| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,175,181 | A→G | 5.2% | intergenic (‑122/+68) | PP_5410 ← / ← glmU | DeoR family transcriptional regulator/bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,175,181 | 0 | A | G | 5.2% | 690.1 / 15.0 | 208 | intergenic (‑122/+68) | PP_5410/glmU | DeoR family transcriptional regulator/bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (104/92); new base G (8/3); total (113/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 208 total aligned reads displayed.
TGTGGTGTGTTTCGTTTCGACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGC > NC_002947/6175037‑6175329 | gtgtgtTTCGTTTCGACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCa > 1:680327/1‑150 (MQ=255) tgtgtTTCGTTTCGACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCaa > 2:1186000/1‑150 (MQ=255) tgtgtTTCGTTTCGACATGTGCGTTTAAGTTTCGATTCCAAAGTTAATGGTTGCAATCAAAACCTAAGAAGAGAGATTCGTCAAGATGTCGCTGACCTGTGTATTGTTTGCTTCTGCTTTGAGGCTGTAATATATCAGCAGCCGCGCCaa > 1:834028/1‑150 (MQ=255) ttcgtttcgACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCGGCTGCGCCtatagga < 2:2488251/150‑4 (MQ=255) ttcgtttcgACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATaaaa < 2:413473/150‑1 (MQ=255) tttcgACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGc > 1:706900/1‑150 (MQ=255) cgACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGa < 1:3644085/150‑1 (MQ=255) cgACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGa < 1:4369392/150‑1 (MQ=255) cgACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGa < 2:400636/150‑1 (MQ=255) aCATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACt > 1:625400/1‑150 (MQ=255) cATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACtt < 2:3188545/150‑1 (MQ=255) cATGAGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACtt < 2:4336438/150‑1 (MQ=255) tgCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTc < 2:214794/150‑1 (MQ=255) tgCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTc < 1:518876/150‑1 (MQ=255) cGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTcac > 1:2676446/1‑150 (MQ=255) tttAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTAtgtgaat < 1:876633/150‑7 (MQ=255) tttAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTAtgtgaat < 2:847735/150‑7 (MQ=255) tttAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTAtgtgaat < 2:767690/150‑7 (MQ=255) tAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATaa < 1:125772/150‑1 (MQ=255) aGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGt < 1:576824/150‑1 (MQ=255) ttcgattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCgg < 2:3082644/150‑1 (MQ=255) ttcgattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCgg < 1:3107948/150‑1 (MQ=255) tcgattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGc < 2:4238021/150‑1 (MQ=255) tcgattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGc < 2:2427306/150‑1 (MQ=255) gattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCtt > 1:2713355/1‑150 (MQ=255) gattcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCtt > 1:3447649/1‑150 (MQ=255) attcgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCttt > 1:4379213/1‑150 (MQ=255) cgaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGa < 1:1062473/150‑1 (MQ=255) gaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGag > 1:3476115/1‑149 (MQ=255) gaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGAt < 1:3679615/150‑1 (MQ=255) gaAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGAt > 1:820045/1‑150 (MQ=255) aaaGTTAATGGTTGCTATCAAACCCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATg < 2:2262654/150‑1 (MQ=255) ttAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGaaa > 1:3986457/1‑150 (MQ=255) aaTGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAgg > 2:355153/1‑150 (MQ=255) aaTGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAAGAAAATAGCCGACTTATTCACATAAGTCGGCTTTCGAGGGACAgg > 2:2612907/1‑150 (MQ=255) aTGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAggg < 2:2676584/150‑1 (MQ=255) ttGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtgt < 2:1153362/150‑1 (MQ=255) tGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCtgtg < 2:1098237/150‑1 (MQ=255) gCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGa > 2:1522204/1‑150 (MQ=255) aaTCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCTCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAAt > 2:222605/1‑150 (MQ=255) aaTCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAAt > 1:650772/1‑150 (MQ=255) aTCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATa > 1:2452618/1‑150 (MQ=255) tCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATaa > 1:4470977/1‑150 (MQ=255) tCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATaa > 2:1459637/1‑150 (MQ=255) tCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATaa < 1:3837823/150‑1 (MQ=255) tCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATaa > 1:3377576/1‑150 (MQ=255) aaaCCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTc > 2:3022670/1‑150 (MQ=255) aaCCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCa < 2:2730323/150‑1 (MQ=255) aGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCtctt < 1:4118566/150‑1 (MQ=255) gACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCtcttc < 1:4019093/150‑1 (MQ=255) gACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCtcttc < 2:2032418/150‑1 (MQ=255) gACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCtcttc < 1:1743652/150‑1 (MQ=255) aCGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCtcttct < 2:3447649/150‑1 (MQ=255) cgcgATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGa < 2:4368280/150‑1 (MQ=255) cgcgATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGa < 1:3332091/150‑1 (MQ=255) cgATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAATGGGCTGTGAATAACTCAGCTCTTCTTGAtc < 2:1123850/150‑1 (MQ=255) tCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCg > 1:4144818/1‑150 (MQ=255) tCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCg > 1:2822820/1‑150 (MQ=255) gTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCtt < 2:3659724/150‑1 (MQ=255) gCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCa > 2:1784319/1‑150 (MQ=255) cTGACCTGTGGAGTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCGTCTTGATCTTCTCCGGGCGCTTCCAg > 1:969553/1‑150 (MQ=255) ccTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCg < 2:1953655/150‑1 (MQ=255) tgtgGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGaa > 2:3873568/1‑150 (MQ=255) tgtgGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGaa > 2:612851/1‑150 (MQ=255) tgGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAAt > 2:1717517/1‑150 (MQ=255) tgGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAAt > 1:3579320/1‑150 (MQ=255) gATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGt < 2:3798993/150‑1 (MQ=255) aTTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGtt > 1:1419681/1‑150 (MQ=255) aTTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGtt < 1:1793371/150‑1 (MQ=255) aTTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGtt < 1:1573586/150‑1 (MQ=255) aTTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGtt < 2:680327/150‑1 (MQ=255) ttGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTg < 2:1399923/150‑1 (MQ=255) ttGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTg < 1:4292663/150‑1 (MQ=255) tttGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTgcgc > 1:2604085/1‑150 (MQ=255) tttGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTgcgc > 1:2852507/1‑150 (MQ=255) tGCGTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTg < 1:3777050/150‑1 (MQ=255) ttCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcg > 1:4157690/1‑150 (MQ=255) tCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcgc < 1:1334631/150‑1 (MQ=255) cTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcgcg > 1:2030586/1‑150 (MQ=255) cTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcgcg > 2:1391585/1‑150 (MQ=255) tGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcgcgc < 2:1815558/150‑1 (MQ=255) tGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCAAAATGTTGCGCTGgcgcgc < 2:1066941/150‑1 (MQ=255) cTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCAc > 1:1499294/1‑150 (MQ=255) tttGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACg > 1:2929579/1‑150 (MQ=255) ttGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACgg > 1:1782318/1‑150 (MQ=255) cttttttattGGCGCGGCTGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACa > 1:3062802/7‑150 (MQ=255) cGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACa < 1:2226608/150‑1 (MQ=255) cGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACa < 1:146385/150‑1 (MQ=255) ttttttattGGCGCGGCTGCGCCTATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAg > 1:1154516/6‑150 (MQ=255) cTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAg < 2:2238543/150‑1 (MQ=255) cTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAg > 1:473982/1‑150 (MQ=255) cTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGAGGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGcccg > 2:4447782/1‑148 (MQ=255) tataGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAgg > 1:2945516/1‑150 (MQ=255) ataGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGt < 1:716535/150‑1 (MQ=255) ataGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCAAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGt > 2:1054185/1‑150 (MQ=255) ataGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTGCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGt > 2:87704/1‑150 (MQ=255) ttggCGCGGCTGCGCCTATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGGGCTTCCAGCCCGAAATGTTGCGCTGgc > 2:3430643/3‑128 (MQ=255) aGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCa < 2:256369/150‑1 (MQ=255) cAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGc < 2:3673093/150‑1 (MQ=255) cAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGc > 2:1906375/1‑150 (MQ=255) | TGTGGTGTGTTTCGTTTCGACATGTGCGTTTAAGTTTCGATTCGAAAGTTAATGGTTGCAATCAAAACCTAAGACGCGCGATTCGTCAAGCTGTCGCTGACCTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGC > NC_002947/6175037‑6175329 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |