Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 955,154 | G→A | 9.2% | intergenic (+105/‑208) | cyoE → / → alaC | protoheme IX farnesyltransferase/aminotransferase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 955,154 | 0 | G | A | 9.2% | 268.8 / 15.2 | 98 | intergenic (+105/‑208) | cyoE/alaC | protoheme IX farnesyltransferase/aminotransferase |
Reads supporting (aligned to +/- strand): ref base G (43/46); new base A (3/6); total (46/52) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.99e-01 |
Only 100 of 102 total aligned reads displayed.
ACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGC > NC_002947/955006‑955302 | aCAGCCAGACCGCTGCGGTTGTGCTGTTGAACTTCGCACGCTGAAACTGCTGCCTTTTTCACGAAAACCCGGGCAACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAAACCGCTCCTACAAGGt < 1:155555/150‑1 (MQ=38) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAATCCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTc < 2:3263366/150‑1 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTc < 2:2749605/150‑1 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTc < 2:3263324/150‑1 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCGCTTCGC‑GGGGGAACCCGCGCCGACCAgggtg > 1:1735055/1‑147 (MQ=255) gCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAAACCGCTCCTACAAGGttac > 2:2790275/1‑148 (MQ=255) ccAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCt < 1:2918796/150‑1 (MQ=255) cAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTg < 1:2852808/150‑1 (MQ=255) cAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTg < 1:2561845/150‑1 (MQ=255) cAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAAACCGCTCCAACAAGGTTccgg > 2:3937322/1‑148 (MQ=255) aGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAAGTGCTGCCTGTTTCACGAAAACCCCGGCCTCTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCGGGGCTCTTCGC‑GGGTAAACCCGCTCCTACCCGGTTCgtgt < 2:494172/150‑1 (MQ=255) aGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGt < 2:2839473/150‑1 (MQ=255) aGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGt < 1:719996/150‑1 (MQ=255) aCCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAAACCGCTCCGACAAGGTTGCTGTAg > 2:4261689/1‑150 (MQ=255) ccGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAgg < 2:1485955/150‑1 (MQ=255) cGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGa < 2:3010037/150‑1 (MQ=255) cGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGa < 2:4312527/150‑1 (MQ=255) gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑‑CTGTGCTGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGA‑Gc < 1:1886367/150‑1 (MQ=25) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGA‑Gc < 2:246154/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGA‑Gc < 2:2903532/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑Gc < 1:475235/150‑1 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑Gc < 1:475127/150‑1 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑Gc < 1:3093212/150‑1 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑Gc < 1:1158589/150‑1 (MQ=255) tGCGTATGAGCTGATGACCTACGCACGATGAAACTGCTGCCTGTTTCACTAAAACCCCGCCCACTGTGCCGGGGTATTTTATTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCg < 2:2569575/150‑1 (MQ=38) tGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑‑CTGTGCTGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGA‑GCgg < 1:3794698/150‑1 (MQ=25) gCGGTTGTGCTGATGCCCTACGCACGCTGAAACTGCGGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGTTTTTTTTTTGGGGGTATTTTT‑TCTGTGCTGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGA‑GCgg < 1:4326311/150‑1 (MQ=25) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCgg < 1:3296377/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCgg < 2:3590650/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCggg < 1:4274752/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCggg < 1:2237250/150‑1 (MQ=255) ggATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGt < 2:613526/150‑1 (MQ=255) gATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGtt < 1:3050452/150‑1 (MQ=255) gCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGACAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTAccc < 2:2231241/150‑1 (MQ=255) tgatgaCCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGA‑GCGGGTTTACCcgc < 2:272561/150‑1 (MQ=37) tgatgaCCGACGCACGCTGAAACTGCTGCCTGTATCACGAAAACCCCGGCCACTGTGCCGGGGTATTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCcgc < 2:3358492/150‑1 (MQ=255) gatgaCCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAAACCGCGCCGACAAGGTTCCGGTAGGA‑GCGGGGTTTACcgcg > 2:3832093/1‑150 (MQ=255) ccTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAATCCCGCTCCTACAAGGTTCCTGGAGGT‑GCGGGTTTTCCCGCGAagag > 2:3363419/1‑150 (MQ=255) ccTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGGGAACCCGCGCCAACAAGGGTGCGGTAGGA‑GCGGGGTTTCCCCCGCagag > 1:2253098/1‑150 (MQ=255) ccTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTGTGGGGGTATTTTT‑CCAGTGCCGGCCTCTTCGC‑GGGGAAAACCCCAACAACGAAGTTACGGGAGGG‑GCGGGTGTTCCcgcgtaaag > 1:2252846/1‑145 (MQ=255) cTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTGAACCCCCGCCGACAAGGTTCCGGTAGGT‑GCGGGGTTTCCCGCGGAGAgg > 1:714139/1‑150 (MQ=255) cTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCGGTAGGG‑GCGGGTTTACCCGCGAAGAgg > 2:713829/1‑150 (MQ=255) gAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAAACCGCGCCTACAAGGTTCCTGGAGGA‑GCGGGTTTACCCGCGCAGAGGCCAGCGCC‑Gaa > 2:1746550/1‑150 (MQ=38) aCTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑Gaaaaa < 2:2560407/150‑1 (MQ=255) aCTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTGT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑Gaaaaa < 2:2635085/150‑1 (MQ=255) aCTGCTGCCTGTCGCACGAAACCCCCGGCCAGTGTGCGGGGTTTTTTTTTGGGGGGTATTTTT‑CGGGGGCCGGCCTCTGGGC‑GGGTAAACCCGCTCCTCCCCGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑Gaaaaa < 2:3810503/150‑1 (MQ=25) tgcCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGGTAACCCCCTCCGACAAGGTTACTGTAGGA‑GCGGGTTTTCCCGCGGAGAGGCCAGCCCC‑Gacaaataaaa > 2:245371/1‑150 (MQ=255) ccTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTAGC‑GGGTTAACACCCGCCGACAAGGTTGCAGGTGGAGGGGGGTTTACCC‑CGAAGGGGGCCGCACA‑Cgcaaataaaaat > 1:1793927/1‑150 (MQ=255) ccTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTATTCGC‑GGGTAAACCCGCTCCTACCAGGTTCCGGTAGGA‑GCGGGTTTACCCGCGTAGTGGCCAGCAAA‑Gaaaaataaaaat > 2:364766/1‑150 (MQ=38) tGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTAGCGGGGTATACCC‑CGCCCACCACGTTGGGGGTGGG‑GGGGGGGTTCCCGCGGAGAGGCCCGCCCA‑Gcaaaaaaaaaaaaa > 1:3129213/1‑147 (MQ=255) tttCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAAACCGCACCTACAAGGTTGCTGTATGA‑GCGGGTTTTCCCGCGAAGAGGCCAGCAAA‑GAAAAATAAAAATACCt > 2:4223411/1‑150 (MQ=38) tCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCACCTACAAAGTTCCGGTAGGA‑GCGGGTGTACCCCCCCACAGGCCCGCAAC‑GAAAAATAAAAATAccagg > 2:789220/1‑147 (MQ=37) aCGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAAACCCCTCCGACCAGGTTGCGGGTGGG‑GCGGGGTTAACCGCGCAGCGGCCAGCACC‑GAAAAATAAAAAAACCTGCtt > 2:4159108/1‑150 (MQ=255) aaCCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCGTCGC‑GGGGAAACCCGCACCCACAAGGGTCCGGGAGGC‑GCGGGGGTACCCGCGCAGAGGCCCCCCCC‑GCAAAAAAAAAAAACCGGATTTTCaa > 2:1956709/1‑150 (MQ=255) ccccGGCCCCTGTGCGGGTGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACACGGTTCCTTTTGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCaaaa < 1:734189/150‑1 (MQ=37) aCTGTGCCGGGGATTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAAACCCCTCCTACAAGGGTGCTGTAGGG‑GCGGGTTTTCCCGCGACGAGGCCAGCACA‑GAAAAAAAAAAATACCTGATTTTGAAAAAATAGAta > 2:2791069/1‑149 (MQ=37) cTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCt < 2:3381908/150‑1 (MQ=255) gttttttttttGGGGTTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGTTAAACCCGCTCCTACACGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTc < 2:429023/148‑1 (MQ=255) ttttttttttGGGGTTATTTTT‑CCGGTGCCGGCCTCTTCGC‑GGTTAAACCCGCTCCTACAAGGTTCCTGTCGGA‑GCGGGTTAACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCt < 2:1877266/149‑1 (MQ=38) ttttttGGGGGTTTTTTTCCCGGTGCCGCCCTCTTCGC‑GGGAACCCCCGCTCCTACACGGTACGTGTAGGA‑GCGGGTTCACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCtaat < 1:2702163/150‑1 (MQ=37) tGGGGGTATTTTC‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACa < 2:1028763/150‑1 (MQ=255) ggTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTTAACCCGCTCCTACAAGGTTGCTGGAGGA‑GCGGGTTTAACCGCGGAGGGGCCAGCACC‑GGAAAATAAAAATACCTGTTTTTAAAAAAATAGGTATTAAAAGTTGTAATAAAACAGGaa > 2:3510506/1‑150 (MQ=25) ggTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAAGCCGCTCCTACAATGTTGCTGTAGGT‑GCGGGTTTAGCCGCGTAGAGGCCAGCACA‑GAAAAATTAAAATACCTGATTTTGTAAAAATAGATCTGAAAAGTTGTAATAAAAGAGGaa > 2:1441133/1‑150 (MQ=25) aTTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAAtt < 2:3075426/150‑1 (MQ=255) aTTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAAtt < 2:3075433/150‑1 (MQ=255) cgtgtgCCGCCCTCTGGGG‑GGGTAACCCCGCTCCTCCACGGTTCCTGTTGGC‑GCGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCtt < 1:3216641/148‑1 (MQ=255) ttCGC‑GGGTAAACCCGCGCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGTTCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGt > 2:1183987/1‑150 (MQ=255) cgc‑gGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGttt > 2:3702639/1‑150 (MQ=255) gc‑gGGTAAACCCGCTCCTACACGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTc < 2:77860/150‑1 (MQ=255) gc‑gGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAGTACAGGAAATTATCCTTTACAGGCATCCTGTTTc > 2:3148245/1‑150 (MQ=255) gc‑gGGAAAACCCGCTCCTACAAGGTTCCTGTTGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTc < 1:713829/150‑1 (MQ=255) ggggttcaaCCCGATCCTACACGGTTCCTGTTGGT‑GGGTGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTc < 1:2790275/143‑1 (MQ=255) gtaatgccGCTCCTACAAGGTTCGTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAATTAGATCTGAATAGTTCTAATAATACAGGTAATTATCGTTTACAGGCATGCTGTTTCGGct > 2:2341787/7‑149 (MQ=38) aaaCCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACt > 2:3899452/1‑150 (MQ=255) aaCCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTa > 1:1241004/1‑150 (MQ=255) cccGCTCCTACAGGAACCTTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:1961007/1‑150 (MQ=38) ccGCTCCTACAGGAACCTTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:3496614/1‑150 (MQ=38) ccGCTCCTACAGGAACCTTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:1238897/1‑150 (MQ=38) ccGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACAGGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:1363848/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:1156226/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:378955/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:2525492/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:4346146/1‑150 (MQ=255) cGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtctt > 2:2354765/1‑150 (MQ=255) gcacacacacGGTCCCGGTCGGC‑GGGGGTTTCCCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc < 1:3832093/144‑1 (MQ=255) gCTCCTACACGGTTCCTGTAGGC‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc < 2:1331475/150‑1 (MQ=255) gCTCCTACACGGTACGTGTAGTC‑GGGGGTTTCCCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc < 1:3937322/150‑1 (MQ=255) gCTCCTACAAGGTTCCTGTAGGC‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc < 2:2814860/150‑1 (MQ=255) gCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 1:1556563/1‑150 (MQ=255) cTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAt > 2:643587/1‑150 (MQ=255) tACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 1:1209208/1‑150 (MQ=255) tACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 1:266595/1‑150 (MQ=255) tACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAta > 2:2952856/1‑149 (MQ=255) aCAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTGCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTATGATTc > 1:3136085/1‑150 (MQ=255) cAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa > 2:2285089/1‑150 (MQ=255) cAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa > 1:1119233/1‑150 (MQ=255) aaGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 2:3241215/1‑150 (MQ=255) ggTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgc > 2:2462501/1‑150 (MQ=255) ggTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgc > 2:3757116/1‑150 (MQ=255) ggTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATCATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgc > 2:2858249/1‑150 (MQ=255) | ACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGA‑GCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGC > NC_002947/955006‑955302 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |