| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 403,299 | T→A | 5.3% | intergenic (‑99/+70) | msrA ← / ← PP_0337 | peptide methionine sulfoxide reductase MsrA/sensory box protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 403,299 | 0 | T | A | 5.3% | 493.3 / 13.5 | 150 | intergenic (‑99/+70) | msrA/PP_0337 | peptide methionine sulfoxide reductase MsrA/sensory box protein |
| Reads supporting (aligned to +/- strand): ref base T (86/56); new base A (3/5); total (89/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.09e-01 | |||||||||||
Only 100 of 154 total aligned reads displayed.
CGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTAGC > NC_002947/403150‑403448 | cGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGTCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGtt < 2:4355207/150‑1 (MQ=255)cGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGtt > 2:4396676/1‑150 (MQ=255) gCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTc < 1:2733150/150‑1 (MQ=255) gTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCtg < 1:906243/150‑1 (MQ=255) tGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCtgt < 2:2260368/150‑1 (MQ=255) tGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCtgt < 2:2645965/150‑1 (MQ=255) tGACGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGAACACCACAACCTTTGAAACCTGTGCTGTACCTGTGGGa < 1:2470481/150‑1 (MQ=17) gACGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGAACACCACAACCTTTGAAACCTGTGCTGTACCTGTGGGAg < 2:313878/150‑1 (MQ=17) gACGTTTTTGTTCACCAGGATTTCCGAACGAAGGACCATGGCAGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCGCACGTTTCAAAGGTTGTGGTGTTACTGTGGGTGCg > 1:3450973/1‑150 (MQ=39) aCGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCgg < 2:1255609/150‑1 (MQ=255) aCGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCgg < 2:1255647/150‑1 (MQ=255) cttttttGTACACCTGTATTTCGGAACGCAGTACCTTGGCCGTTCCTATGTGTTTATGCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCggg < 1:347522/148‑1 (MQ=37) gTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGc < 2:3672769/150‑1 (MQ=255) gTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGc > 2:3573576/1‑150 (MQ=255) ttGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGc < 1:2299515/150‑1 (MQ=255) ttGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGc < 1:1938178/150‑1 (MQ=255) gTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCCTGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGccc > 1:2042111/1‑150 (MQ=255) ttCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTGTTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTGTCAAAGGTTGTGGTGTTCCTGTGGGCGCGGGCGTGCCcg > 2:3740494/1‑150 (MQ=255) aCCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGa > 2:180876/1‑150 (MQ=255) aCCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCGGTGGGAGCGGGCGTGCCCGCGa > 2:2469071/1‑150 (MQ=255) cAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGaaa > 2:2757016/1‑150 (MQ=255) aGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATTCCCGCTCCCACAGGTACAGCACCGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAg > 1:1999375/1‑150 (MQ=255) aGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAg > 1:46593/1‑150 (MQ=255) aGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAg > 1:632825/1‑150 (MQ=255) gAACGCAGGCCCATGGCCGGTCCTCTGTGTTTATGCAGTGGGGGAGGGGTTGGGGCC‑‑GTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGGTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAAt < 2:1421942/150‑1 (MQ=37) aaCGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATg > 2:1072617/1‑150 (MQ=255) aaCGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATg > 1:3260434/1‑150 (MQ=255) aCGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATgg < 2:4277359/150‑1 (MQ=255) gCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCt < 2:700216/150‑1 (MQ=255) aGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTc > 2:3014782/1‑150 (MQ=255) aGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGGTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTc < 2:3867152/150‑1 (MQ=255) gACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATTCCCGCTCCCAAAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCCCGAAAGGGCCCCAATGGCttaaa > 1:3204815/1‑147 (MQ=39) gACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCta < 2:3702320/150‑1 (MQ=255) gACCATGGCCGTTCCTCTGTGTTTATTCAGGGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCta > 2:121283/1‑150 (MQ=255) ccATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTGGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCtata < 2:1360249/150‑1 (MQ=255) cATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAg > 2:1704407/1‑150 (MQ=255) ccTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGa < 2:3012036/150‑1 (MQ=255) tctGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGAtt > 2:2458197/1‑150 (MQ=255) tctGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGAtt > 2:2591727/1‑150 (MQ=255) ctGTGTTTATTCTGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTa < 2:1231213/150‑1 (MQ=255) tgtgTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTAc > 1:3375111/1‑150 (MQ=255) tgtgTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTAc > 2:1566091/1‑150 (MQ=255) ttATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGGGTTCCTGGGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCGGCTATAGTGCCCGAGGATTACGCAGc > 2:2627891/1‑150 (MQ=255) cggggggTCGGGGTTGGGGCC‑‑TTCGGGGGCATGCCCGCTCCCCCAGGTACAGCACCGGTTCCAATGGTTGTGGTGTTCGTGTGGGCGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAg < 1:3941727/147‑1 (MQ=255) aGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAg > 1:2906667/1‑150 (MQ=255) aGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAg > 1:4054373/1‑150 (MQ=255) aGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAg > 2:323403/1‑150 (MQ=255) aGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCAAGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGATCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTGCTATAGAGCCCGAGGATTACGCAGCTGTCAg > 2:2046365/1‑150 (MQ=255) gTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGGTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCGATAGTGCCCGAGGATTACGCAGCTGTCAgg > 1:2191844/1‑150 (MQ=255) tGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGGACCGCCCAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGCACGGGCCCGAATGGCGTCTATAGTGCCCGTGGATTACGCAGCGGTCAGGc > 1:4420213/1‑150 (MQ=38) gTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGGACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATATTGCCCGAGGATTACGCAGCTGTCAGGCCAcc > 1:998369/1‑150 (MQ=255) gTAGGGGTTGGGGCC‑‑TTCGCGGGCAGGCCCGCGCCCCCCGGGACAGCCCAGGGTGCAACGGTTGTGGGGGTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATCGGGCCCGAGGATTTCGCCGCTGTCAGGCCAcc < 2:2869957/150‑1 (MQ=255) gggTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGc > 1:1026398/1‑150 (MQ=255) ggTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGcc < 2:1874691/150‑1 (MQ=255) gTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCa < 2:682348/150‑1 (MQ=255) cc‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCACGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGAt > 1:2575366/1‑150 (MQ=255) ctcggggggCTTGCCCGCCCCCCCAGGTACAGCACAGGTTACACCGGTTGTGGTGTTCCTGTGGGAGGGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATa < 1:3803702/144‑1 (MQ=255) ggagcgGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCGGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAg > 2:3686181/4‑150 (MQ=255) cgGGCAGGCCCGCTCCCACAGGTACCGCACCGGTTCCAAAGGGTGGGGTGTTCCTGTGGGCGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGGGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCt < 2:101311/150‑1 (MQ=255) ctggCCCGCGCCCACTGTTACAGCACTGGTTTCACCGGTTGTGGTGTTCCTGTGGGTGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAg < 1:1217942/147‑1 (MQ=255) aTGCCCGCTCCCCCAGGTACAGCACAGGTTCCAACGGTTGTGGGGTTCCTGTGGGAGCGGGGGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGc < 2:910465/150‑1 (MQ=255) aTGCCCGCTCCCACAGGTACAGCACAGGTTTCACAGGGTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCGTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGc > 2:1698191/1‑150 (MQ=255) aTGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGc > 2:2660838/1‑150 (MQ=255) gCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCg > 1:1008504/1‑150 (MQ=255) ccGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCt > 1:925988/1‑150 (MQ=255) ccGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCt > 1:2141951/1‑150 (MQ=255) ccGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCt > 1:867643/1‑150 (MQ=255) cGCTCCCACAGGTACAGCACAGGTTTCAACGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTc < 1:2732257/150‑1 (MQ=255) gCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCg > 2:1658374/1‑150 (MQ=255) gCTCCCACAGGAACACCACAACCTTTGAAACCTGTGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCg > 2:3213966/1‑150 (MQ=21) cTCCCACAGGAACACCACAACCTTTGAAACCTGTGCTGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCgg > 1:3388624/1‑150 (MQ=18) ccACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCa > 1:3096991/1‑150 (MQ=255) acaGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGt > 2:2484623/1‑150 (MQ=255) acaGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGt > 2:3144529/1‑150 (MQ=255) ggTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTcg > 1:1343480/1‑150 (MQ=255) tACAGCCCTGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTcgcg < 1:2307657/150‑1 (MQ=255) tACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTcgcg > 2:3536498/1‑150 (MQ=255) gCACAGGTTTCAATGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCg < 1:3107506/150‑1 (MQ=255) gCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCg < 2:2721780/150‑1 (MQ=255) acaGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCggg > 2:3787123/1‑150 (MQ=255) acaGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCggg > 1:1673241/1‑150 (MQ=255) cggTTTCAACGGGTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGaa < 1:2227649/149‑1 (MQ=255) gTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTc > 1:2051527/1‑137 (MQ=255) gTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGATCGCGCCCGGGAATc > 2:2292303/1‑150 (MQ=255) ttCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCgg < 1:1566091/150‑1 (MQ=255) tCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGc > 1:1654150/1‑150 (MQ=255) tCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGc > 1:294841/1‑150 (MQ=255) tCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGc > 2:2536283/1‑150 (MQ=255) aaaGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCg > 1:180463/1‑150 (MQ=255) aaaGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCg > 1:4175459/1‑150 (MQ=255) ggTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTc < 1:4349116/150‑1 (MQ=255) gTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCg > 2:3726053/1‑150 (MQ=255) gTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCg > 1:3259704/1‑150 (MQ=255) gtggtgTTCCTGGGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAAc < 1:2639130/150‑1 (MQ=255) gtgtTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAgg < 1:2469071/150‑1 (MQ=255) gtgtTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAgg < 2:4132892/150‑1 (MQ=255) tgtTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGt > 2:2187886/1‑150 (MQ=255) gtTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTa > 1:2900935/1‑150 (MQ=255) ttCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTAg > 2:2083430/1‑150 (MQ=255) tCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCGTCGATAGTGCCGGAGGAGTACGCCGCTGTCTGGCCACCGGGCCACGCGGATAGCGCGTCAGCCGCTCGGCCCGTTCGCGCCCGGGTCGCGGCCGGGCGAACAGGTAGc > 1:3233917/1‑150 (MQ=255) | CGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAGGACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCC‑‑TTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGTTGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGCCGCTCGGCCAGTTCGCGCCCGGGAATCGGCCGGTCGAACAGGTAGC > NC_002947/403150‑403448 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |