| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 668,074 | T→G | 17.9% | intergenic (+35/+117) | yfhM → / ← PP_0571 | lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 668,074 | 0 | T | G | 17.9% | 376.6 / 19.2 | 165 | intergenic (+35/+117) | yfhM/PP_0571 | lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (47/83); new base G (31/2); total (80/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.63e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 172 total aligned reads displayed.
GCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCC > NC_002947/667926‑668223 | gCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTT < 1:1172827‑M1/150‑1 (MQ=255)gCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTT < 2:3897472‑M1/150‑1 (MQ=255)gCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTT < 1:192848‑M1/150‑1 (MQ=255) aGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGC < 2:3628887‑M1/150‑1 (MQ=255) aGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGC < 2:2005105‑M1/150‑1 (MQ=255) gTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCATGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCG > 2:4443977‑M1/1‑150 (MQ=255) tGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAGGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGg > 1:67485‑M1/1‑149 (MQ=255) tGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGT < 1:1142128‑M1/150‑1 (MQ=255) tGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGT > 2:1690073‑M1/1‑150 (MQ=255) ccccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGC < 2:2122333‑M1/150‑1 (MQ=255) cccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCG > 2:3723885‑M1/1‑150 (MQ=255) cGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAt < 2:35874/150‑1 (MQ=255) aCCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAggg > 1:4147644/1‑149 (MQ=255) tACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGATGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGc > 2:1664846/1‑150 (MQ=255) cgcgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCGCacc > 2:4035969/1‑148 (MQ=255) gcgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAg < 1:844389/150‑1 (MQ=255) gTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGTTAGGGCCGCACAGCg > 1:4490063/1‑150 (MQ=255) tGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCgg > 2:2065116/1‑150 (MQ=255) gccgccgccGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑c < 2:3671058/150‑1 (MQ=255) gccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCaaa < 2:414315/139‑1 (MQ=255) gccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGG‑ccctatc < 2:3437984/150‑5 (MQ=255) gcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCCCAAAGCCG‑CCCCCACaaa > 2:15766/1‑149 (MQ=255) cAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGGGCGGCGCGGTAGGGCCGCCAAGCGG‑GCCCGCCaaat > 1:286812/1‑148 (MQ=255) cAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGGGCGGGGCGGAAGGGGCGCAAAGCGG‑CCCCGACaaaa > 1:286816/1‑148 (MQ=255) aGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTT < 2:522890‑M1/113‑1 (MQ=255) aGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTT > 1:522890‑M1/1‑113 (MQ=255) gTCGAATCTTGGTACCGGCCGAACTTGCTGGGGGTGGGCTTTGGGAATGGGTAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTAGGGGTAAAGTGTGGGAGCGGCCTTGCGTGGCTTTTGGGCCGCAAAGGGG‑CCCCGACAATTCaa < 1:3484442/150‑1 (MQ=255) tCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAg > 2:4468035/1‑150 (MQ=255) cGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGGGGGGGCCGCCACGCGG‑CCCCGCCCAGTCAAgc > 1:3377350/1‑150 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCGCAAAGCGG‑CCCCGACAAGTCCAgcgg > 2:3953542/1‑150 (MQ=255) aTCGTTGTACCGGCCGAACCTGCTGGCGGTGGGCGTTGGGCTTGGGGAGATGAGGGTTAAAGCCCGATAGAGACCCGATCTACGGGTAATGTGTGGGAGCGGCCTTGCGTCGCTATAGGGCCGAAAAGCGG‑CCCCGACAATTCAAgcggc < 1:1282075/150‑1 (MQ=25) aTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAgcggc < 2:4233985/150‑1 (MQ=255) aTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGCTAGGGCCGCCAAGCGG‑CCCCCCCACTTCAAgcggc > 1:3338359/1‑150 (MQ=255) cGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGa < 2:332792/150‑1 (MQ=255) gATGTACGGGCCTAACCTGCTGGCGGTGGGCGTTGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGGGGCCTTGCGTCGCTATAGGGCCGCAACGCGG‑CCCCGACAATTCAAGCGGCGaa < 1:3853847/150‑1 (MQ=255) gATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGaa < 2:2790439/150‑1 (MQ=255) aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAg > 2:2639768/1‑150 (MQ=255) aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGGGGGGCCCGGTAGGGGCCCCACGGGG‑GGCCGACAAGTCGAgcggcccac > 1:4224297/1‑146 (MQ=255) tGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgct < 1:3729696‑M1/150‑41 (MQ=255) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGCGCGATAGGGCCGCAAAGCGG‑CCCCCACCAGTCAAGCGGCGAAGCTGaa > 1:3747798/1‑150 (MQ=39) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGGGCGTCGCGGTTGGGCCGCCACGCGG‑CCCCGACAATTGAAGCGGCGACGCGGaa > 1:2546690/1‑150 (MQ=255) cGGCCTAACCGGCTGGCCGTGGGCGTTGGGCATGGGGATATGAGGGTTAAAGCCCGCTAGAGACCCGCTCTAGGGGGAACGTGTGGGTGCGGCCTTGCGTCGCGATTGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGaaa < 1:3906789/150‑1 (MQ=25) cGGCCGAACCTGCAGGCCGTGGGCGATGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCTATAGGGCCGAAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGaaa < 2:381854/150‑1 (MQ=255) gCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGGGCGGTAGGGCCGCAAAGCGG‑CCCCCCCAAATCAACCGGCGAAGCAGAAAGc > 1:2329152/1‑150 (MQ=255) cGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCt < 1:1752494/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGGGGGCTGGGGCCGCCCAGCGG‑GCCCCCCAAATGCAGCGGCGAAGGGGGAAGccgg > 1:3067923/1‑148 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGGGCGGGGCGCTAGGGCCGCCAAGCGG‑CGCCGCCCAATCAAGCGGCCCAGCGGGAAGccgg > 1:1456918/1‑148 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTGGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:1991216/150‑1 (MQ=255) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:2500319/150‑1 (MQ=255) cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTggggg > 2:2761655/1‑149 (MQ=255) cAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctg < 2:1802241/150‑1 (MQ=255) aGGCCGTGGGTGATGGGCAAGGGGAGATTACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGAGTGGGAGCGGCCTTGAGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTCGGgcagag > 2:3727420/1‑146 (MQ=38) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 2:3200969/150‑1 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct > 1:754883/1‑150 (MQ=255) ggCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGctgctg < 2:4280532/150‑1 (MQ=255) cGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGGTAGGGCCCCAAAGCCG‑CCCCCACAAATCAAGCGGCGCAGCGGAAAGCCGGGGGCTGCTGTGc > 2:2288292/1‑150 (MQ=255) gTGGGCGATGGTCAAGGGGATATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCTGAAAGTTTGGGAGCGTCATTGATTCGCGATAGGGCCTCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGACTGGGGCTGCTGTGCa < 2:1912218/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:2861293/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGGGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:839588/150‑1 (MQ=255) gggCGTTGGGAATGGGGAGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGGGTAATGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGAAACGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGc < 1:523813/150‑1 (MQ=37) gggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGc < 2:3953850/150‑1 (MQ=255) ggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc < 2:2609572/150‑1 (MQ=255) ggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc < 2:754883/150‑1 (MQ=255) aTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGt > 2:128033‑M2/1‑149 (MQ=255) tGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatc < 1:1846408‑M1/150‑72 (MQ=255) tGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtc > 2:1412839‑M2/1‑148 (MQ=255) gggCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcg < 1:3332763‑M1/150‑73 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCCACAATTCAATCGGGGCACCGGAAAGCCAGGGGCTGCTGTGCAGCCCTGtcgcgac < 2:2858110‑M2/150‑8 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgac < 1:1631946‑M1/150‑77 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgac < 2:2999241‑M2/150‑8 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCAGGGGCTGCGGTGCAGCCCAGtcgcgtc < 2:2200852‑M2/150‑8 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgac < 2:3343301‑M2/150‑8 (MQ=255) ggAGATGACGGTTAAAGCCCGCTCGAGACCCGCTCTACGCGGAACGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaa > 1:1939108‑M2/1‑139 (MQ=255) agaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 2:366592‑M2/1‑137 (MQ=255) tGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCGG‑CCCCCAAAATTCAAGCCGCGGAGCGGAAAGCCGGGGGCTGCGGTGCCGCCCAGgcgcgacgccaggcccctcccc < 2:121742‑M2/150‑23 (MQ=255) aaaGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGCGCGGTCGGGCCGCCACGCGG‑CCCCCCCCAAGCCAGCGGCGAACCTGAAAGCCGGGGGCTGCGGGGCCGCCCTGTCGCGAGGCCAGGCCGCGCCcacc > 1:2134723/1‑149 (MQ=255) aGCCCGCTAGTTCCCCGCTGTAGGGGTAATGTTTGGGTGGGGCGTTGGGTCGCTTTTGGGCCCAAACGGGG‑CCCCGAAATTTCACGCGGCTAAGCTGAAAGCCTGGGGCTGATTTGCTGCCCTGTCGCGAGGCAAGGCCGCTCCCACaaa < 2:642933/150‑1 (MQ=255) aGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAAATCAAGCGGCGAAGCGGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCACCCACaaa > 2:2154549/1‑150 (MQ=255) aCCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAAATCAACCGGCGAAGCTGAAAGCCAGGGGCTGCTGTGCAGCCCAGTCGCGACGCAACGCCGCTCCCCCAAAGACCGCGCCGaa > 2:3433234/1‑149 (MQ=25) cGCTCTACGCGGACTGTGTGGGAGCGGCTTTGCTTCGCTATCGGGCCGAACGGCGG‑CCCCGACACTACACGGGGCTACGCTTAAAGCGGGGGGCTGCTGTGCAGCCCTGGCGCGACGAACGGCCGCTCCCACAAAGACCGCGCAGATCAg < 2:2861997/150‑1 (MQ=255) gCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGGTAGGGCCGCAAAGCGG‑CCCCGGCAAATCAATCGGCGAAGCGGTAAGCCGGGGGCTGCGGTTCCGCCCGGTCGCCACGCAAGGCCGCACCCACAAAAAACGCCCacaagagt > 2:897886/1‑143 (MQ=19) tctACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCGG‑CCCCCCCCAATCAAGCGGCGCACCGGAAAGCCGGGGGCTGCGGTGCAGCCCAGTCGCGACCCAAGGCCGCGCCCACCAAGACCCCCCACATCAgggg > 2:2100047/1‑150 (MQ=255) gcgGAAAGTGTGGGAGCGGCCTTTCGTCGCGGTATGGCCCCCAAGCGG‑CCCCCACAAATCAAGCGGCGGAGCGGAAAGCCGGGGGGGGCGGTGCCGCCCGGGCGCCGCGCAAGGCCCCTCCCCCAAAGACCCCCCCGAACAGTgggtaac > 2:461388/1‑145 (MQ=255) cgGAATGTGTGGGCGGGGCCTGGCGTCGCGATCGGGCCGCACCGCGG‑CCCCGACAATCCACGCGGCGACGCGGAAAGCCTGGGGCTGCTGTGCCGCCCTGTCGCGCCGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCAcc < 2:1456918/150‑1 (MQ=37) tactgtggGGGCGGGGCCTTGCGTGGCTATCGGGCCGCAAAGCGG‑CCCCGAAAATTCAAGCGGCTAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCa < 2:1083183/146‑1 (MQ=25) tctttgtgggagCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcga < 2:1271088‑M2/99‑7 (MQ=255) ggggaGGGGCCTGGCGTCGCGCctgggcggcaccgcagcccccggctttccgctccgcggcttgaattttgggggccgctttgcggccctagcgcgacgcacggccgctcccacactttccgcgtagagcgggtctctagcgggctttca < 2:121742‑M1/149‑129 (MQ=255) ggCCTGGCGTCGCGATTGGGCCGAAACGCGG‑CCCCGACAATTCACGGGGCGACGCTGAACGCCGGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCcaca < 2:3377350/150‑1 (MQ=38) gCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 2:2457464/1‑150 (MQ=255) gCCTTGCGGCGCGATGGGGCCTAAACGCGC‑CCCCGCAAATACACGCGGCGAAGCTCAACGCCTGGGGCTGCTGTGCCGCCCGGTCGCGAGGAATGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg < 2:2315795/150‑1 (MQ=255) gCCTGGGGTCGCTATGGGCCCCCAACGCGC‑CCCCCACAATTCACGGGGCTACGCTTAAAGCGTGGGGCTGCTGTGCCGCCCGGTCGCGACTAAGGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg < 2:61077/150‑1 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc > 2:2972252/1‑150 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc > 2:2637212/1‑150 (MQ=255) ccTAGCGTCGCGAcagggctgcacagcagccccaggctttcagcatcgccgcttgaattgtcggggccgctatgccgccctaacgcgacgcaaggccgctcccacactttccgcgtagagcgcgtcactaccgggctttcaccgtcatct > 2:366768‑M1/1‑13 (MQ=255) ttGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctcc > 2:3539137‑M1/1‑11 (MQ=255) ttGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgcgtttgggcccgaaagcgacgcaaggccgcgcccccactttccccgtagagcggggctctagcgggcgttaaccggcaactcc > 1:1495633‑M1/1‑11 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 2:4245825/1‑150 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 2:4163492/1‑150 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 2:4099979/1‑150 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 2:4099459/1‑150 (MQ=255) | GCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCC > NC_002947/667926‑668223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |