| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 668,110 | T→A | 11.7% | intergenic (+71/+81) | yfhM → / ← PP_0571 | lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 668,110 | 0 | T | A | 11.7% | 443.5 / 12.3 | 171 | intergenic (+71/+81) | yfhM/PP_0571 | lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (72/71); new base A (21/2); total (97/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.76e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 174 total aligned reads displayed.
GCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGC > NC_002947/667961‑668259 | gcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGTGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAt > 1:2680262/1‑150 (MQ=255) cGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATAAAgc > 2:2223705/1‑150 (MQ=255) cGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGGGGGGGCCGCCACGCGGCCCCGCCCAGTCAAgc > 1:3377350/1‑150 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCGCAAAGCGGCCCCGACAAGTCCAgcgg > 2:3953542/1‑150 (MQ=255) aTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcggc < 2:4233985/150‑1 (MQ=255) aTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGCTAGGGCCGCCAAGCGGCCCCCCCACTTCAAgcggc > 1:3338359/1‑150 (MQ=255) gATGTACGGGCCTAACCTGCTGGCGGTGGGCGTTGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGGGGCCTTGCGTCGCTATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGaa < 1:3853847/150‑1 (MQ=255) aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCACGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAg < 2:1133288/150‑1 (MQ=255) aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAg < 2:2669877/150‑1 (MQ=255) aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGGGGGGCCCGGTAGGGGCCCCACGGGGGGCCGACAAGTCGAgcggcccac > 1:4224297/1‑146 (MQ=255) gTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCt < 2:664450/150‑1 (MQ=255) cgggCCGCACCTGCTGGCGGTGGGCGATGGGCATGGGGAGTTGACGGTGAACGCCCGCTTGAGCCCCGCTCTAGGGGTAATGTGTGGGTGCGGCGTTGCGTCGCGATTGGGCCGAAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGaa < 1:3815249/148‑1 (MQ=255) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGCGCGATAGGGCCGCAAAGCGGCCCCCACCAGTCAAGCGGCGAAGCTGaa > 1:3747798/1‑150 (MQ=39) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGGGCGTCGCGGTTGGGCCGCCACGCGGCCCCGACAATTGAAGCGGCGACGCGGaa > 1:2546690/1‑150 (MQ=255) gCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGGGCGGTAGGGCCGCAAAGCGGCCCCCCCAAATCAACCGGCGAAGCAGAAAGc > 1:2329152/1‑150 (MQ=255) gacccTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:3759867/147‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGGGGGCTGGGGCCGCCCAGCGGGCCCCCCAAATGCAGCGGCGAAGGGGGAAGccgg > 1:3067923/1‑148 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGccgg > 2:285788/1‑148 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg > 2:286036/1‑150 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTGGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 2:1991216/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGCCAATTCAAGCGGCGCAGCTGCAAGccgg > 2:2464607/1‑148 (MQ=39) acccTGCTGGCGGTGGGCGTTGGGCATGGGGAGATGCGGGTGAACGCCCGCTAGCGACCCGCTCTCCGGGGAATGGGTGGGCGGGGCCTGGCGTCGCGTTCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 1:2011663/148‑1 (MQ=255) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCGGTGCGTCGAGGTAGGGCCGCAAAGCGGCCCCCACAATTAAATCCGCGCAGCTGAAAGCCggg > 2:960718/1‑150 (MQ=255) cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTggggg > 2:2761655/1‑149 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 2:4269284/150‑1 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct > 1:754883/1‑150 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 2:3200969/150‑1 (MQ=255) cGTGGGCGCTGGGCAAGGGGAGATGACGGTGAACGCCCGCGAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGc < 2:4014102/150‑1 (MQ=255) gTGGGCGATGGTCAAGGGGATATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCTGAAAGTTTGGGAGCGTCATTGATTCGCGATAGGGCCTCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGACTGGGGCTGCTGTGCa < 2:1912218/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:2861293/150‑1 (MQ=255) gggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGc < 2:3953850/150‑1 (MQ=255) aTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGt > 2:128033‑M2/1‑149 (MQ=255) tGGGCACGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGGGTAAAGTGTGGGTGCGGCCTTGCGCCGCTTTCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtc > 1:510398‑M2/1‑148 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgac < 2:2999241‑M2/150‑8 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCAGGGGCTGCGGTGCAGCCCAGtcgcgtc < 2:2200852‑M2/150‑8 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCCCAAAGCGGCCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgac < 2:4468727‑M2/150‑8 (MQ=255) gggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgca < 2:2567316‑M2/150‑11 (MQ=255) ggAGTTGCCGGTTAACGCCCGCTAGAGCCCCGCTCTACGGGGAAAGTGGGGGCGCGGCCTTGCGTCGCTTTCGGGCCCAAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaa > 1:1495633‑M2/1‑139 (MQ=255) ggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaa > 2:3539137‑M2/1‑139 (MQ=255) agaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 2:366592‑M2/1‑137 (MQ=255) tGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCGGCCCCCAAAATTCAAGCCGCGGAGCGGAAAGCCGGGGGCTGCGGTGCCGCCCAGgcgcgacgccaggcccctcccc < 2:121742‑M2/150‑23 (MQ=255) aGCCCGCTAGTTCCCCGCTGTAGGGGTAATGTTTGGGTGGGGCGTTGGGTCGCTTTTGGGCCCAAACGGGGCCCCGAAATTTCACGCGGCTAAGCTGAAAGCCTGGGGCTGATTTGCTGCCCTGTCGCGAGGCAAGGCCGCTCCCACaaa < 2:642933/150‑1 (MQ=255) aGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGCGCGATAGGGGCGCCAAGCGGCCCCGACAAATCAAGCGGCGGAGCGGAAATCCTGGGGCTGCGGTGGAGCCCGGTCGCGCCGCCAGGCCGCACCCACaaa > 2:4286274/1‑150 (MQ=255) aGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGCGGCGAAGCGGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCACCCACaaa > 2:2154549/1‑150 (MQ=255) aCCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAACCGGCGAAGCTGAAAGCCAGGGGCTGCTGTGCAGCCCAGTCGCGACGCAACGCCGCTCCCCCAAAGACCGCGCCGaa > 2:3433234/1‑149 (MQ=25) cGCCCTCCGCGTAATGTGTGGGAGCGGCCTTGGGGCGCGATAGGGCCGCAACGCGGCCCCGACAATTCACGCGGCGACGCTGAAAGCCTGGGGCGGCTGTGCAGCCCTGTCGCGCCGCACGGCCGCTCCCACAAAGACCGCGCAGATCAg < 2:2862236/150‑1 (MQ=255) gCTCTACGCGGAAAGTGTGGGAGCGGCCCTTCGGCGCCATTGGGCCGCCAAACGGGCCCCCCCAATAAATCGGCCCACCGGAAAGCCAGGGGCAGCGGGGGCGCCCAGTCCCGAAGCCAGGGCCCGCCCCACAAGACCCCCCACATCAga > 2:897869/1‑149 (MQ=255) tctACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCAAAGCGGCCCCCCCCAATCAAGCGGCGCACCGGAAAGCCGGGGGCTGCGGTGCAGCCCAGTCGCGACCCAAGGCCGCGCCCACCAAGACCCCCCACATCAgggg > 2:2100047/1‑150 (MQ=255) aCGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCCCAAAGCCGCCCCGCCAAATAAAGCGGCGAAGCGGAAAGCCGGGGGCTGCTGTGCAGCCCAGTCGCCACCCAAAGCCGCGCCCACAAACAACGCGCAGATCAGTGGCTc > 2:2008962/1‑150 (MQ=255) gcgGAAAGTGTGGGAGCGGCCGTGCGTGGCGGTAGGGGCCCAAAGCGGCCCCGACAATTCAACCGGCGGAGCTGAAAGCCTGGGGCTGCTGTGCCGCCCAGTCGCGACGCCAGGCCGCGCCCACAAAGAACCCGCACATCAGTGGGTccc > 2:461483/1‑148 (MQ=255) cgGAATGTGTGGGCGGGGCCTGGCGTCGCGATCGGGCCGCACCGCGGCCCCGACAATCCACGCGGCGACGCGGAAAGCCTGGGGCTGCTGTGCCGCCCTGTCGCGCCGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCAcc < 2:1456918/150‑1 (MQ=37) tactgtggGGGCGGGGCCTTGCGTGGCTATCGGGCCGCAAAGCGGCCCCGAAAATTCAAGCGGCTAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCa < 2:1083183/146‑1 (MQ=25) tctttgtgggagCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcga > 1:1271088‑M2/5‑97 (MQ=255) tctttgtgggagCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcga < 2:1271088‑M2/99‑7 (MQ=255) tgGGAGCGGCCATGCGTCGCCATAGGGCCGCAAAGCGGCCCCCACAAATCAAACGGCGAAGCTGAAAGCCAGGGGCTGCTGTGCAGCCCAGTCGCGACCCAAGGCCGCTCCCACAAAGACCCCGCAGATAACTGGATAACCCAGCacatc > 2:1803289/1‑150 (MQ=25) ggAGCGGCCTTGCGTCGCTATCGGGCCGCAACGCGGCCCCTACAATTCACGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAc < 2:1766181/150‑1 (MQ=255) ggCCTGGCGTCGCGATTGGGCCGAAACGCGGCCCCGACAATTCACGGGGCGACGCTGAACGCCGGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCcaca < 2:3377350/150‑1 (MQ=38) gccgtggCGTGGCTATCGGGCCGCAACGCGGCCCCTACAATTCACGCGGCGAAGCTGAATGCGTGGGGGTGCTGGGCCGCCCTGTCGCGACGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCcaca < 2:735996/144‑1 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 2:2457464/1‑150 (MQ=255) gCCTTGCGGCGCGATGGGGCCTAAACGCGCCCCCGCAAATACACGCGGCGAAGCTCAACGCCTGGGGCTGCTGTGCCGCCCGGTCGCGAGGAATGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg < 2:2315795/150‑1 (MQ=255) gCCTGGGGTCGCTATGGGCCCCCAACGCGCCCCCCACAATTCACGGGGCTACGCTTAAAGCGTGGGGCTGCTGTGCCGCCCGGTCGCGACTAAGGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg < 2:61077/150‑1 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc > 2:2637298/1‑150 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc > 2:2637212/1‑150 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGc > 2:2972252/1‑150 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 2:4099979/1‑150 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 2:4163492/1‑150 (MQ=255) gCGTCGCGATAGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCa < 2:4490063/150‑1 (MQ=255) cGTCGCGATTGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAg < 2:3747798/150‑1 (MQ=255) gTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctcccctt < 1:1631946‑M2/150‑75 (MQ=255) gTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGc > 1:3431844/1‑150 (MQ=255) cgATCGGGCCGCAACGGGGCCCCGCCAATTCACGCGGCGAAGCTGAAAGCCTGGGGCTGCGGTGCAGCCGTGGCGCGACGAACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAcca < 2:3527255/150‑1 (MQ=255) cgATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAcca > 2:4356137/1‑150 (MQ=255) gATCGGGCCCCAACGCGGCCCCGACAATTCACGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccag < 2:2852092/150‑1 (MQ=255) gATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgccca < 1:1846408‑M2/150‑80 (MQ=255) gATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccag > 1:3227516/1‑150 (MQ=255) aTAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgcccat < 2:412953‑M2/150‑81 (MQ=255) ggggCCGCTTTGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagcca > 2:747472/2‑150 (MQ=255) cgggCCGCAACGCGCCCCCGCCAACTCACGCGGCGACGCTGAAAGCCTGGGGCTGCTGTGCAGCCCGGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagcca < 2:4279848/149‑1 (MQ=38) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgcccatcgcc < 1:1315823‑M2/150‑85 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga > 1:1842233/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga > 1:154138/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgc < 1:3718447‑M2/97‑33 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgc > 2:3718447‑M2/1‑65 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCa < 2:3338688/137‑1 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgat > 1:3372781/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgat > 2:1516118/1‑150 (MQ=255) ccGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatg > 1:1035267/1‑150 (MQ=255) ccGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatg > 2:4043855/1‑150 (MQ=255) cGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGc > 2:1635202/1‑137 (MQ=255) gaaacgCGGCCCCTACAATTCACGCGGCGACGCTCAACGCCTGGGGCTGCTGTGCAGCCCTGTCGCCACGAACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatgat < 2:70628/145‑1 (MQ=255) gCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatgat > 2:1364810/1‑150 (MQ=255) aacgCGGCCCCTACTATTCCCGCGGCGTAGCTGAAAGCGTGGGGCTGCTGGGCAGCGCTGCCGCGCCGCATGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTc < 1:4468035/147‑1 (MQ=255) aaGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTcc > 1:907504/1‑150 (MQ=255) aGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgcccatcgcccacggcct < 1:1690073‑M2/150‑93 (MQ=255) gCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGa > 2:3347960/1‑150 (MQ=255) gCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGa > 2:3347761/1‑150 (MQ=255) ccccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgat > 2:2227084/1‑150 (MQ=255) ccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGa > 2:373148/1‑144 (MQ=255) ccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgatga > 1:2414573/1‑150 (MQ=255) cGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgatgat > 2:583010/1‑150 (MQ=255) | GCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGC > NC_002947/667961‑668259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |