| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,779,381 | A→C | 5.4% | intergenic (+22/+21) | betA‑II → / ← PP_5065 | choline dehydrogenase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,779,381 | 0 | A | C | 5.4% | 772.1 / 22.6 | 222 | intergenic (+22/+21) | betA‑II/PP_5065 | choline dehydrogenase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (113/96); new base C (3/9); total (116/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.27e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 225 total aligned reads displayed.
TGATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTGGCGCCT > NC_002947/5779232‑5779529 | tGATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCa > 1:1153696/1‑150 (MQ=255)tGATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCa < 1:230746/150‑1 (MQ=255) gATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAg < 2:4467330/150‑1 (MQ=255) aTCGCCGAGAAGATTTCGGACAAGAGCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGc < 2:1147508/150‑1 (MQ=255) tCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCg > 2:3107722/1‑150 (MQ=255) cGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCgg < 1:1982811/150‑1 (MQ=255) cGAGAAGATTTCTGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCTAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCTGCGCGGccc < 2:3469284/150‑1 (MQ=255) cGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGccc < 2:1816917/150‑1 (MQ=255) gagaAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGcccc > 2:4032904/1‑150 (MQ=255) aagaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCTGCGCGGCCCCtga < 2:2873584/150‑3 (MQ=255) aagaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCttt < 2:761559/150‑1 (MQ=255) agaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTc < 1:44628/150‑1 (MQ=255) agaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTc < 1:2897174/150‑1 (MQ=255) gaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGTGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCa > 2:519290/1‑150 (MQ=255) gaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCa > 1:4352170/1‑150 (MQ=255) tttCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACg > 2:1270244/1‑150 (MQ=255) tttCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATAAGGGGCCGCTGCGCGGCCCCtgatcaa < 2:2887878/150‑7 (MQ=255) cGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGttt < 2:1606758/150‑1 (MQ=255) gACAATATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGc > 2:3813565/1‑150 (MQ=255) gACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCTGCGCGGCCCCtga < 1:4243710/141‑3 (MQ=255) cAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTGTCACGTTTGCTc > 1:3860077/1‑150 (MQ=255) gATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAgg > 2:792912/1‑150 (MQ=255) cGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCggg > 1:2069329/1‑150 (MQ=255) gTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGc < 1:2156812/150‑1 (MQ=255) gTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGc > 2:4098071/1‑150 (MQ=255) gTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAgc < 1:308535/150‑1 (MQ=255) tGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAAtgtg > 2:3235178/1‑150 (MQ=255) gCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTgc < 2:2479281/150‑1 (MQ=255) gCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTgc < 2:4358712/150‑1 (MQ=255) gcgcAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCa > 1:1341720/1‑150 (MQ=255) gcaCCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAAc < 2:3447117/150‑1 (MQ=255) cccccGCCACGTAGTACTTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCATGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAAc > 1:2693373/4‑150 (MQ=255) caCCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACg > 2:1906371/1‑150 (MQ=255) cccGCCACGTAGTACTTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGa > 2:1433780/2‑150 (MQ=255) ccGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGaa < 1:2587722/150‑1 (MQ=255) cGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAat > 2:3980987/1‑150 (MQ=255) gCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGACGTGAAGCAGGGCTGTGGCCTTGTTCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatc > 1:1489852/1‑150 (MQ=255) ccAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatca > 2:1639520/1‑150 (MQ=255) ccAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatca > 2:522213/1‑150 (MQ=255) ccAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatca > 2:1723727/1‑150 (MQ=255) cAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatcat > 1:1920168/1‑150 (MQ=255) aattacttcGTGGCGGGGGATGCACCTGTGAAAGGCATGCCGATGCTTGTAGTGAAACAGGGATGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatcatc < 1:1116670/147‑1 (MQ=255) tactacGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTc < 1:4438287/150‑1 (MQ=255) tactacGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCCCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTc < 2:1055246/150‑1 (MQ=255) tacGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGac > 1:217182/1‑150 (MQ=255) tacGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGac > 1:58736/1‑150 (MQ=255) cGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGacac > 1:2801143/1‑150 (MQ=255) cGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGacac < 1:1811752/150‑1 (MQ=255) cGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGacac < 1:3251245/150‑1 (MQ=255) ggCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCa < 2:2158639/150‑1 (MQ=255) aTGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGcccc < 1:3413830/150‑1 (MQ=255) aTGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGcccc < 2:233466/150‑1 (MQ=255) aTGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGcccc < 1:2935009/150‑1 (MQ=255) gCAACAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGc < 1:4012982/150‑1 (MQ=255) aCCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCa > 1:840864/1‑150 (MQ=255) aCCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCa < 1:4233347/150‑1 (MQ=255) aCCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCACCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCa > 1:4075231/1‑150 (MQ=255) ccAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAg > 2:68510/1‑150 (MQ=255) tGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGcc > 2:2831502/1‑150 (MQ=255) tGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGcc > 2:1881683/1‑150 (MQ=255) gAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCt < 2:1202949/150‑1 (MQ=255) aaaGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGACTCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTg > 1:485327/1‑150 (MQ=255) aaaGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTg < 2:4229893/150‑1 (MQ=255) aaaGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTg > 1:236836/1‑150 (MQ=255) aaGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTgg < 2:3007769/150‑1 (MQ=255) aGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGc > 2:2807511/1‑150 (MQ=255) aGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGc > 1:3636329/1‑150 (MQ=255) gCAAGCCGATGCGTGAAGTGACACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGa < 2:3615842/150‑1 (MQ=255) cAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGAt < 1:1906371/150‑1 (MQ=255) aaGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATc < 1:2855268/150‑1 (MQ=255) aaGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATc > 1:3003156/1‑150 (MQ=255) aaGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATc > 1:1599358/1‑150 (MQ=255) aGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCg < 1:372894/150‑1 (MQ=255) aGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCg < 2:3260547/150‑1 (MQ=255) aGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCg > 2:3309180/1‑150 (MQ=255) cGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGaac < 2:4275708/150‑1 (MQ=255) cGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGaac < 1:178868/150‑1 (MQ=255) gCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACt < 1:1838866/150‑1 (MQ=255) gtgaagtgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGt > 1:890522/1‑150 (MQ=255) gtgaagtgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGt > 1:4293138/1‑150 (MQ=255) aagtgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCt < 1:4189721/150‑1 (MQ=255) tgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCtgtg > 1:3153147/1‑150 (MQ=255) gaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTgc < 1:718129/150‑1 (MQ=255) aGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCAtt < 2:772558/150‑1 (MQ=255) gCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCTTGGCGATCGAACAACTGTCCTGTGCGCATTTca > 2:2280803/1‑150 (MQ=255) gCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTcacgcacg < 1:1270244/150‑1 (MQ=255) ccTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCGTTTCACGCACgg > 2:3353562/1‑150 (MQ=255) cTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGc < 2:587082/150‑1 (MQ=255) ttGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGcc > 2:1032967/1‑150 (MQ=255) tgaaaGGGGCCGCTGCGCGGCCCCTTTCACGTTTGCACAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAAAAATCCACGAAACCCAGACGCCCCGCCACCGCCTGGCGATCGAACAACTTTCCTGTGCCCATTTAACCCACGGCCta > 1:2470619/5‑149 (MQ=255) aTCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTc < 1:404655/150‑1 (MQ=255) aTCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTc < 2:943738/150‑1 (MQ=255) aTCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATACTCGACACCCAGTCGCCACGCCAGCGCCTGGCTATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTc < 1:1225354/150‑1 (MQ=255) aaaGGGGCCGCTGCGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTcc > 2:2819419/3‑150 (MQ=255) ggCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCt < 2:2069329/150‑1 (MQ=255) gCCGCGCAGCGGCCCCTTTCACGTTTGCTCTGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTg > 1:3759439/1‑150 (MQ=255) gCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTg < 2:3705516/150‑1 (MQ=255) gCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTg > 1:3596691/1‑150 (MQ=255) ccGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTgg > 1:1449346/1‑150 (MQ=255) cAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTGGCGCCt < 1:1187973/150‑1 (MQ=255) | TGATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCTGGCGCCT > NC_002947/5779232‑5779529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |