| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 915,131 | T→A | 5.5% | intergenic (+96/+52) | fruA → / ← PP_0796 | PTS fructose transporter subunit IIBC/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 915,131 | 0 | T | A | 5.5% | 555.2 / 15.8 | 182 | intergenic (+96/+52) | fruA/PP_0796 | PTS fructose transporter subunit IIBC/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (109/60); new base A (7/2); total (116/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.38e-01 | |||||||||||
Only 100 of 187 total aligned reads displayed.
CAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCGCCCAGTTCCCCT > NC_002947/914984‑915279 | cAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCg < 2:1316271/150‑1 (MQ=255) aagaagAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCCTCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATATGGGGATGCTTCGc > 1:1698167/1‑150 (MQ=255) agaagaGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa > 2:1993371/1‑150 (MQ=255) agaagaGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 2:560371/150‑1 (MQ=255) agaagaGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 2:4502526/150‑1 (MQ=255) agaagaGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 2:1100282/150‑1 (MQ=255) gaagaGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGATAATCTGGGGCTGCTTCGCAg > 2:4100267/1‑150 (MQ=255) gaagaGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAg > 1:292304/1‑150 (MQ=255) gaagaGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AAGCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAg > 1:722840/1‑150 (MQ=255) gagcgagcGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGccc < 1:871282/150‑1 (MQ=255) gcgagcgTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGGAAGGGCCGCCCAGCGGCCCCGGC‑AAGCAAAGTAGCGAAGCTGAAAATCTGGGGCTGCGTAGCAGCACtt > 1:4164443/1‑150 (MQ=255) gagcgTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTc < 2:3010207/150‑1 (MQ=255) gagcgGGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTAGGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCtaga < 1:406376/150‑4 (MQ=255) agcgTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTcg < 1:3699685/150‑1 (MQ=255) gcgTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTcgc < 1:3211271/150‑1 (MQ=255) gtgtGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCAGGGGCTGCTTCGCAGCCCTTTAGCGa > 1:2461205/1‑150 (MQ=255) tgtgGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AAACGAAGTTGCGAAGCTGAAAATCTGGGGCTGCGTCGCAGCCCAGTCGCGac > 1:2020837/1‑150 (MQ=38) tgGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGacac > 2:2423262/1‑150 (MQ=255) ggAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGAcaca > 1:980787/1‑150 (MQ=255) aGTTGGCCGTGGCGCGTGCTAAATGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGACAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAg < 1:3603451/150‑1 (MQ=255) aGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAg < 1:3852123/150‑1 (MQ=255) aGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAg < 1:3039221/150‑1 (MQ=255) ttGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCATTCGCGACACAAGGc > 1:4130945/1‑150 (MQ=255) ggCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCg < 2:3246105/150‑1 (MQ=255) gCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAACGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGc < 1:4426464/150‑1 (MQ=255) gTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCCAAGCGGCCCCGGC‑AAACTAATTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACACGGCCGCTcc > 1:2257663/1‑150 (MQ=255) gTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGACGCTGAAAATCGGGGGCTGCTTCGCAGCCCGGTCGCGACACAAGGCCGCTcc > 1:3679372/1‑150 (MQ=255) tGGCGCCTGCTAAAAGTGTTTGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTATGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTccc < 2:1737103/150‑1 (MQ=255) tGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTccc < 2:1736918/150‑1 (MQ=255) ccggCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGGGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGACGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACaga < 2:287995/147‑1 (MQ=255) gCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTcgcca < 1:2431625/127‑3 (MQ=255) gCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGa > 2:2431625/1‑127 (MQ=255) cTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGccc > 2:1511320/1‑150 (MQ=255) atAAAAGTGTTTGAGCAGACCTCGTTCTGTGGGGGCGGCGTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGA‑AATCTAAGTTGCTACGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGccc < 2:3514233/149‑1 (MQ=25) tAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCcg > 2:3859246/1‑150 (MQ=255) tAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCcg > 2:650954/1‑150 (MQ=255) tAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCcg > 2:823476/1‑150 (MQ=255) tAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTGTCGCGACACAAGGCCGCTCCCACAGAGCCcg > 1:3675291/1‑150 (MQ=255) aaaaGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTCAAAATCAGGCGCTGCTTCGCAGCCCTTTCGCGACACAACGCCGCTCCCACAGAGTCcgc > 2:1622347/1‑150 (MQ=37) aGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCGGCTCCCACAGAGCCCGCGtt > 2:3984824/1‑150 (MQ=255) gtgtTTGAGCCTACCTCGTTCTGTGGGTGCGGCCTTGGGTCGCTAAGGGCCCGAAACGGGGCCCCGGC‑AATCAAAGTGGCGAAGCTGAAAATCGGGGGCTGATTCGCAGCCCTTCCGCGAAACACGGCCGCTCCCACAGAGCCCGCGTTg < 2:1689819/150‑1 (MQ=255) tATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAATATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGcc > 2:223269/1‑150 (MQ=255) tATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGcc > 2:4170880/1‑150 (MQ=255) aGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTc > 2:3025524/1‑150 (MQ=255) aGCAGACCTCGTTCTGTGGGTGCGGCCTTGGGTCGCGAACGGGCCGCAACGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTc < 2:3237639/150‑1 (MQ=255) gCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCa > 1:4396850/1‑150 (MQ=255) ccTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCCCAGAGCCCGCGTTGGCCTGTCAACTGc > 2:3650124/1‑150 (MQ=255) cTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCg > 2:1077538/1‑150 (MQ=255) cTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCg > 1:1104530/1‑150 (MQ=255) cTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCGTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGGTGGCCTTTCAACTGCg > 2:1423178/1‑150 (MQ=255) ttCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCGGAAAATCTGGGGCTGCTTCGCAGCCCGTTCGCGACACCAGGCCGCTCCCACACAGCCCGCGGTGGCCTTTCAACAGCGATGc > 1:2074977/1‑150 (MQ=25) cTGTGGGTGCGGCCTTGGGCGGCCAACGGCCCGAACAGCGCCCCCGGC‑AATCTAAGTGGCGATGCTAAAAATCTGGGCCGGATTCGCACCCCTTCCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCtt < 2:2832286/150‑1 (MQ=25) ggggGCGGCCTTGTGTCGCCAACGGGCCCAAACGCGGCCCCGGA‑AATCTACGTTGCGACGCTTAAAATCTGGGGCTGCTTCGCAGCCCTTTCGTGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGc < 1:520695/150‑1 (MQ=37) ggTGCGGCCTTTGGTCGCCAACGGGCCCCAACGC‑GCCCCGGCAAATCTAAGTGGCTAAGCTTAAAATGGGGGGCTGCTCCGCCCCCATTCGGCCACACACGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGcc < 2:1122527/150‑1 (MQ=255) gTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCg > 2:1871532/1‑150 (MQ=255) gTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCg > 2:3495099/1‑150 (MQ=255) gggCGTTGGGGCGCGAACGGGCCGCAACGCGGCCCCGGC‑AATCTACGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTCCGCGACACACGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCaa < 2:1177111/149‑1 (MQ=255) ggCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAAc > 1:3889426/1‑150 (MQ=255) ggCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAAc > 1:4093591/1‑150 (MQ=255) tggggcgcgACCGGGCCGCACCGCGGCCCCGGC‑AATCTAGGTTGCGAAGCTGAAAATGGGGGGCTGCTTCGCCGCCCTTGCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCAc < 2:2066888/145‑1 (MQ=37) tgtCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGATCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCa < 2:3341171/150‑1 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAg > 1:1435296/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAg > 1:1435109/1‑150 (MQ=255) gAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGAt > 1:2579764/1‑150 (MQ=255) aGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCAc > 2:771861/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCTCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTTCGATGCTTCTGCCGCAACGGCACCAGTATATCAccc > 2:2797477/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCa > 1:282816/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTCGATCACCCAg > 2:2864867/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAg > 1:1023642/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAg > 1:1907253/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGGTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAg > 1:524081/1‑150 (MQ=255) gCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGATTCGCAGCCCTTTCGCGACACAAGGCCGCTACCACAGAGCCCGCGATGGACTTTCAACTGCGATGCTTCTGCCGCAACGGCACAAGTATATAACCCAGcc > 1:868854/1‑150 (MQ=38) cAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGccc > 2:2555101/1‑150 (MQ=255) cAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGccc > 1:3452161/1‑150 (MQ=255) aaaGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCg > 1:3092447/1‑150 (MQ=255) aGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGtt < 2:3310605/150‑1 (MQ=255) cGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTtgt > 1:468411/1‑150 (MQ=255) ccccGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACTAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTgat < 2:1061410/150‑1 (MQ=255) cccGGC‑ACTCTACGTCGCTAACCTGAAAAGCTGGGGCTGCTTCGCAGCCCTTGCGCCACACACGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTgatc < 1:1752461/150‑1 (MQ=255) cccGGC‑AATCTAAGTTGCTAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTgatc < 2:464548/150‑1 (MQ=255) cccGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTgatc > 1:1239241/1‑150 (MQ=255) ggC‑AATCTAAGGTGCGACGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTgatcgat < 2:3512308/150‑1 (MQ=255) gcc‑AATCTACGTCGCTAAGCTCAAAAGGTGGCGCTGCTCCGCACCCCTTACGCCACACACGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTgatcgat < 1:3550386/148‑1 (MQ=255) atatAAGTGGCTACGCTGAAAATCGGGGGCTGCTTCGCAGCCCTTTCGCCACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCa < 2:1200234/147‑1 (MQ=38) gAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGc > 2:1363352/1‑150 (MQ=255) gAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGc > 1:1861456/1‑150 (MQ=255) tGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCa > 1:3948198/1‑150 (MQ=255) gAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCaa > 2:2204869/1‑150 (MQ=255) aaaaTCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAAc > 2:446353/1‑150 (MQ=255) cgaaagggCTGCGAAGCAGCCCCTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCg > 1:3137760/6‑150 (MQ=255) cgaaagggCTGCGAAGCAGCCCCTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCg > 1:18289/6‑150 (MQ=255) tCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCGc > 1:3005190/1‑150 (MQ=255) gaaagggCTGCGAAGCAGCCCCTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCGc > 1:4355307/5‑150 (MQ=255) aaagggCTGCGAAGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCGcc > 2:2095510/4‑150 (MQ=255) gctgctTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGGTGTGATCGATCTCATGCATCAACGCCAGCAACCCGCCCAGtt > 1:4362273/1‑150 (MQ=255) tgctTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCGCCCAGTTcc < 2:4130945/150‑1 (MQ=255) tgctTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCGCCCAGTTcc > 1:4187028/1‑150 (MQ=255) ttCGCCGCCCTTCCGCGACACATGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCGCCCAGTTCCCCt < 2:521451/150‑1 (MQ=255) ttCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCGCCCAGTTCCCCt > 2:3387519/1‑150 (MQ=255) ttCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCGCCCAGTTCCCCt > 1:405587/1‑150 (MQ=255) | CAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGC‑AATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACCCAGCCCGTTGTGATCGATCTCATGCATCAACGCCAGCAACCCGCCCAGTTCCCCT > NC_002947/914984‑915279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |