| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 668,096 | A→C | 13.9% | intergenic (+57/+95) | yfhM → / ← PP_0571 | lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 668,096 | 0 | A | C | 13.9% | 404.8 / 9.8 | 166 | intergenic (+57/+95) | yfhM/PP_0571 | lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (86/49); new base C (7/18); total (96/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.57e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 170 total aligned reads displayed.
GCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCC > NC_002947/667948‑668244 | gcgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAg < 1:844389/150‑1 (MQ=255) gTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGTTAGGGCCGCACAGCg > 1:4490063/1‑150 (MQ=255) tGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCgg > 2:2065116/1‑150 (MQ=255) ccgccgccgCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑cc < 2:3913400/150‑1 (MQ=255) gccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCaaa > 1:414315/1‑139 (MQ=255) gccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCaaa < 2:414315/139‑1 (MQ=255) ccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGTGGCGCTAGGGCCGCCAATCGG‑ccccccca > 1:1766181/1‑146 (MQ=255) gcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGTGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAAt > 1:2680262/1‑150 (MQ=255) gcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTTCGGCGCGATAGGGCCCCAAAGCGG‑CCCCCACaaa > 2:15912/1‑149 (MQ=255) cAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGGGCGGCGCGGTAGGGCCGCCAAGCGG‑GCCCGCCaaat > 1:286812/1‑148 (MQ=255) cAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGGGCGCTAGGGCCGCCAAGCGG‑CCCCGAccaaa > 1:286728/1‑146 (MQ=255) gTCGAATCTTGGTACCGGCCGAACTTGCTGGGGGTGGGCTTTGGGAATGGGTAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTAGGGGTAAAGTGTGGGAGCGGCCTTGCGTGGCTTTTGGGCCGCAAAGGGG‑CCCCGACAATTCaa < 1:3484442/150‑1 (MQ=255) gTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCaa < 1:3005459/150‑1 (MQ=255) tCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAg > 2:4468035/1‑150 (MQ=255) cGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAAATCAAgc > 1:3377332/1‑150 (MQ=255) cGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAAATAAAgc > 2:2223705/1‑150 (MQ=255) gATGTACGGGCCTAACCTGCTGGCGGTGGGCGTTGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGGGGCCTTGCGTCGCTATAGGGCCGCAACGCGG‑CCCCGACAATTCAAGCGGCGaa < 1:3853847/150‑1 (MQ=255) aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAg < 2:2669877/150‑1 (MQ=255) aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAg > 2:2639768/1‑150 (MQ=255) cgggCCGCACCTGCTGGCGGTGGGCGATGGGCATGGGGAGTTGACGGTGAACGCCCGCTTGAGCCCCGCTCTAGGGGTAATGTGTGGGTGCGGCGTTGCGTCGCGATTGGGCCGAAACGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGaa < 1:3815249/148‑1 (MQ=255) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGCGCGATAGGGCCGCAAAGCGG‑CCCCCACCAGTCAAGCGGCGAAGCTGaa > 1:3747798/1‑150 (MQ=39) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGGGCGTCGCGGTTGGGCCGCCACGCGG‑CCCCGACAATTGAAGCGGCGACGCGGaa > 1:2546690/1‑150 (MQ=255) gCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGGGCGGTAGGGCCGCAAAGCGG‑CCCCCCCAAATCAACCGGCGAAGCAGAAAGc > 1:2329152/1‑150 (MQ=255) cGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCt < 1:1752494/150‑1 (MQ=255) gacccTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:3759867/147‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg > 2:286036/1‑150 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTGGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:1991216/150‑1 (MQ=255) acccTGCTGGCGGTGGGCGTTGGGCATGGGGAGATGCGGGTGAACGCCCGCTAGCGACCCGCTCTCCGGGGAATGGGTGGGCGGGGCCTGGCGTCGCGTTCGGGCCGCAACGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 1:2011663/148‑1 (MQ=255) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:2500319/150‑1 (MQ=255) aCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCCAAGCGG‑CCCCGACCATTAAAGCGGCGAAGCTGAAAGCCgggg > 2:210075/1‑150 (MQ=255) cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTggggg > 2:2761655/1‑149 (MQ=255) cAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctg < 2:1802241/150‑1 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct > 1:754883/1‑150 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 2:4269284/150‑1 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 2:3200969/150‑1 (MQ=255) ggCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGctgctg < 2:4280532/150‑1 (MQ=255) cGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGGTAGGGCCCCAAAGCCG‑CCCCCACAAATCAAGCGGCGCAGCGGAAAGCCGGGGGCTGCTGTGc > 2:2288292/1‑150 (MQ=255) gTGGGCTCTGGTCATGGGGAGAGGTGGGTGACCGCCCGCTGGAGAACGGCTGGCCGCGGAAATTGTGGTTGCGGCCTTGGTACGCGATAGGGCCGCAAGGCGG‑GCCCGACATTTCAAGCTGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 2:2099809/150‑1 (MQ=255) gTGGGCGATGGTCAAGGGGATATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCTGAAAGTTTGGGAGCGTCATTGATTCGCGATAGGGCCTCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGACTGGGGCTGCTGTGCa < 2:1912218/150‑1 (MQ=255) gggCGTTGGGAATGGGGAGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGGGTAATGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGAAACGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGc < 1:523813/150‑1 (MQ=37) gggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGc < 2:3953850/150‑1 (MQ=255) gggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGc < 2:4043823/150‑1 (MQ=255) ggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc < 2:754883/150‑1 (MQ=255) tGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtc > 2:1412839‑M2/1‑148 (MQ=255) tGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTGGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtc > 2:3435005‑M2/1‑148 (MQ=255) cAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcga > 2:2184759‑M2/1‑144 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCCACAATTCAATCGGGGCACCGGAAAGCCAGGGGCTGCTGTGCAGCCCTGtcgcgac < 2:2858110‑M2/150‑8 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgac < 2:2999241‑M2/150‑8 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgac < 2:3343301‑M2/150‑8 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCCCAAAGCGG‑CCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgac < 2:4468727‑M2/150‑8 (MQ=255) gggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgca < 2:2567316‑M2/150‑11 (MQ=255) gggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCCAAAGGGCCCCAAACCCG‑CCCCCACCAATCAAGCCGCCAACCGGAAAGCCAGGGGCGGCGGTGCCCCCCAGGCGCCACGcc > 2:61050/1‑149 (MQ=255) ggAGTTGCCGGTTAACGCCCGCTAGAGCCCCGCTCTACGGGGAAAGTGGGGGCGCGGCCTTGCGTCGCTTTCGGGCCCAAACGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaa > 1:1495633‑M2/1‑139 (MQ=255) agaTGACGGTGAAAGCCCGGTAGTGACGCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGTTAGGGCGGCATAGCGG‑CCCCGACAATTCAAGCGGCGATGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgctagg > 2:366768‑M2/1‑137 (MQ=255) agaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 2:366592‑M2/1‑137 (MQ=255) tGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCCGGCCCATAGGGCCGCAAACCCG‑CCCCCCAAATTAAAGCGGCGGAGCGGAAAGCCAGGGGCTGGGGGGCCGCCCAGTCGCGACCCCCGGCCGCACCca > 2:122044/1‑150 (MQ=255) tGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCGG‑CCCCCAAAATTCAAGCCGCGGAGCGGAAAGCCGGGGGCTGCGGTGCCGCCCAGgcgcgacgccaggcccctcccc < 2:121742‑M2/150‑23 (MQ=255) aCCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAAATCAACCGGCGAAGCTGAAAGCCAGGGGCTGCTGTGCAGCCCAGTCGCGACGCAACGCCGCTCCCCCAAAGACCGCGCCGaa > 2:3433234/1‑149 (MQ=25) cGCCCTCCGCGTAATGTGTGGGAGCGGCCTTGGGGCGCGATAGGGCCGCAACGCGG‑CCCCGACAATTCACGCGGCGACGCTGAAAGCCTGGGGCGGCTGTGCAGCCCTGTCGCGCCGCACGGCCGCTCCCACAAAGACCGCGCAGATCAg < 2:2862236/150‑1 (MQ=255) gCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGGTAGGGCCGCAAAGCGG‑CCCCGGCAAATCAATCGGCGAAGCGGTAAGCCGGGGGCTGCGGTTCCGCCCGGTCGCCACGCAAGGCCGCACCCACAAAAAACGCCCacaagagt > 2:897886/1‑143 (MQ=19) tACGCGGAAAGTGTGGGAGCGGGCTTGCGGCGCGGTAGGGGCCCCAAGCCG‑CCCCGCCAAATCAAGCGGCGCATCGGCAAGCCTGGGGCGGGTGTGCAGCCCAGTCGCGACGCAAGGCCGCTCCCCCCAAGACCGCGCCGAACCGTGGAt > 2:4189728/1‑150 (MQ=255) tACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGGGGAGCCCGGTCGCGACGCAAGGCCGCTCCCACAAAGACCCCGCAGATGAGTggct > 2:127219/1‑148 (MQ=25) gcgGAAAGTGTGGGAGCGGCCTTTCGTCGCGGTATGGCCCCCAAGCGG‑CCCCCACAAATCAAGCGGCGGAGCGGAAAGCCGGGGGGGGCGGTGCCGCCCGGGCGCCGCGCAAGGCCCCTCCCCCAAAGACCCCCCCGAACAGTgggtaac > 2:461388/1‑145 (MQ=255) tactgtggGGGCGGGGCCTTGCGTGGCTATCGGGCCGCAAAGCGG‑CCCCGAAAATTCAAGCGGCTAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCa < 2:1083183/146‑1 (MQ=25) tctttgtgggagCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcga > 1:1271088‑M2/5‑97 (MQ=255) ggCCTGGCGTCGCGATTGGGCCGAAACGCGG‑CCCCGACAATTCACGGGGCGACGCTGAACGCCGGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCcaca < 2:3377350/150‑1 (MQ=38) gccgtggCGTGGCTATCGGGCCGCAACGCGG‑CCCCTACAATTCACGCGGCGAAGCTGAATGCGTGGGGGTGCTGGGCCGCCCTGTCGCGACGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCcaca < 2:735996/144‑1 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 2:2457464/1‑150 (MQ=255) gCCTGGGGTCGCTATGGGCCCCCAACGCGC‑CCCCCACAATTCACGGGGCTACGCTTAAAGCGTGGGGCTGCTGTGCCGCCCGGTCGCGACTAAGGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg < 2:61077/150‑1 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc > 2:2637212/1‑150 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc > 2:2972252/1‑150 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 2:4245825/1‑150 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 2:4099979/1‑150 (MQ=255) cGTCGCGATTGGGCCGCAACGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAg < 2:3747798/150‑1 (MQ=255) gTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGc > 1:3431844/1‑150 (MQ=255) gTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCAACACCCACAGCCCCAGc > 1:4320172/1‑150 (MQ=255) gcgATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAcc > 2:657934/1‑150 (MQ=255) gcgATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAcc > 2:148092/1‑150 (MQ=255) cgATCGGGCCGCAACGGGG‑CCCCGCCAATTCACGCGGCGAAGCTGAAAGCCTGGGGCTGCGGTGCAGCCGTGGCGCGACGAACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAcca < 2:3527255/150‑1 (MQ=255) cgATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgccc < 1:3332763‑M2/150‑79 (MQ=255) cgATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAcca > 2:4356128/1‑150 (MQ=255) gATCGGGCCCCAACGCGG‑CCCCGACAATTCACGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccag < 2:2852092/150‑1 (MQ=255) gATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgccca < 1:1846408‑M2/150‑80 (MQ=255) gATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccag > 1:3227516/1‑150 (MQ=255) tgggCCGCACCGGGG‑CCCCTACAATCCACGCGCCGAAGCTTAAAGCGTGGGGCTGGTGTGCTGCCGTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagcca < 2:67485/149‑1 (MQ=255) ggCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgcccatcgcc < 1:1315823‑M2/150‑85 (MQ=255) ggCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga > 1:154138/1‑150 (MQ=255) ggCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga > 2:3548173/1‑150 (MQ=255) ggCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga > 2:1538391/1‑150 (MQ=255) gCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgc > 2:3718447‑M2/1‑65 (MQ=255) gCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCa > 1:3338688/1‑137 (MQ=255) gCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCa < 2:3338688/137‑1 (MQ=255) gCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgat > 2:1831152/1‑150 (MQ=255) ccGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatg > 2:4043855/1‑150 (MQ=255) ccGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatg > 1:1035267/1‑150 (MQ=255) cGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGc < 1:1635202/137‑1 (MQ=255) cGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGc > 2:1635202/1‑137 (MQ=255) gCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatgat > 2:4133641/1‑150 (MQ=255) gCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatgat > 2:1364810/1‑150 (MQ=255) aaGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTcc > 1:907504/1‑150 (MQ=255) | GCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGG‑CCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCC > NC_002947/667948‑668244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |