1 (MQ=255) catggTGTTGCGCCAGC‑TTTTGGGCTGAGCGTCCGGGGTTTGGGTTGCAGCCC‑TTCGCGTGAAAGCCCGCTACGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTg < 1:3674923/147‑1 (MQ=255) atggTGTTGCGCCAGC‑TTTTGGGGTGAGCGTACGGGGGTTGGGTTGCCGCCC‑TTCGCGTGAAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTgg < 2:2712341/148‑1 (MQ=255) gcCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TGCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAccc < 2:627125/150‑1 (MQ=255) gcCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGGTGGAGCCCGTTCCGGGCCAACCCCCCGACGGGTGGAAACCAAACCCCAAAAAA‑TCCCTGCCCATTTACTATTTTGAGATAGGACGCCCGCCAGATAAAGCGGCGGGGGTCaaaacc > 2:4456625/1‑145 (MQ=255) aacattttGGGCTGAGCGTACCGGTGTTGCGTTGCAGCCC‑TTCGCGTGAAAGCCCCCCAAGGTTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCct < 1:358635/146‑1 (MQ=255) cgtttttGGGCTGTGGTTACGGGGGTTGGGTTGCAGCCC‑TTCGCGGCCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCTGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctg < 2:2267103/147‑1 (MQ=255) gcatttGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctgc < 2:3605988/147‑1 (MQ=255) cTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGcc < 2:3760382/150‑1 (MQ=255) cTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGcc < 2:4074722/150‑1 (MQ=255) gAGCGTACCGGGGTTGCGTTGCCGCCC‑TGCGCGTGCACGCCCGCGACGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCt < 2:3071495/150‑1 (MQ=255) cgCGTCCCGGGGTTGCGTCGCCCCCC‑TCCGCCTGCCCGCCCGCCAAGGCTCCCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTg < 1:4390576/149‑1 (MQ=255) cttACGGGGTTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGa < 2:3048340/148‑1 (MQ=255) cgtagggggtTTGGGTTGCCGCCC‑TTCGCGGGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGa < 2:767317/144‑1 (MQ=255) cGTACCGGGGTTGGTTTGCAGCCC‑TTCGCGTCCAAGCCCGCTAAGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGa < 2:3048264/150‑1 (MQ=255) tACGGGGGTTGCTTTGCAGCCG‑TTCGCGGGCACGCCCGCTATGGTTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 1:1035143/150‑1 (MQ=255) tACCGGGGTGGCGTGGCAGCCG‑TTCGGGTGCACGCCCGCTACGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 1:3324078/150‑1 (MQ=255) ccGGGGTTGCGTTGCCGCCC‑TTCGCGTGCAACCCCGCTAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGTACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagc < 1:1066556/150‑1 (MQ=255) cgttgcCGCCG‑TTCGCGTGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCa < 1:2613017/150‑1 (MQ=255) cgttgcAGCCC‑TTCGCGTGCACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCa < 2:611736/150‑1 (MQ=255) cgttgcAGCCC‑TTCGCGTGCAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCa < 1:2612914/150‑1 (MQ=255) cgttgcAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCa > 2:1430418/1‑150 (MQ=255) tttgcACCCG‑TACGGGTGCTAGCCAGCGATGGGTTTAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCAc < 1:2953506/149‑1 (MQ=255) gttgcAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCAc > 2:112673/1‑150 (MQ=38) ttgcAACCC‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 2:4302746/1‑150 (MQ=38) cAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTc > 2:766582/1‑150 (MQ=255) aaccc‑TTCGCGGGCTTGCACGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTGTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 1:2573345/3‑150 (MQ=39) aaccc‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCgg > 2:772865/3‑79 (MQ=18) aaccc‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCgg < 1:772865/77‑1 (MQ=18) aaccc‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 2:2652738/3‑150 (MQ=38) aaccc‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 1:1244071/3‑150 (MQ=38) aaccc‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGGGCCTTTGTACTATTTGCTGAGCGGACGCCCGCCAGATCACGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGCCAGCAGGTTCTCACGCTcc > 2:3228715/3‑150 (MQ=37) aGCCC‑TTCGCGTGCAAGCCCGCTAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc < 2:1082782/150‑1 (MQ=255) gCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACCGCAGGTTCTCACGCTccc > 2:3042291/1‑150 (MQ=255) gCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc > 2:2765092/1‑150 (MQ=255) gCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc > 2:1818092/1‑150 (MQ=255) ccc‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCa > 1:76295/1‑150 (MQ=255) cc‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 1:3525960/1‑150 (MQ=255) cc‑TTCGCGGGCTTGCACGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 2:2869594/1‑150 (MQ=255) cc‑TTCGCGGGCTTGCACGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 1:2296377/1‑150 (MQ=255) cc‑TTCGCGGGCTTGCACGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 1:1621767/1‑150 (MQ=255) c‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:3416090/1‑150 (MQ=255) c‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:1557101/1‑150 (MQ=255) c‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:1733582/1‑150 (MQ=39) c‑TTCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:4102385/1‑150 (MQ=39) ttCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 1:807269/1‑150 (MQ=255) ttCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 2:789518/1‑150 (MQ=255) ttCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 2:789352/1‑150 (MQ=255) ttCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 1:1520176/1‑150 (MQ=255) ttCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTGTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 1:4518513/1‑150 (MQ=255) ttCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCGAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 1:3180469/1‑150 (MQ=39) ttCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 2:4167726/1‑150 (MQ=39) ttCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 1:3081531/1‑150 (MQ=39) ttCGCGGGCGTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCCATTTTACTATTTGCTGATCGGACACCCGCCAGATCAAGCGGCGGGTGTCATACCCCTGCTGCCGCGCCCGGGACAGCAGGTTCTCACGCGCCCAGGc > 1:3726878/1‑150 (MQ=255) tCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 1:1575384/1‑150 (MQ=255) tCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 1:4185346/1‑150 (MQ=255) tCGCGGGCTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc < 1:1733582/150‑1 (MQ=39) gTGCACGCCGGCGAGGGGTTCCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCa < 1:3663430/150‑1 (MQ=255) tGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAg > 1:264488/1‑150 (MQ=255) gCAAGCCCGCGAAGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAgt < 2:1045429/150‑1 (MQ=255) aGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTc > 2:2388941/1‑150 (MQ=255) | CAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGC‑TTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCC‑TTCGCGTGCAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTC > NC_002947/5742300‑5742598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |