| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,926,529 | A→C | 13.1% | intergenic (‑121/+76) | gcvP‑II ← / ← gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,926,529 | 0 | A | C | 13.1% | 455.3 / 2.5 | 183 | intergenic (‑121/+76) | gcvP‑II/gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Reads supporting (aligned to +/- strand): ref base A (88/58); new base C (6/20); total (96/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.29e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 185 total aligned reads displayed.
AGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCA > NC_002947/5926380‑5926678 | aGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACa < 1:2578066/150‑1 (MQ=255) ttGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAgg < 2:2327248/150‑1 (MQ=255) tGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCt > 2:3860354/1‑150 (MQ=255) tGCAGGGATGGCGACTGGGACATAACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCt < 2:1222912/150‑1 (MQ=255) gCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTg > 2:27494/1‑150 (MQ=255) gCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTg > 2:2076601/1‑150 (MQ=255) aGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCACCCACACGggcggcc > 1:2850840/1‑149 (MQ=255) gggATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCAc < 2:566916/150‑1 (MQ=255) gggATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCAc < 2:3826593/150‑1 (MQ=255) ggATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCAcc > 2:3945304/1‑150 (MQ=255) ggATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCGAAAGCCCCTCCGAAAGGGGCGGCAcc > 1:2497837/1‑150 (MQ=255) gCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGtct < 2:3481025/150‑1 (MQ=255) gCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGtct < 1:741048/150‑1 (MQ=255) cGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGtctc < 1:1003641/150‑1 (MQ=255) cGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGtctc < 1:3598059/150‑1 (MQ=255) cGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGtctc < 1:3217584/150‑1 (MQ=255) aCTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGa > 1:4381675/1‑150 (MQ=255) aCTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGa > 1:4465919/1‑150 (MQ=255) tGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCGCACCAACAGGGGCTTCACACGTCTCGAAt > 2:4156757/1‑150 (MQ=255) gggACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGGGTCGAATg > 1:371829/1‑150 (MQ=255) ggACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCGCCAACAGGGGCTGCACCCCGCTCGAATGc > 1:3842478/1‑150 (MQ=255) cATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCCGt > 2:4240523/1‑150 (MQ=255) gacgacGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCt < 1:3755077/150‑1 (MQ=255) gacgacGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCt < 1:4273502/150‑1 (MQ=255) gacgacGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCAACAGGGGCGGCACCCCGCTCGAAAGCAGTGCt > 1:3928521/1‑150 (MQ=255) acgacgCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCCGTGCTg > 2:2820873/1‑150 (MQ=255) acgCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTAc < 2:3163411/150‑1 (MQ=255) gCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCt < 2:860034/150‑1 (MQ=255) tctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCtgt < 1:1002419/150‑1 (MQ=255) tctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCtgt < 1:2120930/150‑1 (MQ=255) ctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTAccgggg > 2:371220/1‑146 (MQ=255) tctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTgtgt < 1:892292/150‑1 (MQ=255) tctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTgggt > 2:1705213/1‑150 (MQ=255) tctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCAAAAGACGCTCCTACAGGGGCAGCACCCGGCGCGAATTCAGGGCTGTACCTgtgt > 1:1849860/1‑150 (MQ=255) ctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTa < 2:3454764/150‑1 (MQ=255) ctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTa < 2:3501316/150‑1 (MQ=255) ttCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCTAAACGGGCAGGACCCCGCGCGAATTCAGGGCAGTACCAGTGTAg > 1:3621371/1‑150 (MQ=255) tCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATTCAGTGCTGTACCTGTGTAgg > 2:1969409/1‑150 (MQ=255) ccTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGa < 2:348866/150‑1 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGc < 1:622553/150‑1 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGACCCGCCAACAGGGGCTGCACCCCGCGCGAATGCAGTGCTGTAACGGTGTTGGAGc > 1:405100/1‑150 (MQ=255) aGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCCCGCCTAAACGGGCGGGACCCCGCTCGCATGGAGGGCTGTACCGGTGTAGGTGCg > 1:815580/1‑150 (MQ=255) gACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCgg < 2:3988800/150‑1 (MQ=255) gACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCgg < 1:307121/150‑1 (MQ=255) aCCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCTGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGc < 2:2996344/150‑1 (MQ=255) ccAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCt < 2:2377507/150‑1 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCcg < 2:4203879/150‑1 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCGACCGGGGCGGCACCCGGCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCcg > 1:1465913/1‑150 (MQ=255) aTGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGtctc > 1:2051643/1‑109 (MQ=255) aTGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGtctc < 2:2051643/109‑1 (MQ=255) tGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGGTAAATCCCCACCAACAGGGGCGGCACCCGTCTCGAATGCAGTGCGGTAACAGTGTTGGAGCGGGGTTAggcccgc > 1:970744/1‑144 (MQ=255) ggAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGGTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTGGAATGGAGTGGTGTAGGTGTGTAGGAGCGGCTTTTTCCGCGaa > 2:1312626/1‑150 (MQ=38) actccccaGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCCCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGaagcaa < 2:3659232/143‑1 (MQ=255) aCTTACAAGTCTAGTATGGGATTGCCGATGGTGCGGGTAAACTTGTTTGCCGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCATACCGGGGCTGCACCCGTCTCGAATGCTGGGCTGTACCTTTTTAGTAGCGGCTTTAGCCGCGaagcaa < 2:2727495/150‑1 (MQ=37) aGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAAcgc > 2:2602017/1‑150 (MQ=255) gTCTTGGATGGGTTTGCCGTTTGTGCGGGGAAATTTTTTTGCAGGCCCGGCCTCTTCGCGGCTAACGCCGCGCCTCCCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAAcgcg < 2:2438398/150‑1 (MQ=255) gTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTGTCGAATGCAGTGGTGTACCTGTGTAGGAGCGGCTTTAGGCGCGTAGCAAGCAAcgcg > 2:1459500/1‑150 (MQ=255) tAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCCGCTCGAATGCAGTGCTGTAACTGGGTAGGAGCGGCTGTAGCCGCGAAgcaaacaaaccgggc > 1:1393343/1‑143 (MQ=38) gAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCTCCAACAGGGGCTGCACCCGTCGCGAAAGCAGTGCTGGACCTGGGTAGGAGCGGCGTTAGCCGCGAAGCAAGCAACCCCGTCTTa > 2:2635863/1‑150 (MQ=255) aaGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTAACTGTGTAGGAGCGGCTTTAGTCGCGAAGCAAGCAACGCGGTCTTAc > 1:123712/1‑150 (MQ=255) gggTTTGCCGTTTGTGCGGGTAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCTAATGCAGTGCTGTACGTGTGTAGGAGCGGCTTTTGCCGCGAAGCAAGCAACGCGGTCTTACTc < 2:3578201/150‑1 (MQ=255) ttGCCGATTGTGCGGGGAAACTTGTTTGCCGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTTGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCa < 2:3636402/150‑1 (MQ=255) cctaTTGTGCGGGTAAACTTTTTTGCCGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATc < 2:1214380/147‑1 (MQ=39) cGATTGTGCGGGGAAACTTGTTTGCAGGCCCTGCCTCTTCGCGGCTAAAGCCGCTCCTACGGGGGCTGCACCCGTCTCGAATGCAGTGCGGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCa > 2:1854287/1‑150 (MQ=255) tgggCGGGTAAACTTGTTGGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTTTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAgcgc < 1:3669052/147‑1 (MQ=39) tgCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTTAAGCCGCTCCTACTGGGGCTGCACCCGTCTCGGATGGAGGGGTGTAGCTGGGGAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGGCTTACTCGCCAATCAGCGCCt > 2:1133794/1‑150 (MQ=255) gggggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACGTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTgg < 2:3493848/149‑1 (MQ=255) cGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACACGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTgg > 2:282034/1‑150 (MQ=255) ggggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAAAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATAAGCGCCTGGt > 2:3244055/1‑150 (MQ=255) ggggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCTCCAACAGGGGCTGCACCCGTCTCGAAAGCACTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCGTACACGCCAAAAAGCGCCGGGt > 2:1326401/1‑150 (MQ=255) aaCTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAACGCCGCTCCTACAGGGGCTGCACCCGTCTCGATTGCAGTGCTGTACCTGTGTAGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagcca < 2:2104996/150‑1 (MQ=255) cTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagccagc < 2:717134/150‑1 (MQ=255) ttGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCGGCACCCGTCTCGAATGCAGGGCGGTACCGGTGTGGGAGCGGCTTTAGCCGCCAAGCAAGCAACGCGGTCTTACGCGCCCATCAGCGCCTGGGagccagcc > 2:3080591/1‑150 (MQ=255) ttGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCCTCTCGAAATCAGTGGAGTACCGGTGTAGGAGCGGCGTTTTCCGCGAAGCAAGCAACCCGGTCTGAATCGCCCATAAGCGCCGGGTagcccgcc > 2:762406/1‑150 (MQ=255) tttGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCCAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCa < 2:2891840/150‑1 (MQ=255) ttGCAGGCCCGGCCTCTTCGCGGCGAAATCCGCACCAACAGGGGCTGCCCCCGTCTCGAATTCAGTGCGGTAACGGTGTAGGAGCGGCGTTAGCCGCCAAGCAACCAAAGCGGTGGTACTCGCCAATAAGCGCCAGGTATCCACCCCCaa > 2:406375/1‑149 (MQ=255) gtGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCCGCTCGCATGCAGTGCTGTACCTGGGTAGGAGCGGCTTTAGCCCCGAAGCAAGCAACGCGGTCTTACTCGCCAATAAGCGCCGGGTAGCCcgccgcca > 2:3428406/2‑148 (MQ=38) aGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCGCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAAACAGCCCCTGGTAGCCAGCCGCAACCAg > 2:653390/1‑150 (MQ=255) aGGCCCGGCCTCTTCGCGGCGAAAGCCCCGCCGACAGGGGCTGCCCCCGGCGCGCCGGCCGGGCGGGACCGGGGGTGGCGCGGCGTTAGCCGCGCAGCCACCCCCGCGGGCGGGCTCGCCCAACACCGCCGGGGAGCCcgccgccgcccg > 2:1887820/1‑144 (MQ=255) gCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAAAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCGGTGGAGGAGCGGCGTTAGCCGCGAAGCAAGCAAAGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCa > 2:1318379/1‑150 (MQ=255) cccGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCCGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCaa < 2:925334/150‑1 (MQ=255) cGGCCTCTGGGCGGCTAACGCCGCCCCTCCGGGGGCTGCACCGGTCGGTATGGCTGTGGTGTACGTGGGTTGGCGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACt < 1:3243404/150‑1 (MQ=255) ccTCTTCGCGGATAAAGCCGCTCATACTGGGGCTGCACCCGTCTCTAATGCAGTGCTTTACCTGTTTAGGAGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGt < 1:297773/150‑1 (MQ=255) ctctTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCTGTGCTGTACCTGTTTTGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTc < 1:661943/150‑1 (MQ=255) gcgGCTTTAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTc > 1:2997432/1‑150 (MQ=255) gcgGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTc > 2:563082/1‑150 (MQ=255) gcgGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTc > 1:19772/1‑150 (MQ=255) cgGATAACGCCGCTCCTCCGGGGGGTGCACCCGACTCGAATGCTGTGCTTTACCTTTGTCGGTGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCg < 1:2399710/150‑1 (MQ=255) tAAAGCCGCTCCTCCCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCg < 2:2457696/150‑1 (MQ=255) aaaGCCGCTCCTACTGGGGCTGCACCCGTCTCGAATGCAGTGGTGTACCTGTTTCGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCgg < 1:329860/150‑1 (MQ=255) aaaGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGAGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCgg > 1:1540318/1‑150 (MQ=255) aGCCGCTCCTACTGGGGCTGCACCCGTCTCGACTGCTGTGCTGTACCTGTGTAGGTGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGt < 1:4121945/150‑1 (MQ=255) ccGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTg > 2:2544372/1‑150 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 1:314854/1‑150 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 2:2566794/1‑150 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGGGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 1:976543/1‑150 (MQ=255) ctcctcCCGGGGCTGCACCCGTCTCTAATGCCGTGCGTTCCGTGTGTAGGAGGGTCTTTCGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCtt < 1:1894898/150‑1 (MQ=255) cTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCtt > 1:1679751/1‑150 (MQ=255) aCAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCtt > 2:2866620/1‑150 (MQ=255) aGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCa > 2:2921025/1‑150 (MQ=255) | AGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCA > NC_002947/5926380‑5926678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |