| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,878,998 | G→C | 7.5% | intergenic (+42/+63) | rpiA → / ← PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,878,998 | 0 | G | C | 7.5% | 691.8 / 7.0 | 216 | intergenic (+42/+63) | rpiA/PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (67/128); new base C (16/4); total (83/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.28e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 220 total aligned reads displayed.
ATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCC > NC_002947/5878849‑5879145 | aTCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCGCCAAAAAGGTACCCCACCg > 1:1859462/1‑150 (MQ=255)aTCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCAGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCACCTACAACGTACCCCCCCg > 1:3694278/1‑150 (MQ=255) aCGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCt < 2:1189923/150‑1 (MQ=255) gCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTgg > 2:3241444/1‑150 (MQ=255) cATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGaa < 2:4122806/150‑1 (MQ=255) cATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGaa < 2:2369706/150‑1 (MQ=255) tcgtcgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAAcc < 2:2230443/150‑1 (MQ=255) cgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTgg < 1:2274596/150‑1 (MQ=255) cGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGa < 1:988448/150‑1 (MQ=255) ggtgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTTAAACCCCGCCAAAAAAGTAACCCCCCCGCCCGGAACCCGGGCGCTcc > 1:1961429/1‑150 (MQ=255) tGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCt > 1:203131‑M2/1‑149 (MQ=255) gACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtg > 2:399411‑M2/1‑148 (MQ=255) gACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCGCAACGACAAGGTAACCCACCCGCCGGGTACCGTGGCGATaccag > 1:2557291/1‑148 (MQ=255) ccAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgta > 1:2101058‑M2/1‑146 (MQ=255) atgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTa > 2:46093‑M1/89‑150 (MQ=255) tgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAg > 1:4164768‑M1/88‑150 (MQ=255) cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCTTGTAAAACCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGTCGATCCCtgtag > 2:2955466‑M2/1‑145 (MQ=255) cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCAACAAGGTACCCCACCGGCCTGGGACCGGGGCGATcccaggag > 2:1728327/1‑145 (MQ=255) aaCGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCAACAAGGTACCCCACCGGCCTGGAACCCTGGCGATCCCggtagg < 1:3344372‑M2/150‑7 (MQ=255) aCGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACACGCTCCAACAAAGTACCCCACCCGCCAGGAACCGTGGCGATACCagtagga < 1:2139878‑M2/150‑8 (MQ=255) ggCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagc > 1:857401‑M2/1‑141 (MQ=255) cgcggcgcggCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttac > 2:169410‑M2/1‑133 (MQ=255) cgcggcgcggCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttac > 2:2031507‑M2/1‑133 (MQ=255) catttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTa < 2:1303338‑M1/74‑1 (MQ=255) catttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTa > 1:1303338‑M1/76‑149 (MQ=255) cggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttaccc > 1:2961733‑M2/1‑131 (MQ=255) cggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttaccc > 2:2107881‑M2/1‑131 (MQ=255) gcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgc > 1:724292‑M2/1‑129 (MQ=255) cggcgggcGGATCTGCTGGTGCTGGGCACCGCTGACGGCGTGAAGAGCGTGATGGCCGAGTAACCCCCTTCGCGGGTAACCCCGCTCCTCCACGGTACCCCACCGGCCTTGAAGCGTGGCGATCCCtgtaggagcgggtttacccgcgaa > 2:171814‑M2/1‑126 (MQ=255) gccggcGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACa < 1:1815532/150‑1 (MQ=255) ccggcGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCAACAAGGTACCCCACCGGCCGGGAACCGTGGCGCTCCCTGGAGGAGCGGGTTTACCCGCGAACAg > 2:1411256/1‑150 (MQ=255) ggcggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCGGGAACCGTGGCGCTCCCTGTAGGAGCGGGTTTACCCGCGAACAGGc > 2:3424753/1‑150 (MQ=255) tCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCCCTCCTACAAGGTACCCCACCCGCCTGGAACCGTGGCGATCCCAGTAGGAGCGGGTTTACCCGCGACCAGGCCCAGAc > 2:1369824/1‑150 (MQ=255) tCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCGCTCCGACAAGGTACCCCACCGGCCGGGAACCGTGGCGATCCCAGTAGGCGCGGGGGTTCCCGCGAACAGGCCCAGAc > 1:2917387/1‑150 (MQ=255) tCTGCTGCTGCTGGGCACCGCTAAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGAc < 2:622286/150‑1 (MQ=255) gctggtgctgGGCACCGCTGATGGCGTTAAGCGCCTTAAGGCCGTGTAAAACCCTGCGCGGTTAAACCGGCTCCTACACGGTACCCCACGGGCCTGTAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAgg < 1:3557114/150‑1 (MQ=255) tgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCg < 1:4032166/150‑1 (MQ=255) tgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGGACCCCACCGGCCGGGAACCGTGGCGATCCCGGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCg > 2:4448122/1‑150 (MQ=255) gctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTTAACCCCCTCCGACAAGGTACCCCACCGGCCGGGGACCGGGGCGGTCCCAGTAGGAGCGGGGTTACCCGCGAACAGGCCCGGACAGGCgc > 2:3031984/1‑149 (MQ=255) gctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCCCTCCAACAAGGTACCCCACCCGCCTGGAACCCTGGCGATACCAGTAGGAGCGGGTTTAACCCCCAACAGGCCCAGACAGGCGa > 2:154092/1‑150 (MQ=255) gctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCCCGCCAACCAGGTACCCCACCGGCCGGGAAACGAGGCGCTCCCGGTAGGAGCGGGGTTACCCCCGCACACGCCCTGACAGGCgc > 2:1884797/1‑149 (MQ=255) gctgGGCACCGCTGATGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 1:666626/150‑1 (MQ=255) gctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 2:541026/150‑1 (MQ=255) gctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 2:1727326/150‑1 (MQ=255) gctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 2:86566/150‑1 (MQ=255) tgGGCACCGCTGACGGCGTGACGAGCCTGACGGCCGAGTAAAACCCTGCGCGGTTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTTTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagt < 1:1581876/150‑1 (MQ=255) tgGGCACCGCTGAAGGCGTGACGAGCCTGAAGGCCGAGTAAACCCCTTCGCGGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagt < 1:1364028/150‑1 (MQ=255) tgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCCCGCCAAAAAGGTACCCCACCCGCCGGGAACCCGGGCGATCCCAGGAGGTGCGGGTTTAACCGCCAAAAGGCCCAGACAGGCGCtcagt > 1:1094207/1‑150 (MQ=255) gggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtc < 1:343011/150‑1 (MQ=255) ggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGTGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 2:1355475/150‑1 (MQ=255) ggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 1:4513599/150‑1 (MQ=255) ggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTGCGCGGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 1:628605/150‑1 (MQ=255) cGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCGCCTACAAGGTACCCCACCCGCCTGGAACCGTGGCGATCCCGGGTGGCGCGGGTTTACCCCCGCACAGGCCCAGACAGGCGCTCAGTCAGTCgg > 2:261346/1‑150 (MQ=255) cGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCACCTACAAGGTACCCCACCCGCCAGGAACCCTGGCCGTTGCGGTAGGAGCGGGTTTACCCGCGAACAGGCCCAGACAGGCGATCAGTAACTCgg > 1:4076065/1‑150 (MQ=255) gCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgc < 2:2021968/150‑1 (MQ=255) gatggCGTGAAGAGCCTGAAGGCCGCGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctgc < 1:2528069/147‑1 (MQ=255) gAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGTTACCCCCCCGGCCTGGAACCGTGGCGATCCCTGTAGTAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctgc < 1:3612647/150‑1 (MQ=255) aaGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctgct < 2:430240/150‑1 (MQ=255) cGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa < 2:3475600/150‑1 (MQ=255) cGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa < 2:3036550/150‑1 (MQ=255) cGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa < 2:2807758/150‑1 (MQ=255) gTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGGACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAac < 2:2397779/150‑1 (MQ=255) ttacgcgCCTGACGGCCGAGTAAACCCCTTCGCGGGTAACCCCGCTCCAACACGGTACCCCCCCGGCCTGGAACCGTGGCGAGCCCTGTAGGCGCGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTCGAaca < 1:107676/144‑1 (MQ=255) aaGAGCCTGACGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAAcaca < 2:724669/150‑1 (MQ=255) cTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAAc < 1:2870815/150‑1 (MQ=255) tGACGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCAATCAGTCAGTCGGCTGCTTGAACACATAGAACa < 1:521214/150‑1 (MQ=255) tGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACa < 2:802187/150‑1 (MQ=255) tGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACa < 2:3071802/150‑1 (MQ=255) gCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTc < 2:3745984/150‑1 (MQ=255) cGAGTAAAACCCTTCGCGGTTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCgg < 1:3105967/150‑1 (MQ=255) cGAGTAAAACCCTTCGCGGGTAACCCCGCTCATACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGGGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCgg < 1:943451/150‑1 (MQ=255) tAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCa < 2:2153610/150‑1 (MQ=255) aaaaCCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCAc < 1:4430093/150‑1 (MQ=255) cccTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGAc < 1:1427629/150‑1 (MQ=255) cccTTCGCGGGTAAACCCCCTCCTACAAGGTAACCCACCCGCCGGGAACCGTGGCGATCCCTGTTGGATCGGGTTTACCCGCGAACAGGCCCAGACACGCGATCAGTCAGTCGGCGGCTTGAACACAAAGAACAGGGTCGGCGCACAGAc > 2:1861796/1‑150 (MQ=255) TTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTTTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAg > 1:4264263‑M1/1‑150 (MQ=255) TCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAgg > 1:3181724‑M1/1‑150 (MQ=255) cgggggTAAACCCGATCCTACATGGTACCCCACCGGCCTGGAACCGTGGCGATCCGTGTAGGAGGGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGt < 1:4359555/147‑1 (MQ=255) CGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGt > 2:2557291‑M1/1‑150 (MQ=255) GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAgg > 2:3490963‑M1/1‑91 (MQ=255) GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAgg < 1:3490963‑M1/91‑1 (MQ=255) CCCGCTCCTACAATGTACCCCACCGTCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGAAAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACAAGGTAAATGGTccc < 1:1701887‑M1/150‑1 (MQ=255) CCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTccc < 1:2474985‑M1/150‑1 (MQ=255) CCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTccc < 1:3845965‑M1/150‑1 (MQ=255) CCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTccc < 1:821421‑M1/150‑1 (MQ=255) ccGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacagg < 2:753307‑M2/150‑106 (MQ=255) CCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTcccc < 1:2229019‑M1/150‑1 (MQ=255) CCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTcccc < 1:3783007‑M1/150‑1 (MQ=255) CGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCg < 1:2798624‑M1/150‑1 (MQ=255) tCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggggcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgt < 2:3704235‑M2/150‑110 (MQ=255) tACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttgg < 2:243651‑M2/150‑113 (MQ=255) TACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCTGGTAAATGGTCCCCGCTTCAt < 2:4125101‑M1/150‑1 (MQ=255) aCAAGGTACCCAAACGGACTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaccaggccgttggt < 2:3534228‑M2/150‑114 (MQ=255) ACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATc < 2:4506487‑M1/150‑1 (MQ=255) ACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATc > 2:2292332‑M1/1‑150 (MQ=255) AAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGACCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCa < 1:2624841‑M1/150‑1 (MQ=255) cccACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAAt > 2:396248/1‑150 (MQ=255) ccACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATc > 1:518567/1‑150 (MQ=255) aCCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCACTccc > 2:3885616/1‑150 (MQ=255) aCCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATccc > 2:2476841/1‑150 (MQ=255) | ATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCC > NC_002947/5878849‑5879145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |