| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,098 | T→C | 8.7% | intergenic (+68/‑220) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,098 | 0 | T | C | 8.7% | 269.6 / 9.6 | 95 | intergenic (+68/‑220) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (33/51); new base C (4/4); total (38/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
CAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTT > NC_002947/444949‑445246 | cAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCATGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGAt < 2:2461800/150‑1 (MQ=255)cAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGAt < 2:3618671/150‑1 (MQ=255) aaGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATc < 2:598326/150‑1 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCa < 1:4304611/150‑1 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCa < 1:4304607/150‑1 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCa < 1:2929488/150‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGGCCGCGAATGCGTCCGATCAGa < 2:3810431/150‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGa < 1:928917/150‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGa < 1:928267/150‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGa < 1:2550864/150‑1 (MQ=255) aaGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGacaac < 1:1211236/150‑1 (MQ=255) tCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑At < 1:952007/150‑1 (MQ=255) tCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑At < 1:951965/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Att < 2:931152/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Att < 2:152969/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 2:2591090/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 1:779342/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 1:4272677/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 1:4272587/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 1:2871040/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 2:3949727/150‑1 (MQ=255) cTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTTAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGt < 1:4239790/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGG‑GTGCCCGCGCATGCGGGCCCTCAGCCAACACAtttttg > 2:3966465/1‑148 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTc < 1:3665901/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTc < 2:858133/150‑1 (MQ=255) gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGG‑GTGCCCCCGCAAGCGTCCCATCACACAACC‑AATTTGtgttg > 2:3149771/1‑146 (MQ=255) gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTgg < 2:1216446/150‑1 (MQ=255) gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTgg < 2:1216374/150‑1 (MQ=255) cgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGt < 2:3106773/150‑1 (MQ=255) cAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAAATCGTCCGATCAGACAACA‑AATTTTTGTGGtgg > 2:1848665/1‑148 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCgg < 2:3269220/150‑1 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCgg < 1:1119070/150‑1 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGAC‑TTTCCCGCGAATGCGTCCGATAAGACAACA‑ATTTTGTCTGGTCgg > 2:1334246/1‑150 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTTCCCGCGAATGCGTCCGATCAGAAAAAA‑ATTTTGTCTGGGAGGGc > 2:2167607/1‑150 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGc < 1:1285967/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGc < 1:1286212/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGc < 1:1286283/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑GTGCCCGCCAAAGCGTCCGATCAGAAAAAA‑AATTTGTGTGGTGGGGc > 2:2167661/1‑150 (MQ=255) cgtcAAGGCATCCGACGAAATGCTTGGCCTGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAA‑TTGTTGTCTGATCggacgcat < 1:1362749/150‑7 (MQ=21) aaGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTcgc < 1:2671737/150‑1 (MQ=255) aaGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTcgc < 1:415889/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTcgct < 1:4091379/150‑2 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATGTTGTCTGGTCGGGCCTCTTcgcg < 2:3833341/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACGTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTGTGTCTGGTCGGGCCTCTTCGCgg < 2:4068803/150‑1 (MQ=255) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAA‑TTGTTGTCTGATCGGACGCATTCGCggg < 2:406792/150‑1 (MQ=18) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACGTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCggg < 2:1119492/150‑1 (MQ=255) cATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGc < 1:235520/150‑1 (MQ=255) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTATGGTCGGGCCACTTCGCCGGCaa > 2:2967771/1‑150 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGc < 1:1532747/150‑1 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAAAGCGTCCGATCAGACAACC‑ATTTTGTATGGTGGGGCCTCGTCGCGGGCAAGc > 2:2628377/1‑150 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGcc < 1:1607538/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGcc < 1:1438010/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGcc < 2:837072/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTGCAGCGCCTGCCTTGTAGGAGCGGGC‑GTGCCCGCGAATGCGTCCGATCAGACAACA‑CTTGTGTCTGGTCGGGCCTCTTCGCGGGCAAGcc < 1:2158132/150‑1 (MQ=255) gggCCGCATCATCGACACCTACGCCTTAATACTTGCGACATCCCCTTTTTCAGCGCCTGCGTTGGCGGAGGGGGC‑TTGCCGGCTAATGCGTCCTATCTTAAAACA‑TTTTTGTGTGGGGGGGCCTCTCCGGGGGCAAGCCCGCTCCTACaa < 2:1463008/149‑1 (MQ=255) ccGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGG‑ATGCCCCCCAATTCCTACGATAAGACAACA‑ATTTTGTCAGGTCGGGCCTCTTCCAGGGCCATCCCCCGCCGACAAcgg > 2:1019611/1‑150 (MQ=255) tcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑GTGCCCCCGGAAGCCGCCGGGCAGGCAACC‑ATTTTGTGGGGGCGGGGCGCATCGCGGGCCAGCCCCCGCCGACAACGGGTTGtggg > 2:2531054/1‑149 (MQ=255) tcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑GTGCCCCCCCATGCGGCCCCTCAGACAACC‑ATTTTGTCGGGGGGGGCCGCATGGCGGGCCACCCCGCGCCGACAAGGGGTTGtggg > 2:2531046/1‑149 (MQ=255) acacCTCCGCCTCAATACTGGCGACCCCCCCTTTTGCCGCGCCTCCCTTGTGGGCGGGGGC‑TGGCCCGGTATGGGGCCCTATCACACACCA‑TTTTTGTGGGGGGGGGCCGCTCCGGGGGCACGCCCGCTCCTACAAGGGTTTGtggcatg < 2:3895915/150‑1 (MQ=255) cccTACGCCTGACTCCGGGCGTCACCCCCTATTTCCGCGCCGGCCTTGTAGGAGCGGGC‑TTGCCCGCGACTGGGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatggc < 2:2568861/149‑1 (MQ=25) acCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCTAATGCGCCCGATCAGACAACA‑TTTTTGTCTGGTCGGGCCTCTTGGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatggc < 2:2568753/150‑1 (MQ=255) cctcccccTCAATCCTGGCGACACCCCCTATTCCAGCCCCGGCCTTGTAGGAGGGGGC‑TGGCCCGCCAAGGCGCCCGAACAGACACCA‑ATTTTGGGGGGCGGGGCCTCCCCGGGGCAAACCCCGCTCCTACAAGGGTTTGtggcatggca < 2:3440447/144‑1 (MQ=255) cTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTTCCCCCCCAAGGCG‑CCGCTCAGAAAAAA‑AATTTTTATGGTGGGGGCTCGTAGCCGGCCACCCCCCGACCAAAACGGGGTGTGGGATGGGATGaaata > 2:1747790/1‑146 (MQ=255) tCACCCCCTATTTCCGCGCCGGCCTGGTCGGCGGGGGC‑TGGCCCGCGAATGCGTCCGATCATCAAAAA‑ATTTGGCCGGGTCGGGCCTCTTCGGGGGAACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTc < 2:3273040/150‑1 (MQ=255) cATCCCCTATTTCAGCGCCTGCCTTGTCGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGCCAACA‑ATTTGGTCTGGGCGGGCCTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCg < 2:4107782/150‑1 (MQ=39) ccccccTCTTCCCGCCCCGGCGTTGTCGGCGCGGGC‑TTGCCCGCGAATGGGCCCGAACACACAACA‑ATTTTGGGGGGGCGGGCCCCTGCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGt < 2:3974916/148‑1 (MQ=255) aTCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGACCATACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGt < 2:4013616/150‑1 (MQ=255) tCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGG‑TTTGCCGCCGCAGCGTACCCTACTACAACA‑AATTTTTGGGGTGGGGCGGCTTAGCGGGCAACCCCGCGCCTACCAGGGTTTGTTGGATGGGCTGACAGGTTTTACAattttattt > 2:4401789/1‑146 (MQ=255) cTATTCCCGCGCCTGCCTTGTCGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGt < 2:710547/150‑1 (MQ=255) ccctgcctTGTTGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTGTGTCTGGTCGGCCCTATTCGGGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCAcc < 2:4428267/149‑1 (MQ=38) attcgCGGGC‑AAGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc > 2:4095695/5‑150 (MQ=255) ttGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 2:3317202/1‑150 (MQ=255) ttGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:4325168/1‑150 (MQ=255) ttGCCCGCGAAGAGGCCCGACCAGACAAAA‑TTGTTGTCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:893715/1‑150 (MQ=17) tGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAGTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAg > 1:3261976/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGGCTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1762061/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:4502842/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:1427949/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1996289/1‑150 (MQ=255) acgcgAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:3543912/2‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCg > 2:3888550/1‑108 (MQ=255) cgcgAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCg < 1:3888550/108‑1 (MQ=255) gcgAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg > 2:3781449/1‑150 (MQ=255) ccacggcgcCCGACCACCCAACA‑TGTTGGTCGGGCCGGCCCCCGCCGCGGCCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGc < 1:2842418/145‑1 (MQ=255) aTGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 2:3854862/1‑150 (MQ=255) gcccGACCAGACAAAA‑TTGTTGTCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 1:1581323/3‑150 (MQ=38) gTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 1:1747552/1‑150 (MQ=255) tCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 2:3311984/1‑150 (MQ=255) tCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 1:2979977/1‑150 (MQ=255) ccGACCAGACAAAA‑TTGTTGTCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTaa > 1:2766510/1‑150 (MQ=38) ccGACCAGACAAAA‑TTGTTGACTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTaa > 2:3440705/1‑150 (MQ=38) gATCAGACAACA‑ATGTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCAAAGTCCATCCGTGACAGAAAGAAGAGATAAACGTAAGt > 1:1694232/1‑150 (MQ=255) aTCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 2:1197813/1‑150 (MQ=255) aTCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 2:2139359/1‑150 (MQ=255) aTCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 2:2230677/1‑150 (MQ=255) aTCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 2:2139525/1‑150 (MQ=255) aTCAGACAACA‑ATTTTGTCTGCACGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTTTGGCATGGCATGACAGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAgat > 1:2794525/1‑148 (MQ=255) | CAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTT > NC_002947/444949‑445246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |