Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 97,594 | A→C | 5.7% | intergenic (+23/+13) | PP_0090 → / ← PP_0091 | hypothetical protein/putative lipoprotein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 97,594 | 0 | A | C | 5.7% | 429.0 / 8.7 | 155 | intergenic (+23/+13) | PP_0090/PP_0091 | hypothetical protein/putative lipoprotein |
Reads supporting (aligned to +/- strand): ref base A (74/68); new base C (4/7); total (78/77) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.62e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 164 total aligned reads displayed.
GCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCAAAGC > NC_002947/97446‑97743 | gCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAag > 1:4246042/1‑150 (MQ=255) cccAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagc < 1:3664007/150‑1 (MQ=255) cccAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagc < 2:2428819/150‑1 (MQ=255) cccAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAagc > 2:2653972/1‑150 (MQ=255) gggTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGcccc < 2:4072275/150‑1 (MQ=255) ggTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCca < 2:3422595/150‑1 (MQ=255) gTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCTTCGCAGccccgg < 1:2072243/150‑3 (MQ=255) gTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCcac > 2:1042564/1‑150 (MQ=255) tttCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCTGGGGCTGCTTCGCAGccccggg < 2:1528288/150‑4 (MQ=255) tttCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCTGGGGCTGCTTCGCAGccccggg < 2:2618548/150‑4 (MQ=255) tCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGGACCAGCCCCacaca > 1:3917527/1‑149 (MQ=255) gTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGCAGCAGCCCCACACTCa > 1:2384935/1‑150 (MQ=255) tCCTACACGGTGGATATCGTGCCCAACAGCGAGGTAAAGGACCAGAACTTGGTCGTGGGTACCTGCTATGGCGGGACGAAGAAGATAATCTATCAGAAGAACGATCTATAAGAATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCAc < 2:3173009/150‑1 (MQ=255) ccTACACGCTGGAGATCGTGCCCAACAGCGAGGTCACGGACCTTAACATGGTCGTGGGGACCTGCGATGGGGGGACGAATAAGATAATATATCAGAAGAACGATCTATAAGCATCTGGGCCGGGGGCTGCGACGCAGCCCCACACTCACg < 2:643647/150‑1 (MQ=255) acacGCTGGAGATCGTGCCCAACCGCGAGGTCAAGGACCATAACATGGTGGTGGGGACCCGCTTTGGCGGGACGAAGATGATCATCTATCAGAAGAAGGATCTATAAGAATCTGGGCCGGGGGCTGCTATGCTGCCCCACACTCACGGGa < 2:2292002/150‑1 (MQ=255) cacGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGAt > 2:2656767/1‑150 (MQ=255) cacGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGAt > 1:2996596/1‑150 (MQ=255) acGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATg > 1:615900/1‑150 (MQ=255) gCTGGAGATCGTGCCCAACAGCGTGGTCACGGACAAGAACTTGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCa < 2:1208879/150‑1 (MQ=255) gCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCa > 1:2607801/1‑150 (MQ=255) gCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCa > 2:3499306/1‑150 (MQ=255) tGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGa > 1:3107111/1‑150 (MQ=255) ggAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACAAGGGATGCAGaa > 1:2541682/1‑150 (MQ=255) tGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGc > 1:1453237/1‑150 (MQ=255) tGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACACGTCGc > 2:13820/1‑150 (MQ=255) ggCCCAACCGCGCGGTCAAGGACCAGAACCTGGTCGGCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCACAAGAACGATCGATAAGAATCTGGGCCCGGGGCGGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGc < 2:3886689/149‑1 (MQ=255) ccAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACATCGCTAg > 1:3198570/1‑150 (MQ=255) cAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACACATCGCTAgg > 1:3484029/1‑150 (MQ=255) aaCAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGGCCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGc > 2:2949989/1‑150 (MQ=255) aaCAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGGGGCGAAGCAGCCCCACACACACCGGATTCAGAACAAATCGCTAGGc > 1:402758/1‑150 (MQ=255) aaCAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGc < 2:2957058/150‑1 (MQ=255) aaCAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGc > 2:2853020/1‑150 (MQ=255) accgCGAGGTCCCGCACCAGAACTTGGTGGTCGGGACCTGCGAGGGCGGTACGAAGACGATCATCTATAAGAAGAACGATCGATAAGCATCCGGGCCGGGGGCTGCGCAGCCGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCt < 2:127279/147‑1 (MQ=255) gCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGt < 2:359737/150‑1 (MQ=255) gTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCACCCCCACACAAACCGGATGCACAAAACAAAGCTAGGCTCGTTaacc > 1:2819774/1‑150 (MQ=255) tCAAGGACCTGAACATGGTCGTCGGGACCTGCTTTGGCGGGACGAAGAAGATCATATATCAGAAGAACGATCGATAAGAATCAGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcacca < 1:4140626/150‑1 (MQ=255) tCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcacca > 2:725639/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACATTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcaccacc < 1:942009/150‑1 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcaccacc > 2:3948252/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTcaccacc > 1:1827057/1‑150 (MQ=255) aaGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCAGAACACTTCGCTAGGCTCGTTcaccacc > 1:1765934/1‑150 (MQ=255) aGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACCGGATGCAGAACACATAGCGAGGCTCGTTaaccacca > 1:3392665/1‑150 (MQ=255) ccAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCtt > 2:1019646/1‑150 (MQ=255) cAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCACCCCCACACACACGGGATGCAGAAAAAATAGCTAGGCTCGTTCACCACCACCATg > 1:2713990/1‑150 (MQ=255) gaactgggTCGTGGGGCCCTGGGTGGGCGGGACGAATACGATAATATATCAGAAGAACGATCGATAAGAATCCGGGCGGGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCg < 1:3939558/144‑1 (MQ=255) aaCATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCgg < 2:4327183/150‑1 (MQ=255) cttGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGtt < 2:1314267/148‑1 (MQ=255) cATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGtt < 2:1453237/150‑1 (MQ=255) cgtcgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCGGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTc < 2:2364880/150‑1 (MQ=255) gtcgGGCCCTGCTATGGCGGTACTAACAATATAATATAACAGAACAACGATCTATAACCAACAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCa < 1:2801898/150‑1 (MQ=255) gtcgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATATGCATCCGGGCCGGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCa < 2:1740366/150‑1 (MQ=255) ggggACCTGCTTTGGGGTTACTAATAATATATTCTATCATAATAAGGATCTATAAGCATCTGGGCCGGGGGCGGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCata < 1:4213113/149‑1 (MQ=255) cgGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGGTGCGAAGCAGCCCCACACACACGGGATGCAGAAAACATCGCGAGGCGCGTTCACCACCCCCATGCGGTTGGGGTCata > 1:3093393/1‑150 (MQ=255) aCCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACGTCGCTAGGCTCGTTCACCACCACCATGCGGTTGGCGGCATATagc > 2:1536941/1‑150 (MQ=255) ccTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATagca < 2:572815/150‑1 (MQ=255) tGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACAAGGGATTCAGAACACATAGCAAGGCGCGTTAACCACCCCCATGCGGTTGGCCGCAAAAATCAGCAccag > 1:1740724/1‑148 (MQ=255) ggCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCCAAGCAGCCCCACACTCACGGGATGCAGAACACTACGCTAGGCTCGTTCACCACCACCATGCGGTTGGCGTCCTATAGCAGCACCAGc > 2:1593502/1‑150 (MQ=255) gaagaaGATCATCTATCAGAAGAACGATCGATAAGAATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCAt < 2:2769574/150‑1 (MQ=255) agaataTAATCTATCAGAAGAACTATCTATATGCATCTGGGCCGGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCa < 2:1598809/150‑1 (MQ=255) agaagaTCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACGCACGGGATGCACAACAATTAGCTAGGCTCGGTCACCACCCCCATGCGGTTGGCGTCATATAGCAGCACCAGCGGCTCCATCa > 1:2870193/1‑150 (MQ=255) agaTCATCTTTCTGAAGAACGATCGATAAGCATCTGGGCCCGGGGCTGAGAAGAAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGAGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCg < 1:2581070/150‑1 (MQ=255) tcatcTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGCAGCAGCCCCACACACACCGGATGCAGAACACGTCGCTAGGCTCGTTCACCCCCACCATGCGGTTGGCGTCAGATAGCAGCACCTGCGGCTCCATCACCGgcg > 2:2013919/1‑150 (MQ=255) tcatcTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGACCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCAGAGGCTACAACACCcgcg > 2:3301188/1‑150 (MQ=255) tATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCACCCCCACACTCACGGGATGCAGAAAACTTAGCTAGGCTCGTTCAACAACAACTTGCGGTTTGCGTCATATAGCAGCACCAGCGGCTCCATCACCGGCGCCcgc > 2:138835/1‑150 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCgcgc > 2:3458259/1‑150 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCgcgc < 2:4367965/150‑1 (MQ=255) tCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGCTGCAGAACACATAGCTAGGCTCGTTCACCACCACCATGCGGTTGGCGTCATATAGCAGCACCGGCGGCTCCAACACCGGCGCCCgcgc > 1:4417859/1‑150 (MQ=255) taataaCTATCTATAAGCATCAGGGCCGGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTc < 1:3276559/146‑1 (MQ=255) gaagaaCGATCGATAAGCATCAGGGCCCGGGGCTGCGGAGCAGCCCCACACACACGGGATGCAGAAAACTTGGCTAGGGTCGTTGACCACCACCTTGGGGTTTGCGTCATATATCAGCACCTGCGGGTCCATCACCGGCGCCCGCGCttg > 2:1596592/1‑149 (MQ=255) agtatctatAAGCATCTGGGCCGGGGGGGGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGc < 1:2713868/147‑1 (MQ=255) aCGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGc < 2:2898588/150‑1 (MQ=255) gatAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAgc > 2:2295163/1‑150 (MQ=255) atAAGAATCAGGGCCCGGGGCTGCTAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAgcg < 2:4291034/150‑1 (MQ=255) gCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGCTAGCGCTCg > 2:3156340/1‑150 (MQ=255) gCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACACACGGGATGCCGAACACTTCGCTAGGCTCGTTCACCACCACCGTGCGGTTGGCGGCATATATCAGCACCAGCGGCTCCATCACCCGCGCCCCCGCATCCAGGCGATAGCGCTCg > 2:3156359/1‑150 (MQ=255) aTCAGGGCCCGGGGCTGCGAAGCCGCCCCACACGCACGGGATGCAGAACACATCGCGAGGCGCGGTCACCACCACCATGCGGTTGGCGTCATATAGCAGCACCGGCGGCTCCCTCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGcc > 2:1692071/1‑150 (MQ=255) tCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCg < 2:3671114/150‑1 (MQ=255) gggCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGcc < 2:897554/150‑1 (MQ=255) gggCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGcc < 1:1100816/150‑1 (MQ=255) tgtggggCTGCTTCGCAGCCCCGCACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTg > 1:2594880/4‑150 (MQ=255) cccGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTg > 2:3930410/1‑150 (MQ=255) cccGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTg < 2:1127636/150‑1 (MQ=255) gtggggCTGCTTCGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGa > 2:1113602/3‑150 (MQ=255) tggggCTGCTTCGCAGCCCCGCACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGaa > 2:3178496/2‑150 (MQ=255) cGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGaa < 2:3107111/150‑1 (MQ=255) cGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGaa < 2:1527767/150‑1 (MQ=255) ggggCTGCGATGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAg < 2:1540026/150‑1 (MQ=255) ggggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAg > 1:1538955/1‑150 (MQ=255) ggggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAg > 1:1538595/1‑150 (MQ=255) ggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGtt < 2:378380/150‑1 (MQ=255) ggCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGtt < 2:1538595/150‑1 (MQ=255) gCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTg < 2:2768807/150‑1 (MQ=255) cTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCGTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGt > 2:3829390/1‑150 (MQ=255) tGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTc > 1:883667/1‑150 (MQ=255) tGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTc < 2:3445880/150‑1 (MQ=255) tGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTc > 1:1395521/1‑150 (MQ=255) tGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTc > 1:1395289/1‑150 (MQ=255) gAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCaaa > 1:3124544/1‑150 (MQ=255) gAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGAGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTAGTCaaa > 2:4155410/1‑150 (MQ=255) agcagcCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCAAAGc < 1:1024731/150‑1 (MQ=255) | GCCCAAGGGGTTTCGTCCTACACGCTGGAGATCGTGCCCAACAGCGAGGTCAAGGACCAGAACATGGTCGTCGGGACCTGCGATGGCGGGACGAAGAAGATCATCTATCAGAAGAACGATCGATAAGCATCAGGGCCCGGGGCTGCGAAGCAGCCCCACACTCACGGGATGCAGAACACTTCGCTAGGCTCGTTCACCACCACCTTGCGGTTGGCGTCATATAGCAGCACCTGCGGCTCCATCACCGGCGCCCGCGCTTCCAGGCGATAGCGCTCGCCGGCCTTGAAGTTGTCAAAGC > NC_002947/97446‑97743 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |