BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,800,705	G→T	5.0%	P379H (CCT→CAT) ‡	PP_5077 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,800,705	0	G	T	5.0%	823.4 / 21.1	237	P379H (CCT→CAT) ‡	PP_5077	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (111/114); new base T (6/6); total (117/120)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 268 total aligned reads displayed.

CTGGTTTTTCGGCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACC  >  NC_002947/5800556‑5800854

cTGGTTTTTCGGCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGgcaggcgcag                                                                                                                                                       >  1:1777955/1‑150 (MQ=255)

 tGGTTTTTCGGCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGgcaggcgcagg                                                                                                                                                      <  1:3117055/150‑1 (MQ=255)

 tGGTTTTTCGGCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGgcaggcgcagg                                                                                                                                                      <  2:4329874/150‑1 (MQ=255)

 tGGTTTTTCGGCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGgcaggcgcagg                                                                                                                                                      >  1:2389352/1‑150 (MQ=255)

 tGGTTTTTCGGCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTAGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGgcaggcgcagg                                                                                                                                                      >  2:4043956/1‑150 (MQ=255)

  ggTTTTTCGGCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGgcaggcgcaggc                                                                                                                                                     <  2:457961/150‑1 (MQ=255)

     ttttCGGCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGcc                                                                                                                                                  >  1:2660138/1‑150 (MQ=255)

         cGGCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACTGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGCCCGGCGCCTGCGcctgcc                                                                                                                                              <  1:2353346/150‑5 (MQ=255)

           gCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCa                                                                                                                                            >  1:1598475/1‑150 (MQ=255)

           gCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCa                                                                                                                                            >  1:823474/1‑150 (MQ=255)

           gCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCa                                                                                                                                            <  2:2401516/150‑1 (MQ=255)

             aGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGCCCGGCGCCTGCGCCTGCCCAGc                                                                                                                                          <  1:445589/150‑1 (MQ=255)

             aGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGCCCGGCGCCTGCGCCTGCCCAGc                                                                                                                                          <  1:3721750/150‑1 (MQ=255)

              gCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGcc                                                                                                                                         >  2:3126481/1‑150 (MQ=255)

               cTTTGGCAGCCGGCTTGGCCACGGCGACCT‑GGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCgg                                                                                                                                       >  2:1054987/1‑150 (MQ=255)

                tttGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCgg                                                                                                                                       >  1:2617956/1‑150 (MQ=255)

                     cAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCacac                                                                                                                                  >  1:1590188/1‑150 (MQ=255)

                           gCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTtgtg                                                                                                                            >  1:1124311/1‑150 (MQ=255)

                           gCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTtgtg                                                                                                                            >  2:1653791/1‑150 (MQ=255)

                           gCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTtgtg                                                                                                                            >  2:1653893/1‑150 (MQ=255)

                                gCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGa                                                                                                                       <  2:1855200/150‑1 (MQ=255)

                                 ccACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAg                                                                                                                      <  2:3941604/150‑1 (MQ=255)

                                  cACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGc                                                                                                                     >  2:376237/1‑150 (MQ=255)

                                  cACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGc                                                                                                                     >  1:1470955/1‑150 (MQ=255)

                                  cACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGc                                                                                                                     <  1:3137558/150‑1 (MQ=255)

                                   aCGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCg                                                                                                                    >  2:1525071/1‑150 (MQ=255)

                                   aCGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCg                                                                                                                    >  2:297460/1‑150 (MQ=255)

                                   aCGGCGACCTGGGTCGGCGCAGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCg                                                                                                                    >  2:126768/1‑150 (MQ=255)

                                     ggCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGAt                                                                                                                  <  2:1598475/150‑1 (MQ=255)

                                      gCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGAtg                                                                                                                 >  2:2930032/1‑150 (MQ=255)

                                      gCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGAtg                                                                                                                 <  2:155028/150‑1 (MQ=255)

                                       cGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGAtgg                                                                                                                <  1:1333324/150‑1 (MQ=255)

                                           cTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATggtggt                                                                                                            >  1:3324611/1‑150 (MQ=255)

                                               gTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACg                                                                                                        <  1:1528637/150‑1 (MQ=255)

                                                 cGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACggt                                                                                                      <  1:2248495/150‑1 (MQ=255)

                                                     gcTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACggtgggt                                                                                                  <  2:4208027/150‑1 (MQ=255)

                                                          tGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCgg                                                                                             >  1:3847867/1‑150 (MQ=255)

                                                             tGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGtt                                                                                          >  2:34894/1‑150 (MQ=255)

                                                             tGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGtt                                                                                          <  1:1798454/150‑1 (MQ=255)

                                                               gCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGc                                                                                        >  1:1391239/1‑150 (MQ=255)

                                                                cTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGcc                                                                                       >  1:1046549/1‑150 (MQ=255)

                                                                 ttGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGccc                                                                                      >  2:1992369/1‑149 (MQ=255)

                                                                 ttGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCa                                                                                      <  2:1783254/150‑1 (MQ=255)

                                                                 ttGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCa                                                                                      >  2:3870585/1‑150 (MQ=255)

                                                                 ttGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCa                                                                                      <  2:2856568/150‑1 (MQ=255)

                                                                    gCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGAtggtgg                                                                                                             >  1:2052082/1‑124 (MQ=255)

                                                                    gCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGc                                                                                   >  2:736050/1‑150 (MQ=255)

                                                                     ccGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCt                                                                                  <  2:4516256/150‑1 (MQ=255)

                                                                            aaCCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAgcgc                                                                           <  2:2678999/150‑1 (MQ=255)

                                                                             aCCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGcgcg                                                                          <  2:3550000/150‑1 (MQ=255)

                                                                             aCCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGcgcg                                                                          >  1:3651541/1‑150 (MQ=255)

                                                                             aCCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGcgcg                                                                          <  1:4049310/150‑1 (MQ=255)

                                                                             aCCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGcgcg                                                                          <  2:3347027/150‑1 (MQ=255)

                                                                                 gCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGgtgt                                                                      <  2:1431621/150‑1 (MQ=255)

                                                                                  cTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTc                                                                     >  2:3081695/1‑150 (MQ=255)

                                                                                  cTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTc                                                                     >  1:2983333/1‑150 (MQ=255)

                                                                                   ttGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCg                                                                    <  1:1769275/150‑1 (MQ=255)

                                                                                   ttGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCg                                                                    >  1:2642220/1‑150 (MQ=255)

                                                                                    tGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGa                                                                   >  1:4518863/1‑150 (MQ=255)

                                                                                          gCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCg                                                             <  2:2648563/150‑1 (MQ=255)

                                                                                           cTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCgg                                                            <  1:4351985/150‑1 (MQ=255)

                                                                                           cTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGACGACAGCCgg                                                            <  1:1852123/150‑1 (MQ=255)

                                                                                            tGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCggg                                                           >  1:2520505/1‑150 (MQ=255)

                                                                                               gTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGcct                                                        >  2:4364060/1‑150 (MQ=255)

                                                                                                 tGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGcctcc                                                      <  1:2275876/150‑1 (MQ=255)

                                                                                                 tGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGcctcc                                                      <  2:1933584/150‑1 (MQ=255)

                                                                                                    aaCAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGcctccctc                                                   >  2:2185053/1‑150 (MQ=255)

                                                                                                      cAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCtt                                                 >  1:2779561/1‑150 (MQ=255)

                                                                                                           ttGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCAccc                                            >  2:853958/1‑150 (MQ=255)

                                                                                                           ttGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCAccc                                            >  2:1907235/1‑150 (MQ=255)

                                                                                                            tGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCt                                           >  1:2913643/1‑150 (MQ=255)

                                                                                                              ggcgcaggcgcaACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCg                                         >  1:3950361/1‑150 (MQ=255)

                                                                                                                    ggcgcaACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATg                                   <  2:1336819/150‑1 (MQ=255)

                                                                                                                         aaCCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGc                              <  1:4218270/150‑1 (MQ=255)

                                                                                                                         aaCCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGGGGGCACGCTGGGTGGCGGGTTGCCCGGCTGCCGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCAGCCCTGc                              >  1:940078/1‑150 (MQ=255)

                                                                                                                          aCCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCg                             >  1:2420996/1‑150 (MQ=255)

                                                                                                                             gACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCATCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCt                          <  1:4043744/150‑1 (MQ=255)

                                                                                                                             gACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCt                          >  1:2196371/1‑150 (MQ=255)

                                                                                                                              aCTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCtt                         <  2:2721907/150‑1 (MQ=255)

                                                                                                                               cTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTg                        <  1:535407/150‑1 (MQ=255)

                                                                                                                                 gtgccggCTGGCCCGGCGCCTGCGCCTGCCCAGCCCGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTggg                      >  2:1815958/6‑150 (MQ=38)

                                                                                                                                    ccggCTGGCCCGGCGCCTGCGCCTGCCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCa                   >  1:3679046/3‑150 (MQ=255)

                                                                                                                                    cGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCAAGCCGCAGGCATGGGcga                   <  1:4298635/150‑3 (MQ=255)

                                                                                                                                    cGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCAAGCCGCAGGCATGGGcga                   <  2:446221/150‑3 (MQ=255)

                                                                                                                                    cGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGACCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGcga                   <  2:1868398/150‑3 (MQ=255)

                                                                                                                                     gggCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAg                  >  1:3790571/1‑150 (MQ=255)

                                                                                                                                         tGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGc              >  2:2562515/1‑150 (MQ=255)

                                                                                                                                         tGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGc              <  1:3401323/150‑1 (MQ=255)

                                                                                                                                         tGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGc              >  2:4479135/1‑150 (MQ=255)

                                                                                                                                           ggCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTc            >  2:344480/1‑150 (MQ=255)

                                                                                                                                           ggCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTc            <  2:2223249/150‑1 (MQ=255)

                                                                                                                                           ggCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTc            <  1:124165/150‑1 (MQ=255)

                                                                                                                                              aggcgcaggcgcCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCCGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTcgcg         >  2:3302774/1‑150 (MQ=255)

                                                                                                                                               ggcgccggcgccGGGCCCGCCGGCACACCGTGTGGCGGCGCGATGGTGGTCACGGTGGGTGGCGGGGTGCCCGGCTGCCGCGCGGGGGCGACAGCCGGGCCTCCCTCTTCCCCCGCGCCCATGCCTGCGGCTTGGGCCAGCGGGTCgcgc        <  2:940078/150‑1 (MQ=255)

                                                                                                                                               ggcgcaggcgcCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCgcgc        <  2:4270444/150‑1 (MQ=255)

                                                                                                                                               ggcgcaggcgcCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCgcgc        <  1:956897/150‑1 (MQ=255)

                                                                                                                                                gcgcaggcgcCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCa       >  2:339094/1‑150 (MQ=255)

                                                                                                                                                gcgcaggcgcCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCa       <  2:961/150‑1 (MQ=255)

                                                                                                                                                   caggcgcCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCa    <  1:620191/150‑1 (MQ=255)

                                                                                                                                                   caggcgcCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCa    <  2:3651541/150‑1 (MQ=255)

CTGGTTTTTCGGCAGCTTTGGCAGCCGGCTTGGCCACGGCGACCTGGGTCGGCGCTGGTGCTGGCTTGGCCGGTGCAACCGGCTTGGCGGGCTGGGTTGCAACAGGCTTGGGCGCAGGCGCAACCGACTGCACGGGCTGGGCAGGCGCAGGCGCCGGGCCAGCCGGCACACCTTGTGGCGGAGCGATGGTGGTCACGGTGGGTGGCGGGTTGCCAGGCTGCAGCGCGGTGTCGACAGCCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACC  >  NC_002947/5800556‑5800854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`