| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 867,950 | A→C | 9.6% | intergenic (+45/+132) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 867,950 | 0 | A | C | 9.6% | 453.2 / 6.3 | 194 | intergenic (+45/+132) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (80/89); new base C (8/16); total (89/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 212 total aligned reads displayed.
GACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGC > NC_002947/867801‑868099 | gacctggacGGCAAGGACGAGCACTGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCcaca < 2:235789/150‑1 (MQ=255)gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCcaca < 1:2439336/150‑1 (MQ=255)gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGAGTGCCGACCAGCGCACGGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCcaca < 1:2129367/150‑1 (MQ=255) acctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAg < 1:2188386/150‑1 (MQ=255) acctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAg < 2:4226420/150‑1 (MQ=255) cctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAgg < 2:243395/150‑1 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 1:1699867/150‑1 (MQ=255) tggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAg > 2:3157277/1‑150 (MQ=255) gacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTc > 2:2563117/1‑150 (MQ=255) ggCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTcgcg < 1:3591620/150‑1 (MQ=255) gCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCgcgc < 1:70531/150‑1 (MQ=255) gCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCgcgc < 2:3886931/150‑1 (MQ=255) aaGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACACGGGTCGcgccc > 2:2011371/1‑149 (MQ=255) aaGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCCCACGAGTCGcgccc > 1:3631338/1‑149 (MQ=255) aaGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGACGCGCCCGCTCCCACAGGAGTCGcgccg > 1:4070281/1‑150 (MQ=255) ggACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCATCGCGGGCGCGCCCGCGCCCCCAGGCGTCGCGCCGCa > 2:3082314/1‑150 (MQ=255) gAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCAccag > 2:3917613/1‑148 (MQ=255) gAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGACGCGCCGCACCTg > 2:3660638/1‑150 (MQ=255) gAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCAGGAGTCGCGCCGCAccag > 2:4339494/1‑148 (MQ=255) aGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGc < 2:1321619/150‑1 (MQ=255) aGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGc < 2:4144079/150‑1 (MQ=255) gCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCg < 2:4395311/150‑1 (MQ=255) gCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCAGCg > 2:1421880/1‑150 (MQ=255) aaGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGCAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTa < 2:1224816/150‑1 (MQ=255) ttCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAGGAGTCGCGCCGCCCCGGCGGGCCTTACCGAAc > 2:916102/1‑150 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgt < 1:1973556/150‑1 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgt < 2:592054/150‑1 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgtg < 2:3697046/150‑1 (MQ=255) aagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCATGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgtg > 1:3718070‑M1/85‑150 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg < 1:148219/150‑1 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg > 2:3614745‑M1/84‑150 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg > 1:1606995‑M1/84‑150 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCATGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg > 2:261634‑M1/84‑150 (MQ=255) gCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCCCACCCGCGGGCCTAACCGACCCGGTgggg > 1:2567893/1‑149 (MQ=255) gCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGa < 1:1643439/150‑1 (MQ=255) cactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagccagtgccggCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGa > 2:1759189‑M1/82‑150 (MQ=255) ttGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑ggg < 2:3382007/150‑1 (MQ=255) gCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCCCACCAGCGGGCATTACCGAACCTGTGGGAGC‑GGGcc > 1:3321154/1‑149 (MQ=255) gACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACACGAGTCGCCCCCCACCAGCCGGCATTAACCAAACGGTGGGGGC‑GGGCaatc > 2:1649230/1‑147 (MQ=255) aagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCATGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGc > 1:4408298‑M1/72‑150 (MQ=255) gcgcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCAGCGGGCATTAACGAACCGGTGGGAGC‑GGGCATgcccgcg < 2:473195‑M2/150‑8 (MQ=255) tctgaaacgcaaaaacgccactcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGaa > 2:3557084‑M1/65‑150 (MQ=255) aaTGCCCCGGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGGGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaaga > 1:3845661‑M2/1‑139 (MQ=255) gCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAggg < 2:771106/150‑1 (MQ=255) aacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgcCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAggg > 1:2903667‑M1/60‑150 (MQ=255) cTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCCGGAGTCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGt < 2:1376212/150‑1 (MQ=255) tGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTa < 2:691660/150‑1 (MQ=255) aGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACa < 1:1433086/150‑1 (MQ=255) aGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACa < 1:1096902/150‑1 (MQ=255) aCATCGAGATCATCTATAACGCCCGGGGCTGTTCTGTCGCCTGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGc < 1:3200286/150‑1 (MQ=38) cATCGAGATAATCTATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCt < 1:3905606/150‑1 (MQ=255) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCCCCAGCGGGCATTACCGAACCGGTGGGAGC‑GGGCATGCCCGCGCAGAGGGCGGTACAGGcgg > 2:1766751/1‑148 (MQ=255) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa > 2:2612179/1‑150 (MQ=255) gaTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCACGCCCCCCGGAGTCGCGCCGCACCGGCGGGCATTACCGACCCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCaa < 1:2294218/150‑1 (MQ=255) tcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc < 2:3735916/150‑1 (MQ=255) cccGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaa < 2:2481601/150‑1 (MQ=255) ggCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCAGGAGTCGCGCCCCCCCAGCGGGCATTACCGAACCGGTGGGCGC‑GGGCATGCCCGCGAAGGGGGCGGTGCAGGCGGCTCAAGCGCCAGGCCCAAAAAACg > 2:1367336/1‑150 (MQ=255) aTCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCGGCGGGCATTACCGAACCTGTGGGCGC‑GGGCCTGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCg > 2:4508549/1‑150 (MQ=255) aTCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCCCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCg > 2:2241700/1‑150 (MQ=255) tCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGa < 2:452436/150‑1 (MQ=255) cTGTAGCCAGTTCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAg < 2:1068691/150‑1 (MQ=255) cTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAg < 1:3708858/150‑1 (MQ=255) tGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAgg < 2:4081212/150‑1 (MQ=255) tGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCAGGTGGCCCGCCGCACCAGCGGGGATTTCCGAACCTGGGGGTGCGGGGCGTG‑CCGCGCAGGGGGGGGGGAGCGCGGGTCAACCGCCCGGCCCAAAAAAccccccccgg > 2:2036130/1‑146 (MQ=255) ttAGCCTGTGCCGGCCTCTTCGGGGGCGCGCCCGCTCCCACAGGTGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAggg < 1:336384/149‑1 (MQ=255) gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAggg < 2:1393861/150‑1 (MQ=255) cAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGGCGCCCCGCACCTGCGGGCATTACCGAACCGGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCCGGCACAAAAAACGCCCCGAGGGGCGtt < 2:3847239/150‑1 (MQ=255) tgggccgcCCTCTGCGCGGGCGCGCCCGCTCCCACCGGCGTCGCGCCGCACCTGGGGGAATAACCGAACCTGTGGGTGC‑GGGCATGCCCGCTATGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGttt > 1:1332040‑M1/9‑150 (MQ=255) tGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGttttt < 2:2421594/150‑1 (MQ=255) tGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGttttt < 2:1597403/150‑1 (MQ=255) tGCCGGCCTCGTCGCGGGCGCGCCCGCGCCCACCGGAGTCGCGCCGCACCTGCGGGCAGTACCGAACCTGGGGGAGC‑GGGCAGGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGttttt < 2:1946133/150‑1 (MQ=255) tGCCGGCCGCTTCGCGGGCGCGCCCGCTCCCACCGGAGGCGCGCCCCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGttttt < 1:598819/150‑1 (MQ=255) gCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 2:2543826/150‑2 (MQ=255) ccGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCCAAACGGGGGGAGC‑GGGCCTGCCCGCGAAGAGGGCGGTACAGGCTGATACAGCGCCAGGCACAAAAAACGCCCCCAGGGGCGGTTTTGc > 2:1770680/1‑150 (MQ=38) ccGGCCCCTTCGCGGGCGCCCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATAACCGAACCTGTGGGCGC‑GGGCAGGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGttttttg < 1:2279800/150‑3 (MQ=255) CCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCACCTGCGGGCCGTACCGAACCGGTGGGAGC‑GGGCCTGCCCGCGAAGGGGGCGGTACCCGCGGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTGTTtgcgatt < 1:2962290‑M1/150‑4 (MQ=255) CCTCTTCGCGGGCGCGCCCGCCCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt > 1:3157277‑M1/1‑150 (MQ=255) TCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCa > 2:1840650‑M1/1‑150 (MQ=255) TTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGa < 2:322732‑M1/150‑1 (MQ=255) ggGGGGGCGCCCGCTCCCCCCGGTGGGGCGCCGCACCTGCGGGCATTACCGACCCTGGGGGCGC‑GGCCTGGCCCGCGATGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCg > 1:85977‑M1/3‑150 (MQ=255) gggCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctgg < 2:2945999‑M2/150‑83 (MQ=255) gggCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctgg < 2:2741886‑M2/150‑83 (MQ=255) gcgcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagaggccggcactggcgacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtc < 1:3500663‑M2/150‑85 (MQ=255) CGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTa > 2:2911199‑M1/1‑150 (MQ=255) gcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGc > 2:1799764/1‑150 (MQ=255) ccGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCAGTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACCGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGt > 1:2318885/1‑150 (MQ=255) cGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa < 1:4484492/150‑1 (MQ=255) cGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGGGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa < 2:1135519/150‑1 (MQ=255) tCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg > 2:2883171/1‑150 (MQ=255) ccACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctc < 1:2619112‑M2/150‑97 (MQ=255) ccACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctc < 2:3589717‑M2/150‑97 (MQ=255) ccACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagagggcggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctc < 1:3072673‑M2/150‑97 (MQ=255) cacaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcg < 2:2657938‑M2/150‑98 (MQ=255) cacaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt > 2:2636244/1‑150 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagagggcggtacaggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcga < 1:4015299‑M2/150‑99 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagagggcggtacaggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcga < 1:1615821‑M2/150‑99 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTTCGTTTCAGACCGGCTTAAGCGTAGTGCTTg > 1:3081269/1‑150 (MQ=255) caGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTgg > 2:55103/1‑150 (MQ=255) aGGAGTCGCGCCGCACCTGCGGGCATTACCGATCCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGgc > 2:2212683/1‑150 (MQ=255) aGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGgc > 2:4206429/1‑150 (MQ=255) | GACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGC > NC_002947/867801‑868099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |