| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 546,017 | T→C | 5.4% | intergenic (+54/‑19) | rpoC → / → PP_mr08 | DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 546,017 | 0 | T | C | 5.4% | 644.7 / 16.7 | 205 | intergenic (+54/‑19) | rpoC/PP_mr08 | DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA |
| Reads supporting (aligned to +/- strand): ref base T (72/117); new base C (2/9); total (74/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.76e-01 | |||||||||||
Only 100 of 208 total aligned reads displayed.
CGCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAATCAGTGG > NC_002947/545868‑546165 | cgcAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGtt > 2:1483409/1‑150 (MQ=255) gcAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTg < 1:3456371/150‑1 (MQ=255) gcAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTg > 2:359708/1‑150 (MQ=255) aaGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGcc > 1:2246752/1‑150 (MQ=255) aGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCCCTCCCCGCCCGATCATCGGCAACATTTCATGTCGCCg < 1:4501101/150‑1 (MQ=37) aGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCCCTCCCCGCCCGATCATCGGCAACATTTCATGTCGCCg < 2:3120/150‑1 (MQ=37) aGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCCCTCCCCGCCCGATCATCGGCAACATTTCATGTCGCCg < 2:2062057/150‑1 (MQ=37) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGCAATGATGCCga > 1:3095124/1‑150 (MQ=255) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCga < 1:4457415/150‑1 (MQ=255) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCga < 1:2248989/150‑1 (MQ=255) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCga < 1:1783712/150‑1 (MQ=255) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCAACATTTCATGTCGCCga < 1:1170295/150‑1 (MQ=255) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCAACATTTCATGTCGCCga < 1:2146461/150‑1 (MQ=255) tCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCgatga < 2:1130431/150‑1 (MQ=255) ccGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATcg > 2:1914278/1‑150 (MQ=255) tGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATcgggc < 1:730302/150‑1 (MQ=255) aTGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATcgggcgg < 2:2338544/150‑1 (MQ=255) ccGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGa > 1:173381/1‑150 (MQ=255) aCAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAggg > 1:51461/1‑150 (MQ=255) aaCCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCg > 1:1393585/1‑150 (MQ=255) aaCCGCTGAGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACTGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCTAAATTAAATGTTGCCGATGATCGGGCGGGGAGGGCCg < 2:199715/150‑1 (MQ=255) ccGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCggg < 2:3228043/150‑1 (MQ=255) cGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCgggg > 2:1218086/1‑150 (MQ=255) gCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTc > 1:1262706/1‑150 (MQ=255) tgtAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTc > 2:3689291/1‑150 (MQ=255) tgtAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTc > 2:1595249/1‑150 (MQ=255) tAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCtt < 2:3535644/150‑1 (MQ=255) aGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGa > 1:645698/1‑150 (MQ=255) cgcCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATAATCGGCGACATGAAATGTTGCCTATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACt < 2:1647171/150‑1 (MQ=255) gcCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGAAATTAATTACAGGGCAAGGCCCCAGCAAGCCACGGGCGATCATCGGCGACAAGAAATGTTGCAGATGTTCGGGCGGGGAGGGCCGGGGCCTCGTCATGACTg > 1:1830887/1‑150 (MQ=255) ccAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTgg < 2:1617819/150‑1 (MQ=255) ccAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTgg < 2:4082801/150‑1 (MQ=255) cgTGATGTGGAAGCTGCACTGACCGAAGCGCTTAATTCCAGCGTTAATTAAGTCCCGGGCAAGGCCCCGGCAAGCCCCGGGCTATCATCGGCGACATGAAATGTGGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGt < 1:1981450/149‑1 (MQ=255) aGTGATGTGGAAGCTGCACTGACCGAAGCGCTTAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGt < 1:2794963/150‑1 (MQ=255) tGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGc > 2:1948530/1‑150 (MQ=255) gAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGTTAATTAAGTACAGGGCAAGGCCCCGGCACGCCTCGGGCGATCATCGGCGACATGAAATGTGGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCa < 1:1202754/150‑1 (MQ=255) gAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCa > 2:2121407/1‑150 (MQ=255) acgTGGAAGCTGCACTGACCGAAGCGCTGAATGCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCaa < 2:867248/148‑1 (MQ=255) gtgtAAGCTCCACTGCCCTACGCGCTTAATCCCAGCGTTATTTATGTACAGGGAATGGCCCCGCAACGCCTGGGGCTATCATCGGCCACATGAAATGTTGCGTTTGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGa < 1:1886844/150‑1 (MQ=255) naaGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATcc > 1:3190686/2‑150 (MQ=255) aaGCTGCACTGACCGACGCGCTGAATTCCAGCGTTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGAAATGAAAGGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCct < 2:6648/150‑1 (MQ=255) tGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCttt > 1:1529322/1‑150 (MQ=255) gCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTa < 1:1025645/150‑1 (MQ=255) gCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTa < 1:4134546/150‑1 (MQ=255) aCTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGa > 2:757878/1‑150 (MQ=255) tGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACt < 2:3947958/150‑1 (MQ=255) aCCGAAGCGCTTAATTCCAGCGGTAATTAAGTACTGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACttt < 1:2382506/150‑1 (MQ=255) ccGACGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACtttt < 1:4217322/150‑1 (MQ=255) gcTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCt > 2:3342345/1‑150 (MQ=255) cttaaTTCCAGCGGTAATTAAGTACAGGGCACGGCCCCGGCAAGCCTCGGGCGATCTTCGGCGACTTGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCtt < 1:1321262/147‑1 (MQ=255) aaTTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTaaa < 2:434662/150‑1 (MQ=255) ttCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAAtt > 2:1305321/1‑150 (MQ=255) tCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAAttt < 2:81632/150‑1 (MQ=255) cGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGa < 2:1092358/150‑1 (MQ=255) cGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGa < 2:2557332/150‑1 (MQ=255) cGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGa < 2:677545/150‑1 (MQ=255) ggTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAg > 2:1849478/1‑150 (MQ=255) ttAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTcc > 1:3350983/1‑150 (MQ=255) ttAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTcc > 2:3004680/1‑150 (MQ=255) aaGTACAGGGCACGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGt < 1:1311265/150‑1 (MQ=255) aaGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGt < 1:1381339/150‑1 (MQ=255) aGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGtc < 2:1393585/150‑1 (MQ=255) tACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGtctc < 2:4127366/150‑1 (MQ=255) cAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGc < 2:1800769/150‑1 (MQ=255) gggCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCa > 2:3279188/1‑150 (MQ=255) ggCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCaa > 1:2099572/1‑150 (MQ=255) gCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGTCTGGGTGCAATATGCTCTTTAGACTTTTGTTCACTTAAATTTGGTGAGGGTGCGTCTAGCCAAt > 1:2694516/1‑150 (MQ=255) gCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTg > 2:593934/1‑150 (MQ=255) gCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTg < 1:2462838/150‑1 (MQ=255) ccccGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTgg < 1:1660116/150‑1 (MQ=255) cccGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGc > 1:3888041/1‑150 (MQ=255) ggCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCttt < 1:3336168/150‑1 (MQ=255) aaGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCtt < 2:3147406/150‑1 (MQ=255) gCCTCGGGCGATCATCGGCGACATGAACTGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGc < 1:3403786/150‑1 (MQ=255) gCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGc < 2:645759/150‑1 (MQ=255) ccTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCa < 1:21969/150‑1 (MQ=255) ccTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCa < 1:89498/150‑1 (MQ=255) cTCGGGCGATCATCGGCGACATGAAATGTGGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCaa < 2:2675101/150‑1 (MQ=255) tCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAg > 1:4119539/1‑150 (MQ=255) tCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCGTGACTGGGTGCAAGATCCTCGTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCCAGTTTTGGCTTTCTTGCAAg > 2:3915617/1‑150 (MQ=255) ggCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGGGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACa > 1:601494/1‑150 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATa < 2:2253183/150‑1 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATa < 1:1561801/150‑1 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATa < 1:3024248/150‑1 (MQ=255) gATCATCGGCAACATTTCATGTCGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATa > 1:4145282/1‑150 (MQ=39) atcGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGt > 2:3399564/1‑150 (MQ=255) tcGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTc < 1:146807/150‑1 (MQ=255) tcGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTc > 2:1494722/1‑150 (MQ=255) acGGCGACACGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGACTTGACTGGGTGCAAGATCCTCTTTAGACTTTTTTACCCTTAAATTTGGAGAGGCTCCGTCTCTCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTc < 1:986885/149‑1 (MQ=255) ggCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGc < 2:173381/150‑1 (MQ=255) gCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCa > 2:239484/1‑150 (MQ=255) cGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCaa < 1:4022144/150‑1 (MQ=255) tGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACaa < 1:2298322/150‑1 (MQ=255) gAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAAt > 2:2830056/1‑150 (MQ=255) aaTGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAATCa < 2:2246752/150‑1 (MQ=255) tGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAATCAGt < 2:3561632/150‑1 (MQ=255) tGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAATCAGt < 1:3530319/150‑1 (MQ=255) tGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGATCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAATCAGt < 1:3454064/150‑1 (MQ=255) gTTGCCGATGATCGGGCGGGGTGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTGGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAATCAGTg < 2:16082/150‑1 (MQ=255) gTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAATCAGTg < 2:1686698/150‑1 (MQ=255) | CGCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAATCAGTGG > NC_002947/545868‑546165 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |