| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,878,982 | T→A | 6.6% | intergenic (+26/+79) | rpiA → / ← PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,878,982 | 0 | T | A | 6.6% | 791.1 / 4.4 | 259 | intergenic (+26/+79) | rpiA/PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (80/150); new base A (15/7); total (102/157) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 263 total aligned reads displayed.
GGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCAT > NC_002947/5878833‑5879131 | gcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACa > 1:1332985‑M1/127‑150 (MQ=255) gcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACa > 1:687026‑M1/127‑150 (MQ=255) gcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACa > 1:3213620‑M1/127‑150 (MQ=255) gCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACA < 1:2423203‑M1/150‑1 (MQ=255) cTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAGAACCCTTCGCGGGTAAACCCGCTCCTACaa < 2:881006/150‑1 (MQ=255) cTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAACCCCTTCGCGGGTAAACCCGCTCCTACaa < 2:933251/150‑1 (MQ=255) cTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACaa < 2:2605459/150‑1 (MQ=255) cTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCGCTCCTACaa > 1:1060702/1‑150 (MQ=255) tGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTGAAACCCCGCCTAtaaa > 1:126079‑M1/1‑146 (MQ=255) aaGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTa < 1:330966/150‑1 (MQ=255) aGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCAc < 2:1685666/150‑1 (MQ=255) gATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCAcc < 2:1454914/150‑1 (MQ=255) aTCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCg > 2:4479107/1‑150 (MQ=255) cAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGc > 2:2997982/1‑150 (MQ=255) aCGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCt < 1:3469870/150‑1 (MQ=255) cGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTg < 2:1203517/150‑1 (MQ=255) gCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTgg > 2:3241444/1‑150 (MQ=255) cATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGaa < 2:2369706/150‑1 (MQ=255) tcgtcgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAAcc < 2:2230443/150‑1 (MQ=255) gtcgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGt < 1:2830265/150‑1 (MQ=255) gACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtg > 2:1393206‑M2/1‑148 (MQ=255) gACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCGCAACGACAAGGTAACCCACCCGCCGGGTACCGTGGCGATaccag > 1:2557291/1‑148 (MQ=255) aCCAACGGCCTGGTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccagtccgtttgggtaccttgt < 2:3534228‑M1/150‑38 (MQ=255) ccAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgta < 2:243651‑M1/150‑39 (MQ=255) ccAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgta > 1:2101058‑M2/1‑146 (MQ=255) tgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAg > 1:4164768‑M1/88‑150 (MQ=255) cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCTTGTAAAACCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGTCGATCCCtgtag > 2:2955466‑M2/1‑145 (MQ=255) cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCCCTCCTACAAGGTACCCCACCGGCCAGGAACCCTGGCGATACCagtag < 2:1728322‑M2/150‑6 (MQ=255) aCGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACACGCTCCAACAAAGTACCCCACCCGCCAGGAACCGTGGCGATACCagtagga < 1:2139878‑M2/150‑8 (MQ=255) cGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCCCACCAAAAAAGTACCCCACCCCCCAGGAAACCTGGCGATACCagtatgag < 1:3562296‑M2/150‑9 (MQ=255) ggCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagc > 1:857401‑M2/1‑141 (MQ=255) ggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCgg > 1:2877330‑M1/82‑150 (MQ=255) ccTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgg > 1:2340247‑M2/1‑139 (MQ=255) ccTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGGAAACCCCCGCCGCCCCGGGACCCCCCCCGCCGGGCCCCGGGGCGCTCCCGGGAGGGGCgg > 2:573442/1‑150 (MQ=255) tGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggt > 2:4446155‑M2/1‑137 (MQ=255) cgcggcgcggCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttac > 2:2031507‑M2/1‑133 (MQ=255) cgcggcgcggCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttac > 2:169410‑M2/1‑133 (MQ=255) gcggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCCCGCCAACAAGGTAACCCACCCGCCGGGAACCCTGGCGATACCggtaggggcgggtttaac < 2:1234780‑M2/150‑19 (MQ=255) gcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgc > 1:724292‑M2/1‑129 (MQ=255) gcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgc > 2:3468934‑M2/1‑129 (MQ=255) cggcggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAgg < 1:2230218/150‑1 (MQ=255) tCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGGGAAACCCCGCCGACAACGTGCCCCCCCCGCCGGGCACCGGGGCGCGGCCAGGAGGGGCGGGGTTTGCCCCGCACACGcccaggc > 1:1692575/1‑146 (MQ=255) gctggtgctgGGCACCGCTGATGGCGTTAAGCGCCTTAAGGCCGTGTAAAACCCTGCGCGGTTAAACCGGCTCCTACACGGTACCCCACGGGCCTGTAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAgg < 1:3557114/150‑1 (MQ=255) gctgctgctgGGCACCGCTGATGGGGTGAAGAGCCTGACGGCCGTTTAAAACCCTTGGCGGTTAAACCCGCTCCTACATGTTACCCCACCGGCCTGGAACGGTGGCTATCCCTGTAGGAGCGGTTTTACCCGCGAACAGGCCCTGACAgg < 1:550678/150‑1 (MQ=255) gctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAgg < 1:4132145/150‑1 (MQ=255) gctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAgg < 2:1055119/150‑1 (MQ=255) gctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCGGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAgg > 2:3293311/1‑150 (MQ=255) tgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGACGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCg < 2:773630/150‑1 (MQ=255) tgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCg < 1:4032166/150‑1 (MQ=255) gctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCCCTCCAACAAGGTACCCCACCCGCCTGGAACCCTGGCGATACCAGTAGGAGCGGGTTTAACCCCCAACAGGCCCAGACAGGCGa > 2:154092/1‑150 (MQ=255) gctgGGCACCGCTTATGGGGTGAAGAGCCTTACGGCCGATTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGTAACCGTGGCTATCCCTGTTGGAGGGGTTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 1:2496719/150‑1 (MQ=255) gctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 2:1727287/150‑1 (MQ=255) gctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 2:86566/150‑1 (MQ=255) gctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 2:541026/150‑1 (MQ=255) ggCACGGCTGATGGCGTGAAGAGCCTGACGGCCGAGTAAAACCCTTCGCGGTTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACGGTGGCGATCCCTGTAGGTGGGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 1:2769099/150‑1 (MQ=255) ggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGTGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 2:1355475/150‑1 (MQ=255) ggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 1:1815519/150‑1 (MQ=255) ggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 1:4513599/150‑1 (MQ=255) gCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgc < 2:2021968/150‑1 (MQ=255) aaGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctgct < 2:430240/150‑1 (MQ=255) gCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGa < 1:1376132/150‑1 (MQ=255) gCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCCCGCCAACAACGTCACCCACCCGCCAGGAACCCTGGCGATACCGGGAGGAGCGGGGTTAACCGCGGCCAGGCCCAGAAACGCGATCACTCAGTCGGCGGCGTGa > 2:461784/1‑150 (MQ=255) cGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa < 2:3036550/150‑1 (MQ=255) ttGAAGTGCCTGCAGTCCGAGTAAAACCCTTCGCGGTTAAACCCGCTCCTACAAGGTACCCCACCTGCCTTTAACCGTGGCGATCCATGTAGGAGCGTGTTTACCCGCTAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGATTGAac < 1:3354838/149‑1 (MQ=255) gTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAac < 1:3761274/150‑1 (MQ=255) aaGAGCCTGACGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAAcaca < 2:724669/150‑1 (MQ=255) gagCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATa < 1:3675913/150‑1 (MQ=255) ccTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCCCGCCAAAAAGGGACCCCACCCGCCGGGCACCGGGGCGATCCCTGTAGGAGCGGGTTTAACCGCGAAAACGCCCTGACAGGCGATCACTCAGTCGGCTGCATGAACACAAAGaa > 2:3913700/1‑150 (MQ=255) cTGAAGGCCTACTAAACCCCTTCGCGGTTAAACCCGCACCAACAAGGACCCCCACCGCCCTGCAACCGTGGCCAACCATCTAGGACCGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAAc < 1:2076429/150‑1 (MQ=255) tGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACa < 2:3071802/150‑1 (MQ=255) gAAGGCCGAGTAAAACCCTTCGCGGGTTAAACCGCGCCGACAAGGTACCCCCCCCGCCGGGAAACCGGGCGATCCCGGGGGGTGCCGGTTTACCCCCGCACAGGCCCGGACAGGCGCTCAGTCAGTCGGCGGCGTGTACACAGAGAAAAg > 2:1882792/1‑150 (MQ=255) gAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAg < 1:1079178/150‑1 (MQ=255) gCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTCCCCCACCGGCCGGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGGCAGTCGGCGGCTTGCACACATAGAACAGGTTc > 2:2910417/1‑150 (MQ=255) gCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTc < 2:3745984/150‑1 (MQ=255) ctaGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTTGGAGCGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCgg < 1:518887/148‑1 (MQ=255) cGAGTAAAACCCTTCGCGGGTAACCCCGCTCATACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGGGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCgg < 1:943451/150‑1 (MQ=255) gAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGc < 1:2997982/150‑1 (MQ=255) gAGTAAAACCCTTCCCGGGTAAACCCGCTCCTACAAGGTACCCCACCCGCCTGGAACCGTGGCGAACCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACACGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGc < 2:2462604/150‑1 (MQ=255) tAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCa < 2:2153610/150‑1 (MQ=255) aaaaCCCTTCGCGGTTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCAc < 1:295441/150‑1 (MQ=255) cccTTCGCGGGTAAACCCCCTCCTACAAGGTAACCCACCCGCCGGGAACCGTGGCGATCCCTGTTGGATCGGGTTTACCCGCGAACAGGCCCAGACACGCGATCAGTCAGTCGGCGGCTTGAACACAAAGAACAGGGTCGGCGCACAGAc > 2:1861796/1‑150 (MQ=255) cTTCGCGGGTAAACCCGCTCCTACACGGTACCCCACCGGCGTGTAACCGTGGCGATCCCTGTAGGAGGGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCa < 1:154092/150‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAgggatcgccacgcttcaaggccggtggggtaccgtggaggagcggggttacccgcgaagggggttactcggccatcacgctcttcacgccgtcagcggtgcccagcaccagcagatccgcccgccg > 2:171814‑M1/1‑24 (MQ=255) TTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTTTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAg > 1:4264263‑M1/1‑150 (MQ=255) TCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAgg > 1:3181724‑M1/1‑150 (MQ=255) cgggggTAAACCCGATCCTACATGGTACCCCACCGGCCTGGAACCGTGGCGATCCGTGTAGGAGGGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGt < 1:4359555/147‑1 (MQ=255) CGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGt > 2:2557291‑M1/1‑150 (MQ=255) gggTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccg > 2:2107881‑M1/1‑19 (MQ=255) GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAgg > 2:3490963‑M1/1‑91 (MQ=255) GTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATg > 2:4072139‑M1/1‑150 (MQ=255) AACCCGCTCCTACATGGTACCCCACCGGCCTGGACCCGTGGCGATCCCTGTAGGAGCGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTc > 1:1882792‑M1/1‑150 (MQ=255) CCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTccc < 1:1968799‑M1/150‑1 (MQ=255) CCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTccc < 1:821421‑M1/150‑1 (MQ=255) CCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTccc < 1:3829262‑M1/150‑1 (MQ=255) ccGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacagg < 2:753302‑M2/150‑106 (MQ=255) CCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTcccc < 1:2287042‑M1/150‑1 (MQ=255) tCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggggcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgt < 2:3704235‑M2/150‑110 (MQ=255) gcctACAgggatcgccacggttccaggccggtgggttaccttttaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgt < 2:2800909‑M1/149‑144 (MQ=255) tACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttgg > 2:3455224‑M1/1‑4 (MQ=255) TACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCAt < 2:4122875‑M1/150‑1 (MQ=255) | GGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCAT > NC_002947/5878833‑5879131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |