| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 97,593 | A→T | 5.3% | intergenic (+22/+14) | PP_0090 → / ← PP_0091 | hypothetical protein/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 97,593 | 0 | A | T | 5.3% | 457.5 / 13.1 | 161 | intergenic (+22/+14) | PP_0090/PP_0091 | hypothetical protein/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (72/74); new base T (4/4); total (82/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-02 | |||||||||||
Only 100 of 162 total aligned reads displayed.
GCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCAAAG > NC_002947/97446‑97742 | gCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAag > 1:4246042/1‑150 (MQ=255) cccAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagc < 1:3664007/150‑1 (MQ=255) cccAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagc > 2:2653972/1‑150 (MQ=255) cccAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagc < 2:2428819/150‑1 (MQ=255) aaGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAaccagc > 1:3612821/1‑150 (MQ=255) gggTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGcccc < 2:4072275/150‑1 (MQ=255) ggTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCca < 2:3422595/150‑1 (MQ=255) gTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCcac > 2:1042564/1‑150 (MQ=255) gTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCcac < 2:345761/150‑1 (MQ=255) gTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCcac < 1:1602514/150‑1 (MQ=255) tttCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCTGGGGCTGCTTCGCAGccccggg < 2:1528288/150‑4 (MQ=255) tCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGGACCAGCCCCacaca > 1:3917527/1‑149 (MQ=255) gTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGCAGCAGCCCCACACTCa > 1:2384935/1‑150 (MQ=255) tCCTACACGGTGGATATCGTGCCCAACAGCGAGGTAAAGGACCAGAACTTGGTCGTGGGTACCTGCTATGGCGGGACGAAGAAGATAATCTATCAGAAGAACGATCTATAAGAATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCAc < 2:3173009/150‑1 (MQ=255) ccTACACGCTGGAGATCGTGCCCAACAGCGAGGTCACGGACCTTAACATGGTCGTGGGGACCTGCGATGGGGGGACGAATAAGATAATATATCAGAAGAACGATCTATAAGCATCTGGGCCGGGGGCTGCGACGCAGCCCCACACTCACg < 2:643647/150‑1 (MQ=255) tACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACggg > 1:3970256/1‑150 (MQ=255) tACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACACACggg > 1:260419/1‑150 (MQ=255) acacGCTGGAGATCGTGCCCAACCGCGAGGTCAAGGACCATAACATGGTGGTGGGGACCCGCTTTGGCGGGACGAAGATGATCATCTATCAGAAGAAGGATCTATAAGAATCTGGGCCGGGGGCTGCTATGCTGCCCCACACTCACGGGa < 2:2292002/150‑1 (MQ=255) acGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATg > 1:615900/1‑150 (MQ=255) gCTGGAGATGGGGCCCACCAGCGTGGTCAAGCACCAGAACTTGGTCGTGGGGACCTGCTATGGCGGTACGAAGAAGATCATCTATCACAACAACTAACGATACGCATCAGGGCCCGGGGCTGCGACGATGCCCCACACTCACGGGATgta < 2:2639183/150‑3 (MQ=255) gCTGGAGATCGTGCCCAACAGCGTGGTCACGGACAAGAACTTGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCa < 2:1208879/150‑1 (MQ=255) gCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCa > 2:3499306/1‑150 (MQ=255) gCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACACACCGGATGCa > 1:1907563/1‑150 (MQ=255) tGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAACCAGCCCCACACACACGGGCTGCAGa > 1:3107112/1‑150 (MQ=255) cGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACTAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTc < 2:3247056/150‑1 (MQ=255) gggCCCAACTGCGAGGTCATGGACCAGAACATGGTCGTCGGGACCTGCGTTGGCGGTACGAAGAAGATCATCTATCAGAATAACGATCGATAAGCATCAGGGCCGGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCg < 2:3934945/148‑1 (MQ=255) tGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGc < 2:2314651/150‑1 (MQ=255) ggCCCAACCGCGCGGTCAAGGACCAGAACCTGGTCGGCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCACAAGAACGATCGATAAGAATCTGGGCCCGGGGCGGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGc < 2:3886689/149‑1 (MQ=255) ccAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACATCGCTAg > 1:3198570/1‑150 (MQ=255) aaCAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGGCCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGc > 2:2949989/1‑150 (MQ=255) aaCAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGGGGCGAAGCAGCCCCACACACACCGGATTCAGAACAAATCGCTAGGc > 1:402758/1‑150 (MQ=255) aaCAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGc > 2:1451787/1‑150 (MQ=255) accgCGAGGTCCCGCACCAGAACTTGGTGGTCGGGACCTGCGAGGGCGGTACGAAGACGATCATCTATAAGAAGAACGATCGATAAGCATCCGGGCCGGGGGCTGCGCAGCCGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCt < 2:127279/147‑1 (MQ=255) cAGCGTGGTCACGGACCAGAACATGGTCGTCGGGACCTGCGTTGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCGGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTc < 2:1993218/150‑1 (MQ=255) gCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGCAGCAGCCCCACACTCACGGGATGCAGAACACTTCTCGAGGCTCGt > 1:2217107/1‑150 (MQ=255) cGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGtt < 2:1484563/150‑1 (MQ=255) gTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCACCCCCACACAAACCGGATGCACAAAACAAAGCTAGGCTCGTTaacc > 1:2819774/1‑150 (MQ=255) tCAAGGACCTGAACATGGTCGTCGGGACCTGCTTTGGCGGGACGAAGAAGATCATATATCAGAAGAACGATCGATAAGAATCAGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcacca < 1:4140626/150‑1 (MQ=255) tCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcacca > 2:725639/1‑150 (MQ=255) tCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACATCGCTAGGCTCGTTcacca > 2:2769558/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGACCGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACATCGCTAGGCGCGTTcaccacc > 1:1755034/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcaccacc > 2:3163516/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcaccacc > 2:3948252/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACACTTCGCTAGGCTCGTTcaccacc > 1:1765934/1‑150 (MQ=255) aGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACCGGATGCAGAACACATAGCGAGGCTCGTTaaccacca > 1:3392665/1‑150 (MQ=255) gACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAAAACATAGCTAGGCTCGTTCaccaccacc > 1:999727/1‑150 (MQ=255) ccAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCtt > 2:1019646/1‑150 (MQ=255) cAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTg > 2:2961400/1‑150 (MQ=255) aaCATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCgg < 2:4327183/150‑1 (MQ=255) aaCATGGTCGTCGGGACATGCGATGGCGGGACGAAGAAGAACATCTATCAGAAGAACGATCGATAAGCATCAGGGCCAGGGTCTGCGAATCACCCCAACAAACACGGGATGAAGAACACATCGCTATGCACGTTAACCACCACCTTgagc > 2:2605432/1‑147 (MQ=255) cttGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGtt < 2:1314267/148‑1 (MQ=255) ggtggtCGGGACCTGCTTTGGGGGCACTAATAAGATAATATATCACAACAACTATCTATAAGCACCCGGGCCGGGGGGGGCGAACCACCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGc < 1:2701883/150‑1 (MQ=255) ggTCTTCGGGACCTGCGATGGCGGTACGAAGAACATAATCTATAACAACAACGATCGATAACCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGc < 2:112671/150‑1 (MQ=255) cgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGGTGCGAAGCAGCCCCACACACACGGGATGCAGAAAACATCGCGAGGCGCGTTCACCACCCCCATGCGGTTGGGGTCata > 1:3093393/1‑150 (MQ=255) ccTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATagca < 2:572815/150‑1 (MQ=255) cTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATagcag < 2:3624122/150‑1 (MQ=255) gaagaaGATCATCTATCAGAAGAACGATCGATAAGAATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCAt < 2:2769574/150‑1 (MQ=255) agaagaTCATCTATCAGAAGAACGATCTATACGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCa < 2:1598779/150‑1 (MQ=255) agaagaTCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACATCGCTAGGCTCGGTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCa > 1:1441992/1‑150 (MQ=255) aagaTCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCAcc < 2:288110/150‑1 (MQ=255) gaTCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACATCGCTAGGCTCGGTCACCACCACCTTGCGGTTGGCGTCATATATCAGCAACAGCGGCTCCAACAcccg > 1:2911273/1‑148 (MQ=255) gaTCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACAAACGGGATGCAGAACACATCCCTAGGCTCGTTCACCACCACCATGCGGTTGGCGTCAAATATCAGCAACAGCGGCTCCAACAcccg > 1:1459896/1‑148 (MQ=255) tcatcTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGACCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCAGAGGCTACAACACCcgcg > 2:3301188/1‑150 (MQ=255) tATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCACCCCCACACTCACGGGATGCAGAAAACTTAGCTAGGCTCGTTCAACAACAACTTGCGGTTTGCGTCATATAGCAGCACCAGCGGCTCCATCACCGGCGCCcgc > 2:138835/1‑150 (MQ=255) tCAGAATAACGATCTATACGCATCCGGGCCGGGGGCTGCTACGCCGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCgcgc < 1:4227630/150‑1 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCgcgc < 2:4367965/150‑1 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCgcgc > 2:3458259/1‑150 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGCTGCAGAACACATAGCTAGGCTCGTTCACCACCACCATGCGGTTGGCGTCATATAGCAGCACCGGCGGCTCCAACACCGGCGCCCgcgc > 1:4417859/1‑150 (MQ=255) gaagaaCGATCGATAAGCATCAGGGCCCGGGGCTGCGGAGCAGCCCCACACACACGGGATGCAGAAAACTTGGCTAGGGTCGTTGACCACCACCTTGGGGTTTGCGTCATATATCAGCACCTGCGGGTCCATCACCGGCGCCCGCGCttg > 2:1596592/1‑149 (MQ=255) aataaCTATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTcc < 1:2544889/147‑1 (MQ=255) ataaCTATCTATAAGCATCTGGGCCGGGGGGTGCGAAGAAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCa < 1:2816525/148‑1 (MQ=255) agaaCCATCTATAAGCACCAGGGCCGGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCa < 1:1205561/150‑1 (MQ=255) aaCGATCGATAAGCATCAGGGCCCGGGGCTGCGCAGCAGCCCCACACTCACGGGATGCAGAACACATCGCGAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAgg > 2:2277359/1‑150 (MQ=255) aaCGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAgg < 2:4156038/150‑1 (MQ=255) agtatctatAAGCATCTGGGCCGGGGGGGGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGc < 1:2713868/147‑1 (MQ=255) aCGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGc < 2:1682209/150‑1 (MQ=255) atctatAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGAt < 2:1547873/150‑1 (MQ=255) tcgatAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATa < 1:3340318/150‑1 (MQ=255) atAAGAATCAGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAgcg < 2:4291034/150‑1 (MQ=255) gCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGCTAGCGCTCg > 2:3156340/1‑150 (MQ=255) aTCAGGGCCCGGGGCTGCGAAGCCGCCCCACACGCACGGGATGCAGAACACATCGCGAGGCGCGGTCACCACCACCATGCGGTTGGCGTCATATAGCAGCACCGGCGGCTCCCTCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGcc > 2:1692071/1‑150 (MQ=255) tCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCg < 2:3671114/150‑1 (MQ=255) gggCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGcc < 2:897554/150‑1 (MQ=255) gggCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGcc < 1:1100816/150‑1 (MQ=255) tgtggggCTGCTTCGCAGCCCCGCACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTg > 1:2594880/4‑150 (MQ=255) cccGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTg > 2:2911696/1‑150 (MQ=255) cccGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTg < 2:1127636/150‑1 (MQ=255) cGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGaa < 2:3107111/150‑1 (MQ=255) ggggCTGCTTCGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCa > 2:2737133/1‑81 (MQ=255) ggggCTGCTTCGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCa < 1:2737133/81‑1 (MQ=255) ggggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAg > 1:1538955/1‑150 (MQ=255) gggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGt > 1:3021507/1‑150 (MQ=255) ggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGtt < 2:378380/150‑1 (MQ=255) ggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGtt < 2:1530919/150‑1 (MQ=255) ggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGtt < 2:1538595/150‑1 (MQ=255) ggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGtt < 2:1538955/150‑1 (MQ=255) cTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCGTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGt > 2:3829390/1‑150 (MQ=255) tGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTc > 1:883667/1‑150 (MQ=255) tGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTc > 1:1395521/1‑150 (MQ=255) gAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCaaa > 1:3124544/1‑150 (MQ=255) | GCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCAAAG > NC_002947/97446‑97742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |