| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,110 | T→G | 10.9% | intergenic (+80/‑208) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,110 | 0 | T | G | 10.9% | 266.2 / 20.5 | 97 | intergenic (+80/‑208) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (48/38); new base G (8/3); total (56/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
CGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGT > NC_002947/444961‑445258 | cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Att < 2:152969/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 1:779342/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 1:4272677/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 1:4272587/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 2:2591090/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑Atttt < 1:2871040/150‑1 (MQ=255) cTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTTAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGt < 1:4239790/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGG‑GTGCCCGCGCATGCGGGCCCTCAGCCAACACAtttttg > 2:3966465/1‑148 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTc < 2:858133/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTc < 1:3665901/150‑1 (MQ=255) gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGG‑GTGCCCCCGCAAGCGTCCCATCACACAACC‑AATTTGtgttg > 2:3149771/1‑146 (MQ=255) gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTgg < 2:1216446/150‑1 (MQ=255) gcgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTgg < 2:1216374/150‑1 (MQ=255) cAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAAATCGTCCGATCAGACAACA‑AATTTTTGTGGtgg > 2:1848665/1‑148 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCgg < 1:1119070/150‑1 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCgg < 2:3269220/150‑1 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGAC‑TTTCCCGCGAATGCGTCCGATAAGACAACA‑ATTTTGTCTGGTCgg > 2:1334246/1‑150 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTTCCCGCGAATGCGTCCGATCAGAAAAAA‑ATTTTGTCTGGGAGGGc > 2:2167607/1‑150 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGc < 1:1285967/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGc < 1:1286212/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGc < 1:1286283/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑GTGCCCGCCAAAGCGTCCGATCAGAAAAAA‑AATTTGTGTGGTGGGGc > 2:2167661/1‑150 (MQ=255) cgtcAAGGCATCCGACGAAATGCTTGGCCTGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAA‑TTGTTGTCTGATCggacgcat < 1:1362749/150‑7 (MQ=21) aaGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTcgc < 1:2671737/150‑1 (MQ=255) aaGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTcgc < 1:415889/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATGTTGTCTGGTCGGGCCTCTTcgcg < 2:3833341/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACGTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTGTGTCTGGTCGGGCCTCTTCGCgg < 2:4068803/150‑1 (MQ=255) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAA‑TTGTTGTCTGATCGGACGCATTCGCggg < 2:406792/150‑1 (MQ=18) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACGTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCggg < 2:1119492/150‑1 (MQ=255) cATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGc < 1:235520/150‑1 (MQ=255) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTATGGTCGGGCCACTTCGCCGGCaa > 2:2967771/1‑150 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGc < 1:1532747/150‑1 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAAAGCGTCCGATCAGACAACC‑ATTTTGTATGGTGGGGCCTCGTCGCGGGCAAGc > 2:2628377/1‑150 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGcc < 1:1438010/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGcc < 1:1607538/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGcc < 2:837072/150‑1 (MQ=255) gggCCGCATCATCGACACCTACGCCTTAATACTTGCGACATCCCCTTTTTCAGCGCCTGCGTTGGCGGAGGGGGC‑TTGCCGGCTAATGCGTCCTATCTTAAAACA‑TTTTTGTGTGGGGGGGCCTCTCCGGGGGCAAGCCCGCTCCTACaa < 2:1463008/149‑1 (MQ=255) ccGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGG‑ATGCCCCCCAATTCCTACGATAAGACAACA‑ATTTTGTCAGGTCGGGCCTCTTCCAGGGCCATCCCCCGCCGACAAcgg > 2:1019611/1‑150 (MQ=255) tcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑GTGCCCCCGGAAGCCGCCGGGCAGGCAACC‑ATTTTGTGGGGGCGGGGCGCATCGCGGGCCAGCCCCCGCCGACAACGGGTTGtggg > 2:2531054/1‑149 (MQ=255) tcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑GTGCCCCCCCATGCGGCCCCTCAGACAACC‑ATTTTGTCGGGGGGGGCCGCATGGCGGGCCACCCCGCGCCGACAAGGGGTTGtggg > 2:2531046/1‑149 (MQ=255) acacCTCCGCCTCAATACTGGCGACCCCCCCTTTTGCCGCGCCTCCCTTGTGGGCGGGGGC‑TGGCCCGGTATGGGGCCCTATCACACACCA‑TTTTTGTGGGGGGGGGCCGCTCCGGGGGCACGCCCGCTCCTACAAGGGTTTGtggcatg < 2:3895915/150‑1 (MQ=255) cccTACGCCTGACTCCGGGCGTCACCCCCTATTTCCGCGCCGGCCTTGTAGGAGCGGGC‑TTGCCCGCGACTGGGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatggc < 2:2568861/149‑1 (MQ=25) acCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCTAATGCGCCCGATCAGACAACA‑TTTTTGTCTGGTCGGGCCTCTTGGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatggc < 2:2568753/150‑1 (MQ=255) cctcccccTCAATCCTGGCGACACCCCCTATTCCAGCCCCGGCCTTGTAGGAGGGGGC‑TGGCCCGCCAAGGCGCCCGAACAGACACCA‑ATTTTGGGGGGCGGGGCCTCCCCGGGGCAAACCCCGCTCCTACAAGGGTTTGtggcatggca < 2:3440447/144‑1 (MQ=255) cTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTTCCCCCCCAAGGCG‑CCGCTCAGAAAAAA‑AATTTTTATGGTGGGGGCTCGTAGCCGGCCACCCCCCGACCAAAACGGGGTGTGGGATGGGATGaaata > 2:1747790/1‑146 (MQ=255) tCACCCCCTATTTCCGCGCCGGCCTGGTCGGCGGGGGC‑TGGCCCGCGAATGCGTCCGATCATCAAAAA‑ATTTGGCCGGGTCGGGCCTCTTCGGGGGAACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTc < 2:3273040/150‑1 (MQ=255) cATCCCCTATTTCAGCGCCTGCCTTGTCGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGCCAACA‑ATTTGGTCTGGGCGGGCCTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCg < 2:4107782/150‑1 (MQ=39) ccccccTCTTCCCGCCCCGGCGTTGTCGGCGCGGGC‑TTGCCCGCGAATGGGCCCGAACACACAACA‑ATTTTGGGGGGGCGGGCCCCTGCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGt < 2:3974916/148‑1 (MQ=255) aTCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGACCATACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGt < 2:4013616/150‑1 (MQ=255) tCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGG‑TTTGCCGCCGCAGCGTACCCTACTACAACA‑AATTTTTGGGGTGGGGCGGCTTAGCGGGCAACCCCGCGCCTACCAGGGTTTGTTGGATGGGCTGACAGGTTTTACAattttattt > 2:4401789/1‑146 (MQ=255) cTATTCCCGCGCCTGCCTTGTCGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGt < 2:710547/150‑1 (MQ=255) ccctgcctTGTTGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTGTGTCTGGTCGGCCCTATTCGGGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCAcc < 2:4428267/149‑1 (MQ=38) attcgCGGGC‑AAGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc > 2:4095695/5‑150 (MQ=255) ttGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:4325168/1‑150 (MQ=255) ttGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 2:3317202/1‑150 (MQ=255) ttGCCCGCGAAGAGGCCCGACCAGACAAAA‑TTGTTGTCTGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:893715/1‑150 (MQ=17) tGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAGTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAg > 1:3261976/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGGCTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1762061/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:1427949/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1996289/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:4502842/1‑150 (MQ=255) acgcgAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:3543912/2‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCg > 2:3888550/1‑108 (MQ=255) cgcgAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCg < 1:3888550/108‑1 (MQ=255) gcgAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg > 2:3781449/1‑150 (MQ=255) ccacggcgcCCGACCACCCAACA‑TGTTGGTCGGGCCGGCCCCCGCCGCGGCCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGc < 1:2842418/145‑1 (MQ=255) aTGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 2:3854862/1‑150 (MQ=255) gcccGACCAGACAAAA‑TTGTTGTCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 1:1581323/3‑150 (MQ=38) gTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 1:1747552/1‑150 (MQ=255) tCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 1:2979977/1‑150 (MQ=255) tCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 2:3311984/1‑150 (MQ=255) ccGACCAGACAAAA‑TTGTTGTCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTaa > 1:2766510/1‑150 (MQ=38) ccGACCAGACAAAA‑TTGTTGACTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTaa > 2:3440705/1‑150 (MQ=38) gaccAGACAAAA‑TTGTTGTCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt > 1:4199226/4‑150 (MQ=38) gaccAGACAAAA‑TTGTTGTCTGATCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt > 1:4199568/4‑150 (MQ=38) gATCAGACAACA‑ATGTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCAAAGTCCATCCGTGACAGAAAGAAGAGATAAACGTAAGt > 1:1694232/1‑150 (MQ=255) aTCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 2:2139525/1‑150 (MQ=255) aTCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 2:2139359/1‑150 (MQ=255) aTCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 2:2230677/1‑150 (MQ=255) aTCAGACAACA‑ATTTTGTCTGCACGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTTTGGCATGGCATGACAGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAgat > 1:2794525/1‑148 (MQ=255) cAGACAAAA‑TTGTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTc > 1:1179806/1‑150 (MQ=255) ccacaaca‑ATTTTGTCTGGTGGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCa < 2:3652350/148‑1 (MQ=255) gACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTg > 1:2844663/1‑120 (MQ=255) gACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTg < 2:2844677/120‑1 (MQ=255) gACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTg < 2:2844663/120‑1 (MQ=255) gACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTg > 1:2844677/1‑120 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAATTTTCAaaca > 2:2335754/1‑150 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:1602754/1‑150 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:1319069/1‑150 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:455824/1‑150 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:3284978/1‑150 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:703413/1‑150 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:1330467/1‑150 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:2457980/1‑150 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:2841810/1‑150 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:3007582/1‑150 (MQ=255) aaca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTGTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:3141458/1‑150 (MQ=255) ca‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 1:664904/1‑150 (MQ=255) a‑aTTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 2:2658562/1‑150 (MQ=255) ttttGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGt < 2:4076612/150‑1 (MQ=255) | CGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACA‑ATTTTGTCTGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGT > NC_002947/444961‑445258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |