| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,929,914 | T→G | 7.6% | intergenic (‑42/+111) | PP_5195 ← / ← fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,929,914 | 0 | T | G | 7.6% | 495.2 / 7.7 | 177 | intergenic (‑42/+111) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (64/95); new base G (16/2); total (80/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.21e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 178 total aligned reads displayed.
CAGGTCGATGGATTGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTT > NC_002947/5929765‑5930062 | aggaagtggcggcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggcccttt > 1:584146‑M1/149‑150 (MQ=255) aGGTCGATGGATTGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTc < 2:1124192/150‑1 (MQ=255) aagtggcggcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTcg‑c > 1:925034‑M1/146‑150 (MQ=255) aagtggcggcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTcg‑c > 2:1810127‑M1/146‑150 (MQ=255) tCGATGGAGTGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTcg‑cg < 1:1767711/150‑1 (MQ=255) agtggcggcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTcg‑cg > 2:1982168‑M1/145‑150 (MQ=255) gtggcggcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑Cgg > 2:1860259‑M1/144‑150 (MQ=255) gtggcggcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑Cgg > 1:2111118‑M1/144‑150 (MQ=255) gtggcggcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑Cgg > 1:4077551‑M1/144‑150 (MQ=255) gtggcggcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑Cgg > 2:443596‑M1/144‑150 (MQ=255) cGATGGATTGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑Cgg < 2:2494534/150‑1 (MQ=255) cGATGGATTGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑Cgg < 2:3530455/150‑1 (MQ=255) gATGGATTGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTGGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑Cggg > 2:3333430/1‑150 (MQ=255) ggcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTaaa < 1:3629996‑M1/12‑1 (MQ=255) gcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAAc > 1:3362082‑M1/138‑150 (MQ=255) gcgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaaacgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAAc > 2:3257891‑M1/138‑150 (MQ=255) aTTGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAAc < 1:2680293/150‑1 (MQ=255) ttGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAAcc < 1:4439133/150‑1 (MQ=255) cgtggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAAcc > 1:725337‑M1/137‑150 (MQ=255) tggggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAACCCg > 1:3131178‑M1/135‑150 (MQ=255) gCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGGGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGCG‑CGGGGGAAcccc > 1:1556976/1‑149 (MQ=255) ccAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTGG‑CGGGGAAAcaccc > 1:273214/1‑146 (MQ=255) ccAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGc < 2:3284704/150‑1 (MQ=255) ccAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGc < 2:3895536/150‑1 (MQ=255) gggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAACCCGCt < 2:2638168‑M1/18‑1 (MQ=255) gggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAACCCGCt < 2:522119‑M1/18‑1 (MQ=255) gggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAACCCGCt < 1:2275603‑M1/18‑1 (MQ=255) ggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAACCCGCTc > 1:3626819‑M1/132‑150 (MQ=255) ggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAACCCGCTc > 1:1153348‑M1/132‑150 (MQ=255) ggcagcttcaaggccgacagcattccggtggaaattgccggcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAACCCGCTc > 1:3792140‑M1/132‑150 (MQ=255) aGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGCG‑CGGGTAAAcccccac > 2:3863597/1‑146 (MQ=255) caacaGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTAc < 2:1462101/150‑1 (MQ=255) aacaGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACg < 2:1622279/150‑1 (MQ=255) acaGAATCACTCTCATGGTCAGCATCACCAATGCGGCGTTCAGGGAGACCGGGAGGTACCATCGGCGTTGGGTGGTTTGGGGCAAGTCTGAAATCTCGAGTTCGATGGCGACGGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACgt < 2:686981/150‑2 (MQ=255) cagcagCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACggg < 1:2541850/150‑1 (MQ=255) gcagcaCGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGa < 2:3156971/150‑1 (MQ=255) caCGCTCAGGGGCAGCAGCACCACGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGTGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTAGTTCG‑CGTGTAAACCCGCTCCTACGGGGACcgc < 1:2458739/150‑1 (MQ=255) caCGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACcgc < 1:4226565/150‑1 (MQ=255) caCGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACcgc < 1:138198/150‑1 (MQ=255) aCGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACcgcg < 1:36602/150‑1 (MQ=255) cTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCaa < 1:1729224/150‑1 (MQ=255) cTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGCG‑CGGGTAAAACCCCTCCAACGGGGACCCCGCac > 2:3822277/1‑149 (MQ=255) tCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAg < 2:4462917/150‑1 (MQ=255) gatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctttcgcgggtaaacccgctcctacaggatctgcactgccCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAgg > 1:2391191‑M1/102‑150 (MQ=255) gggCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGGAAACCCCCTCCGACGGGGCCCGCGCAAGGccg > 2:2851061/1‑148 (MQ=255) gggCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGGTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGGG‑GGGGGTACCCCCCCCCCACGGGGCCCccgccgggcgg > 1:74337/1‑143 (MQ=255) ggCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGt < 2:4200221/150‑1 (MQ=255) agcagcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGGTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGCG‑CGGGTGAACCCCCACCGACCGGGCCCCCCCAACGcccggca > 2:534746/1‑144 (MQ=255) cagcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAAAACCCGCCGACCGGGGCCCCCCCACGCAGTGCAGa > 2:383737/1‑150 (MQ=255) gcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTGG‑CGGGTAAAACCCCTCCTAACGGGACCCCCCCAGGCCGGGCAGaaa > 2:1245944/1‑148 (MQ=255) gcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATc < 1:3333546/150‑1 (MQ=255) gcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CCGGTAAACCCCCACCAACGGGGACCCCGCAAGGCAGTGCAGATc > 2:1251076/1‑150 (MQ=255) ccATGGCGTCGATCTGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGTTGTGGGGCACGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAATCCCGCTCCTACGGGGACCGCGCAAGGCTGTGAAGTTACTg < 2:908491/150‑1 (MQ=255) aaGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTa < 2:674914/150‑1 (MQ=255) aGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAg < 1:2670173/150‑1 (MQ=255) gcaagcgccaggctgaagccattcgcctgatggatcgggctggctacaactaagcgccaggctttatcctctttgggcccgttagggccctTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGc > 2:1204071‑M1/92‑150 (MQ=255) cgATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCgg < 2:3464424/150‑1 (MQ=255) cgATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCgg < 2:2569939/150‑1 (MQ=255) cgATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAAACCGCACCAACGGGGCCCCCCCAAGGCACTGCACAACCAGTAGGAGCgg > 2:3812777/1‑150 (MQ=255) gATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCggg < 1:2882217/150‑1 (MQ=255) gATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCGCCCACCGGGACCGCCCAAGGCACGGCAGATCCGGGAGGATCggg > 1:2635519/1‑150 (MQ=255) ggAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGGG‑CGGGTTAAAACCCACCAACGGGGGCCCCGCCAGGCCCGGCAGAAACATTATGAGCGGGTTTaac > 1:4294283/1‑148 (MQ=255) ggAGACCGGGAGGTACCAGCGGCGGTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGGGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCCCACCAACGGGGACCGCGCCAGGCCGTGCAGATCCGGGAGGAGCGGGTTTAcc > 2:1426358/1‑150 (MQ=255) gagaCCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTGG‑CGGGTAAAACCGCTACTACGGGGACAGCGCAAGGCAGTGCAGATAGTGTATGAGCGGGTTTAac‑c > 2:276175/1‑150 (MQ=255) gagaCCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTAcc‑c < 2:1536470/150‑1 (MQ=255) cGGGAGGTACCAGCGGCGTT‑GGGGGTGTGGGGCAAGGCTGAAATCTCGTGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGaaa < 1:2578561/150‑1 (MQ=255) gTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCACCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGcc > 2:3348186/1‑150 (MQ=255) gTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCC‑CGGGTAAAACCCCACCAACCGGGACCGCCCAACGCAGTGCAGATCCGGTAGGAGCGGGTTTACC‑CGCGCAAGGGcc > 2:289631/1‑150 (MQ=255) gTACCAGCGGCGGTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTAG‑CGGGTAAAACCGCTCCAAAGGGGTCCGCGCAATGCAGTGGAGATACTGTAGGTGGGGGTTTAAC‑CGCGAAAggggc > 2:961372/1‑148 (MQ=255) ccgcggggTGGGGGGGTGTGGGGAACGGCTTAAATCTCGAGTGCGAGGGCGACCGCGGCGGGGTGGTTGG‑CGGGTAACCCCGCTCCTACGGGGACCGCGCACGGCAGTGCAGATCCTGTCGGAGGGGTTTTACC‑CGCGAAAGGGCCCTaa < 1:1941163/148‑1 (MQ=255) cAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CCGGTAAAACCCCACCAAAGGGGACCCCGCAACGCACGGCACATACGGTAGGAGCCGGGTTAAC‑CGCGAAAGGGCCCGaa > 2:1336060/1‑150 (MQ=255) aGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAAACCGCTCCTACGGGGACCCCGCAAGGCCGTGGATATACTGTAGGAGCGGGTTTTCC‑CCCGAAAGGGCCCAAAc > 2:2410940/1‑150 (MQ=255) gcggcgTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGGGCCGGGGAAACCCCCACC‑AAGGGGGCCCCCCCAGGCCGGGCACAAGCGGGAGGAGGGGGTTTTCCACCCAAAAGGGccagacg > 1:1652163/1‑145 (MQ=255) cggcgTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGTTGGCGACCGCTGCGCGGTCGTTCG‑CGGTTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACgg < 1:3282787/150‑1 (MQ=255) tGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCTGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCaa < 1:3757547/150‑1 (MQ=255) ggggTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAaga < 2:1709411/150‑1 (MQ=255) ggggTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCCCCCCAACGGGGGCCGCGCCAGGCCGGGCAGATCCGGGATGGGCGGGTTTAGC‑CGCGCAAGGGCCCGAACCGGCCCCAaga > 1:2940117/1‑150 (MQ=255) ggTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAgg < 2:920039/150‑1 (MQ=255) ggggCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATaaa < 2:2467252/150‑1 (MQ=255) ggCATGGCTGAATTCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCTGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGc < 1:3743907/150‑1 (MQ=255) gCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCCCGCCGAAGGGGACCCCCCAAGGCAGTGCCGATCCAGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCGAACGGGCCCCAAGAGGATAAAGcc > 2:733201/1‑150 (MQ=255) aaGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCCCGCCTACGGGGTCCGCGCAAGGCAGTGCAGATACGGTAGGAGCGGGTTTACC‑CGCCCAAGGGCCCTAACCGGCCCCAAGAGGATAAAGccag > 2:2166036/1‑148 (MQ=255) gCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCCCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCAAACGGGCCCAAAGAGGATAAAGCCTGgcg > 2:3300348/1‑150 (MQ=255) cTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCCCACCAACCGGGACCCCCCCAGGCCCTGCAGATCCGGTAGGAGCGGGTTTACC‑CCCCAAAGGGCCCCAACGGGCCCAAAGAGGATAAAACCAGgcgc > 2:3629974/1‑150 (MQ=255) tGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAAACCCCTCCTAAGGGGCCCGCGCAAGGCAGGGCCGATACGGTAGGAGCGGGTTTTAC‑CCCCCAATGGCCCAAAAGGGCCCAAAGAGGATAAAACCCGgcgcg > 2:1582815/1‑149 (MQ=255) tGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGCGCCGGTTAAACCCCACCCAACGGGG‑CCCCCCAACGCCCGGGACATACGGTTGGGGCCGGTGTGCC‑CGCCAAACGGCCCCAACCGGCCCCAAAAGGGTAAAACCGGgggcg > 2:754670/1‑149 (MQ=255) aaaTCTCGTGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑GGGTTAAACCCGCTCCTAGGGGGACCGCGCAAGGCTGTGCAGATCGTGTCGGAGGGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTa < 1:3968897/150‑1 (MQ=255) tcgcgcgCGATGGCGACCGCTGCGCGGACGCTCG‑CGGGTCAACCCGCGCCCACGGGGACCGCGCAAGCCAGTGCTCATCCTGCAGGCGCGGGTTTACC‑CGCGAAAGGGCCCTCACGGGCCCAAAGCGGATAAAGCCTGGCGCTTAGTTGt < 1:830930/144‑1 (MQ=255) tcGTGTGCGATGGCGACCGCTGCGCGGTCGTGCG‑CGGGTAACCCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACG‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGt < 2:2278908/150‑1 (MQ=255) cGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAGCGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTa < 2:2236749/150‑1 (MQ=255) cGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTa < 2:771059/150‑1 (MQ=255) gATGGCGACCGCTGCGCGGTCGTTGG‑CGGGTAAAAACCCACCAAAGGGGAACGCCCAAATCAGTGCAGATACAGTAGGAGCGGGTTTAAC‑CGCGAAATTGCCCAAAAGGGCCCAAAAATGATAAAAACTTGCGCTTATTTTTatacagcc > 2:1730569/1‑150 (MQ=255) gATGGCGACCGCTGCGCGGTCGTGCG‑CGGGGGCACCCCCGCCCACCGGGCCCCCGCCCGGCAGGGCCGAGCCCGTCGGCGCGGGGTTGCC‑CGCCCAACGGCCCAAACCGGCCCCAAGAGGAGAAACCCAGGCGCGGAGGTGTagcccccc > 2:2008176/1‑146 (MQ=255) gACCGCTGCGCGGTCGTTCG‑CGGGTAAAAACGCAACAAAGGGGACCCCGCAAGGCAGTGCAGAAACTGTAGGAGCGGGTTTAAC‑CGCGAAAGGGCCCCAACGGGCCCCAACAGGATAAAGCCGGGCGCGGGGTTGTAGCCACCCCGATcc > 2:3673970/1‑150 (MQ=255) cGCTGCGCGGTCGTTCG‑CGGGTACACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATc < 1:1013417/150‑1 (MQ=255) cGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATc < 1:1013376/150‑1 (MQ=255) gcggcgcGGTCGTTCG‑CGGGTAAACCCGCTCCTCCGGGGACCGCGCACGGCAGTGCAGATCCTGTAGGAGCGGTTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCa < 1:3440214/147‑1 (MQ=255) cTGCGCGGTCGTTCG‑CGGGGAAACCCCCTCCGACCGGGACCCCGCAAGGCAGTGCCGATACAGTAGGAGCGGGTTTACC‑CCCCAAAGGGCCCGAACGGGCCCAAACATGATAAAGCCAGGCGCCTAGTTGTAGCCACCCCGCTCCATCac > 2:4410487/1‑149 (MQ=255) gcgGTCGTTCG‑CGGGTAAAACCCCACCTACGGGGACCGCGCAAGGCAGTGCAGATCCGGTAGGGGCGGGTTTACC‑CCCGGAAGGGCCCTAACGGGCCCCAAGAGGCTAAAGCCAGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGa > 2:4270971/1‑150 (MQ=255) gTTCG‑CGGGTAACCCCGCTCCTACGGGGACCGCGAATGGCTGTGCAGATCCTGTAGGCGCGGTTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCt < 1:383737/150‑1 (MQ=255) | CAGGTCGATGGATTGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCG‑CGGGTAAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGCGGGTTTACC‑CGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTT > NC_002947/5929765‑5930062 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |