| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,926,569 | A→T | 11.7% | intergenic (‑161/+36) | gcvP‑II ← / ← gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,926,569 | 0 | A | T | 11.7% | 508.4 / 5.0 | 205 | intergenic (‑161/+36) | gcvP‑II/gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Reads supporting (aligned to +/- strand): ref base A (104/63); new base T (5/22); total (110/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.41e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 208 total aligned reads displayed.
CTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTCAGCA > NC_002947/5926420‑5926717 | ctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTa < 2:3501316/150‑1 (MQ=255)ctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTa < 2:3454764/150‑1 (MQ=255) ttCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCCCTCCAACACGGGCTGCACCCGTCTCGAATTCAGTGCTGTACCAGTGTAg > 1:2953946/1‑150 (MQ=255) ttCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCTAAACGGGCAGGACCCCGCGCGAATTCAGGGCAGTACCAGTGTAg > 1:3621371/1‑150 (MQ=255) ccTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGa < 2:348866/150‑1 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCCCTCCAACACGGGCAGCACCCCTCTCGAATGCAGTGCGGTACCAGTGTAGGAGc > 2:1894654/1‑150 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGc < 1:622553/150‑1 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACAGGGGCTGCACCCGTCTCGAATGCAGTGCGGTACCGGTGTAGGAGc > 2:1193822/1‑150 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCTACAGGGGCTGCACCCGGCTCGAATGCCGTGCTGTACCTGGGGAGGAGc > 1:2985341/1‑150 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGACCCGCCAACAGGGGCTGCACCCCGCGCGAATGCAGTGCTGTAACGGTGTTGGAGc > 1:405100/1‑150 (MQ=255) aGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCCCGCCTAAACGGGCGGGACCCCGCTCGCATGGAGGGCTGTACCGGTGTAGGTGCg > 1:815580/1‑150 (MQ=255) gACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCgg < 2:3988800/150‑1 (MQ=255) aCCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCTGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGc < 2:2996344/150‑1 (MQ=255) aCCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGc < 1:695569/150‑1 (MQ=255) ccAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGGGAAAACCCCGCCGACCCGGGGGGCCCCCCGCGCGAAAGCCGTGCGGTACCAGGGGTGGAGCGGcg > 1:3884239/1‑149 (MQ=255) cTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGcc < 2:3977438/150‑1 (MQ=255) cTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGcc < 2:2460009/150‑1 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCcg > 2:2342580/1‑150 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCGACCGGGGCGGCACCCGGCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCcg > 1:1465913/1‑150 (MQ=255) tGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGGTAAATCCCCACCAACAGGGGCGGCACCCGTCTCGAATGCAGTGCGGTAACAGTGTTGGAGCGGGGTTAggcccgc > 1:970744/1‑144 (MQ=255) tGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGa > 2:415724/1‑150 (MQ=255) aCTTACAAGTCTAGTATGGGATTGCCGATGGTGCGGGTAAACTTGTTTGCCGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCATACCGGGGCTGCACCCGTCTCGAATGCTGGGCTGTACCTTTTTAGTAGCGGCTTTAGCCGCGaagcaa < 2:2727495/150‑1 (MQ=37) ttACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCTACTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCGGTGTAGGAGCGGCGTTAGCCGCGaagcaagc > 2:1973428/1‑150 (MQ=255) aGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAAcgc > 2:2602017/1‑150 (MQ=255) tCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACACGGGCTGCACCCGTCTCGAAAGCAGTGCTGTACCAGTGTAGGAGCGGCTTTTGCCGCGAATCAAGCAACGCgg > 1:2999923/1‑150 (MQ=39) tAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCCGCTCGAATGCAGTGCTGTAACTGGGTAGGAGCGGCTGTAGCCGCGAAgcaaacaaaccgggc > 1:1393343/1‑143 (MQ=38) gggTTTGCCGTTTGTGCGGGTAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCTAATGCAGTGCTGTACGTGTGTAGGAGCGGCTTTTGCCGCGAAGCAAGCAACGCGGTCTTACTc < 2:3578201/150‑1 (MQ=255) ttGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGATTGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCa < 2:3636472/150‑1 (MQ=255) aTTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAgc > 2:1084275/1‑150 (MQ=255) tgggCGGGTAAACTTGTTGGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTTTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAgcgc < 1:3669052/147‑1 (MQ=39) cGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTGTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTgg > 2:4457020/1‑150 (MQ=255) ggggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCTCCAACAGGGGCTGCACCCGTCTCGAAAGCACTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCGTACACGCCAAAAAGCGCCGGGt > 2:1326401/1‑150 (MQ=255) aaCTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAACGCCGCTCCTACAGGGGCTGCACCCGTCTCGATTGCAGTGCTGTACCTGTGTAGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagcca < 2:2104996/150‑1 (MQ=255) aCTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGATTGCTGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagccag < 2:2398437/150‑1 (MQ=255) cTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagccagc < 2:717134/150‑1 (MQ=255) cTTGTTTGCAGGCCCGGCCTCTTCGCGGATAAAGCCGCTCCCACAGGGGCTGCACCCGTCCGTAATGCAGTGCTTTACCTGTTTAGTTGGGGCTTTACCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagccagc < 1:1868436/150‑1 (MQ=255) ttGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCGGCACCCGTCTCGAATGCAGGGCGGTACCGGTGTGGGAGCGGCTTTAGCCGCCAAGCAAGCAACGCGGTCTTACGCGCCCATCAGCGCCTGGGagccagcc > 2:3080591/1‑150 (MQ=255) tGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCGGTGTAGGAGCGGCGTTAGCCGCGAAGCAAGCCACGCGGTCTTACTAGCCAATCACCGCCTGGTAGCCAGCCg > 2:1269355/1‑150 (MQ=39) tttGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCCAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCa < 2:2891840/150‑1 (MQ=255) gtGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCCGCTCGCATGCAGTGCTGTACCTGGGTAGGAGCGGCTTTAGCCCCGAAGCAAGCAACGCGGTCTTACTCGCCAATAAGCGCCGGGTAGCCcgccgcca > 2:3428406/2‑148 (MQ=38) aGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAg > 2:3635590/1‑150 (MQ=255) aGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCGCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAAACAGCCCCTGGTAGCCAGCCGCAACCAg > 2:653390/1‑150 (MQ=255) cccGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCCGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCaa < 2:925334/150‑1 (MQ=255) cccGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCaa > 2:3696583/1‑150 (MQ=255) cGGCCTCTGGGCGGCTAACGCCGCCCCTCCGGGGGCTGCACCGGTCGGTATGGCTGTGGTGTACGTGGGTTGGCGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACt < 1:3243404/150‑1 (MQ=255) ccTCTTCGCGGCTAAAGCCGCTCCTACTGGGGCTGCACCCGTCTCGAATGCCGTGGTGTACGTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGt < 2:1313873/150‑1 (MQ=255) tctTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCGGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCCGCGCCTGGTAGCCAGCCGCATCCAGCAACGTGTcc > 2:2731046/1‑150 (MQ=255) tctTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAAGGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTcc < 2:2442533/150‑1 (MQ=255) gtggggggCTACCGCGGCTCCGCCGGGGGCGGCACCCGTCTCGATTGCTGGGGTGTACGTGTGTGGGCGGGGTTTTCGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCa < 1:3101679/144‑1 (MQ=255) gcgGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTc > 2:563082/1‑150 (MQ=255) gCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGc < 2:4220260/150‑1 (MQ=255) aaaGCCGCTCCTACTGGGGCTGCACCCGTCTCGAATGCAGTGGTGTACCTGTTTCGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCgg < 1:329860/150‑1 (MQ=255) aaaGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCgg > 1:2167579/1‑150 (MQ=255) aGCCGCTCCTACTGGGGCTGCACCCGTCTCGACTGCTGTGCTGTACCTGTGTAGGTGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGt < 1:4121945/150‑1 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 1:314854/1‑150 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 2:2566794/1‑150 (MQ=255) cTCCTACGGGGGCTGCACCCGTCTCGACTGCTTGGGTGTACGTGTGTTGGCGGGGCTTTCCCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCtt < 1:1895343/150‑1 (MQ=255) cTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCtt > 1:3820607/1‑150 (MQ=255) cTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCtt > 1:1679751/1‑150 (MQ=255) cctcccggggCTGCACCCGCCTCTATTGCAGTGCGGTACCTGTGTCGGAGCGGCTTTCGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTgg < 1:3447262/144‑1 (MQ=255) tACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCt > 1:118790/1‑150 (MQ=255) aCAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCtt > 2:2866620/1‑150 (MQ=255) cAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTc > 1:3369066/1‑150 (MQ=255) aGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCa > 2:2921025/1‑150 (MQ=255) ggggCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCaa < 2:870386/150‑1 (MQ=255) ggggCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCaa < 2:3722711/150‑1 (MQ=255) gggCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAt > 1:3735334/1‑150 (MQ=255) gCTGCACCCGTCTCTATTGCTGTGCTGTACCTGTTTTGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAttt < 1:2520828/150‑1 (MQ=255) gCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAttt > 2:283836/1‑150 (MQ=255) tGCACCGTTATCGAATGCTGTGCTGTCCTTGTTTTGGTGGTGTTTTCGCCGCGAAGCAAGAAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGa < 1:2817820/150‑1 (MQ=255) tGCACCCGTCTCTAATGCTGTGGTGTACCTGTTTTGGAGGGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGa < 1:1780072/150‑1 (MQ=255) gccccccGCCTCGATTGCCGTGCGGTCCGTGTGTCGGAGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGa < 1:2044883/146‑1 (MQ=255) aCCCGTCTCGATTGCTGTGCTGTACCTGTGTTGGAGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGa < 1:653390/150‑1 (MQ=255) cccGTCTCTAATGATGTGCTTTACCTGTGTAGGCGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGAt < 1:2716639/150‑1 (MQ=255) cggTCTCTATTGCTGTGCTGTACCTGTGTTGGTGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATc < 1:4216941/148‑1 (MQ=255) ccGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATc > 1:4003596/1‑150 (MQ=255) ccGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATc < 2:3928521/150‑1 (MQ=255) gTCTCTATTGCTGTGCTGTACCTGTGTAGGAGGGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGAATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCa < 1:260649/150‑1 (MQ=255) gTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTATAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCa < 2:1762020/150‑1 (MQ=255) tctcGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCAc < 2:1854333/150‑1 (MQ=255) tcGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGa > 2:2791860/1‑150 (MQ=255) tcGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAACTTGAAGATCCACGa > 2:95979/1‑150 (MQ=255) gAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAAc > 2:45338/1‑150 (MQ=255) gAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAAc > 2:184666/1‑150 (MQ=255) gAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAAc < 2:1465913/150‑1 (MQ=255) tGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGt > 2:295862/1‑150 (MQ=255) tGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGt > 1:2016443/1‑150 (MQ=255) tGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGt > 1:783348/1‑150 (MQ=255) tGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGt > 1:982737/1‑150 (MQ=255) tGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGt > 2:2831265/1‑150 (MQ=255) tGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCATGGCTTCAATTTGAAGATCCACGAACCGt > 1:2749516/1‑150 (MQ=255) cAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTaa < 2:1340417/150‑1 (MQ=255) tGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGctct > 1:4050087/1‑150 (MQ=255) tGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGctct > 2:3040101/1‑150 (MQ=255) gTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCtt > 2:4117682/1‑150 (MQ=255) gTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCtt > 2:402643/1‑150 (MQ=255) cggtgtGGGTGGGGCTTGCGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGtt < 1:1558696/148‑1 (MQ=255) cTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGtt < 2:3842478/150‑1 (MQ=255) tgtgTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTc > 2:2525384/1‑150 (MQ=255) tgtAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTcag > 2:1458072/1‑150 (MQ=255) | CTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTCAGCA > NC_002947/5926420‑5926717 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |