| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 654,406 | T→G | 6.9% | K114Q (AAG→CAG) | ctpL ← | methyl‑accepting chemotaxis protein CtpL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 654,406 | 0 | T | G | 6.9% | 727.5 / 33.7 | 218 | K114Q (AAG→CAG) | ctpL | methyl‑accepting chemotaxis protein CtpL |
| Reads supporting (aligned to +/- strand): ref base T (116/87); new base G (9/6); total (125/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01 | |||||||||||
Only 100 of 221 total aligned reads displayed.
CAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGTC > NC_002947/654257‑654553 | cAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGGAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCtt < 1:426939/150‑1 (MQ=255) aGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTg < 1:248423/150‑1 (MQ=255) tGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCcg < 2:1906098/150‑1 (MQ=255) gCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCcgg > 2:1401423/1‑150 (MQ=255) cAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCTCTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCcggc < 1:4079327/150‑1 (MQ=255) cAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCAAGCTGGCcggc < 1:2323390/150‑1 (MQ=255) aGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCcggcg < 2:2517963/150‑1 (MQ=255) gggTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGCCGCCGGCAAGCTGGCcggcga < 1:529241/150‑2 (MQ=255) ggTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGCCGCCGGCAAGCTGGCcggcgac < 2:3060605/150‑3 (MQ=255) cGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCcagca < 2:3071955/150‑1 (MQ=255) gCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGt > 2:2947733/1‑150 (MQ=255) gCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGt > 1:118640/1‑150 (MQ=255) gCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTGGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGt > 1:2958260/1‑150 (MQ=255) cAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGtt < 2:4440949/150‑1 (MQ=255) cAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGtt > 2:156823/1‑150 (MQ=255) gggCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGc > 1:4133061/1‑150 (MQ=255) ggCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCg < 2:2936704/150‑1 (MQ=255) gcagcaAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCgg > 1:3647416/1‑150 (MQ=255) gcagcaAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCgg > 1:2230745/1‑150 (MQ=255) aaGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAg > 2:1582559/1‑150 (MQ=255) aGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAgg < 2:1413426/150‑1 (MQ=255) gttgCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCGGGCCATCTGCTCGAAGTTCGCCCCGAGCTCCCGCTCGGCTTGCAGCAGCTGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGGGGCCAGCCGTTCGTTGGCGGTGAAGGc < 1:2277392/147‑1 (MQ=255) tAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGcc > 2:1441099/1‑150 (MQ=255) cGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGc < 1:916697/150‑1 (MQ=255) gATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCa < 2:1012273/150‑1 (MQ=255) tGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGc < 2:3768713/150‑1 (MQ=255) gCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTa < 2:4164492/150‑1 (MQ=255) gCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTa > 1:1024283/1‑150 (MQ=255) cTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATc > 1:1755230/1‑150 (MQ=255) tCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATcc > 1:3494237/1‑150 (MQ=255) tCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATcc > 2:256265/1‑150 (MQ=255) tGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTgg < 1:2063416/150‑1 (MQ=255) gCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTggg < 1:2411971/150‑1 (MQ=255) gCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTggg > 1:2721426/1‑150 (MQ=255) gCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTggg < 2:2274628/150‑1 (MQ=255) gCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTggg < 1:1631316/150‑1 (MQ=255) ccACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTgggg < 1:4205300/150‑1 (MQ=255) ccACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTgggg < 2:3298549/150‑1 (MQ=255) cACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTGCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgc > 2:40723/1‑150 (MQ=255) cACTGTCGCGGGCGTAGCTGGCCAGCTGCTCGAAGTTCGCCCCCAGCACCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgc > 1:3037532/1‑150 (MQ=255) cgGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTtc > 2:2799848/1‑150 (MQ=255) gggCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTtct > 2:3102379/1‑150 (MQ=255) gggCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTtct > 2:3305833/1‑150 (MQ=255) ggCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTtctc < 1:1958555/150‑1 (MQ=255) gCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCg > 2:819142/1‑150 (MQ=255) gCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCg < 1:2066451/150‑1 (MQ=255) gCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCg < 2:3958847/150‑1 (MQ=255) gCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCg > 1:3548199/1‑150 (MQ=255) gCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCg < 1:3192505/150‑1 (MQ=255) tGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGct > 2:3414341/1‑150 (MQ=255) tGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGct > 2:6822/1‑150 (MQ=255) ccATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTa > 2:4439286/1‑150 (MQ=255) tCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCg > 2:3095541/1‑150 (MQ=255) tCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCg > 2:4284233/1‑150 (MQ=255) cTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCgg > 1:2631518/1‑150 (MQ=255) tGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGc < 2:3828327/150‑1 (MQ=255) cGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGt > 2:3002429/1‑150 (MQ=255) gAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTc > 2:2055562/1‑150 (MQ=255) gAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTc > 1:712300/1‑150 (MQ=255) gtgcGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGt < 1:4513654/147‑1 (MQ=255) gCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGt < 2:1844140/150‑1 (MQ=255) gCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCGATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTCCCGGCCAGTCCGTCAGt < 1:3875792/150‑1 (MQ=255) cccccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTg > 2:1115227/1‑150 (MQ=255) cccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCg > 2:3507942/1‑150 (MQ=255) ccAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCgg > 1:1409036/1‑150 (MQ=255) tCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGc > 1:1284574/1‑150 (MQ=255) cccGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCa > 1:3069105/1‑150 (MQ=255) gCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACt < 1:3175312/150‑1 (MQ=255) gCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACt < 2:1786936/150‑1 (MQ=255) tCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGt > 1:3814373/1‑150 (MQ=255) tCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGt < 1:2819264/150‑1 (MQ=255) ttGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGtt > 1:18309/1‑150 (MQ=255) ttGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACAGTTGGtt > 1:4025980/1‑150 (MQ=255) gcagcagcaGGGCTTGTGGGGCGCCGGCCAGCTTGTCGGCGGCCAGCAGTTCGGTGGCGGTGAAGGCCTGCAGGCTATCCAGGCGGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGGTGGTTCg > 2:1315382/1‑150 (MQ=255) agcagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGcc < 2:3569543/150‑1 (MQ=255) gcagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCt < 1:1461492/150‑1 (MQ=255) cagcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTc > 2:2590743/1‑150 (MQ=255) gcagGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCa > 1:2615365/1‑150 (MQ=255) agGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATg > 1:3367138/1‑150 (MQ=255) tgtgGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggcggcg < 2:4465413/150‑1 (MQ=255) tgctggccGCCGGCAAGCTGGCCGGCGACCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggcggcg > 1:3242025/8‑150 (MQ=255) tgGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggcggcggc > 2:2117537/1‑150 (MQ=255) tggccGCCGGCAAGCTGGCCGGCGACCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGcc > 1:2130788/5‑150 (MQ=255) ggccGCCGGCAAGCTGGCCGGCGACCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCt > 1:3251612/4‑150 (MQ=255) ggccGCCGGCAAGCTGGCCGGCGACCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCt > 2:2305227/4‑150 (MQ=255) ggTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCt > 1:3506822/1‑150 (MQ=255) tCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTgg > 1:2855474/1‑150 (MQ=255) tCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTgg < 2:1700183/150‑1 (MQ=255) tCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTgg > 2:3854184/1‑150 (MQ=255) cGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGgc < 1:4361220/150‑1 (MQ=255) cGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCa < 1:1058896/150‑1 (MQ=255) cGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCa < 1:2394338/150‑1 (MQ=255) ggCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAg > 1:4081644/1‑150 (MQ=255) gCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAgg < 1:841043/150‑1 (MQ=255) cAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGc > 2:2398505/1‑150 (MQ=255) tgCTGGCCGCCGGCAAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCg > 2:1631634/2‑150 (MQ=255) gCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGt > 2:3672211/1‑150 (MQ=255) gCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGt > 1:203430/1‑150 (MQ=255) gCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGt > 1:1360526/1‑150 (MQ=255) cTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGTc > 2:723357/1‑150 (MQ=255) | CAGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGTC > NC_002947/654257‑654553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |