Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,194,921 C→T 5.9% L352L (CTG→TTG)  uxpA → lipoprotein UxpA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,194,9210CT 5.9% 712.2 / 22.0 221L352L (CTG→TTG) uxpAlipoprotein UxpA
Reads supporting (aligned to +/- strand):  ref base C (116/92);  new base T (7/6);  total (123/98)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 225 total aligned reads displayed.

TGTTTGCCGGCTGCCGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGATAGCAGCATGCCCGTGT  >  NC_002947/1194772‑1195068
                                                                                                                                                     |                                                                                                                                                   
tGTTTGCCGGCTGCCGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAAc                                                                                                                                                     >  1:3032071/1‑150 (MQ=255)
tGTTTGCCGGCTGCCGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAAc                                                                                                                                                     >  1:1789394/1‑150 (MQ=255)
   ttGCCGGCTGCCGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCCGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTgc                                                                                                                                                  <  2:3803786/150‑1 (MQ=255)
   ttGCCGGCTGCCGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTgc                                                                                                                                                  <  1:2224881/150‑1 (MQ=255)
    gcaccgCTGCCCCGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTgcg                                                                                                                                                 >  2:4477136/6‑150 (MQ=255)
       cGGCTGCCGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCa                                                                                                                                              <  1:394886/150‑1 (MQ=255)
        ggCTGCCGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAg                                                                                                                                             <  1:2848980/150‑1 (MQ=255)
         gCTGCCGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGc                                                                                                                                            >  1:335102/1‑150 (MQ=255)
          cTGCCGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCTGGCGCAGTTGCGCCTGCa                                                                                                                                           <  1:1252458/150‑1 (MQ=255)
             ccGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACg                                                                                                                                        <  1:3236856/150‑1 (MQ=255)
              cGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTTCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACgg                                                                                                                                       >  1:4358852/1‑150 (MQ=255)
               ggggCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAggccccag                                                                                                                                      >  2:756771/1‑143 (MQ=255)
               ggggCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACggg                                                                                                                                      <  2:105479/150‑1 (MQ=255)
               ggggCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACggg                                                                                                                                      >  1:1324735/1‑150 (MQ=255)
                gggCAGCGGGGCCTTCCGCCTGCGCTGCCAGCGTGGGGCCGGCCAGTGGCAGGTCGACGGGCGTTTTGTCCCGGCCATTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAGTTGCTGGCGCAGTTGCGCCTGCaattgcg                                                                                                                                     <  1:4437634/150‑6 (MQ=255)
                 ggCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCTGGCGCAGTTGCGCCTGCaattgcgc                                                                                                                                    <  2:1826279/150‑7 (MQ=255)
                    aGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGggccggc                                                                                                                                 <  1:4291712/150‑1 (MQ=255)
                      cGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCa                                                                                                                               >  2:2606196/1‑150 (MQ=255)
                      cGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCa                                                                                                                               >  1:3205582/1‑150 (MQ=255)
                       ggTGCCGTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCAc                                                                                                                              <  2:3685358/150‑1 (MQ=255)
                           ccTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCgg                                                                                                                          <  1:4166120/150‑1 (MQ=255)
                            cTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGc                                                                                                                         >  1:3274546/1‑150 (MQ=255)
                             ttCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGcc                                                                                                                        >  2:4362266/1‑150 (MQ=255)
                             ttCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGcc                                                                                                                        >  1:1108088/1‑150 (MQ=255)
                             ttCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGcc                                                                                                                        >  1:2616830/1‑150 (MQ=255)
                              tCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCt                                                                                                                       <  1:1145359/150‑1 (MQ=255)
                               ccGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTg                                                                                                                      <  1:1688556/150‑1 (MQ=255)
                                   cTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTc                                                                                                                  <  2:4000852/150‑1 (MQ=255)
                                      cgcTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGAc                                                                                                               >  2:2019910/1‑150 (MQ=255)
                                              gCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCt                                                                                                       >  1:249922/1‑150 (MQ=255)
                                               cGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTg                                                                                                      <  2:1218974/150‑1 (MQ=255)
                                                    ggccggccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCcg                                                                                                 >  1:2710489/1‑150 (MQ=255)
                                                    ggccggccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCcg                                                                                                 >  2:848053/1‑150 (MQ=255)
                                                     gccggccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCcgc                                                                                                >  1:3581924/1‑150 (MQ=255)
                                                     gccggccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCcgc                                                                                                >  1:4496387/1‑150 (MQ=255)
                                                     gccggccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCGGGCTCGACCAGCCGCTGGCCcgc                                                                                                >  1:2108995/1‑150 (MQ=255)
                                                      ccggccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGggccg                                                                                                                                   <  1:1753961/114‑1 (MQ=255)
                                                       cggccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCcgcgc                                                                                              >  2:146899/1‑150 (MQ=255)
                                                        ggccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCcgcgcg                                                                                             >  2:2275380/1‑150 (MQ=255)
                                                        ggccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCcgcgcg                                                                                             >  2:3020891/1‑150 (MQ=255)
                                                        ggccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCcgcgcg                                                                                             >  2:2795856/1‑150 (MQ=255)
                                                         gccAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCgcgcgc                                                                                            <  1:1314057/150‑1 (MQ=255)
                                                            aGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGcccc                                                                                         >  2:2907625/1‑150 (MQ=255)
                                                                gCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGc                                                                                     >  1:3508311/1‑150 (MQ=255)
                                                                   gTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCtt                                                                                  <  1:549112/150‑1 (MQ=255)
                                                                    ttCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCTGGCGCAGTTGCGCCTGc                                                                                                                                            <  1:2361024/91‑1 (MQ=255)
                                                                      cGACGGGCGTGTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTtgtg                                                                               <  1:850373/150‑1 (MQ=255)
                                                                           ggCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGcgcc                                                                          >  2:1588762/1‑150 (MQ=255)
                                                                              gTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCcgcg                                                                       >  1:1427188/1‑150 (MQ=255)
                                                                              gTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCcgcg                                                                       >  1:3010120/1‑150 (MQ=255)
                                                                               ttttttCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGa                                                                      <  1:717259/150‑1 (MQ=255)
                                                                                tttttCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGAt                                                                     <  2:2118736/150‑1 (MQ=255)
                                                                                  tttCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATAc                                                                   <  1:641725/150‑1 (MQ=255)
                                                                                   ttCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCATGTGGCGCCGCGATccc                                                                  >  2:3847966/1‑150 (MQ=255)
                                                                                    tCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATAccc                                                                 >  2:2410580/1‑150 (MQ=255)
                                                                                      ccGGCCTTTGAACAGCACCTGGCGGCTGCCGCGCATCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAAGGGGCCGGCCACGCTGCCTGGCTCGACCAGCCGCTGGCCCGCGAGCCCCAGGCCTTGTGGCGCCGCGATACCCGt                                                               <  1:3626700/150‑1 (MQ=255)
                                                                                      ccGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGt                                                               >  1:4028893/1‑150 (MQ=255)
                                                                                      ccGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGt                                                               >  1:3032407/1‑150 (MQ=255)
                                                                                       cGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTg                                                              >  1:3847106/1‑150 (MQ=255)
                                                                                          ccTTTGAACAGCAACGGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCg                                                           <  1:522622/150‑1 (MQ=255)
                                                                                            tttGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCCCCGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCGGGTGGCGCCGCGATACCCGTGGCGGt                                                         >  2:1704080/1‑150 (MQ=255)
                                                                                            tttGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGt                                                         >  2:2703118/1‑150 (MQ=255)
                                                                                                 aCAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTg                                                    >  2:796808/1‑150 (MQ=255)
                                                                                                  cAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTgg                                                   >  2:3279894/1‑150 (MQ=255)
                                                                                                   aGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTggg                                                  >  1:3974819/1‑150 (MQ=255)
                                                                                                   aGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTggg                                                  >  1:3553237/1‑150 (MQ=255)
                                                                                                   aGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTggg                                                  >  1:720036/1‑150 (MQ=255)
                                                                                                    gCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGa                                                 <  2:3391492/150‑1 (MQ=255)
                                                                                                    gCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGa                                                 <  1:958520/150‑1 (MQ=255)
                                                                                                    gCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGa                                                 <  1:1026474/150‑1 (MQ=255)
                                                                                                      aaCTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGAct                                               <  1:3744724/150‑1 (MQ=255)
                                                                                                        cTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGActgc                                             <  1:658066/150‑1 (MQ=255)
                                                                                                          ggCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGActgcct                                           <  2:3087670/150‑1 (MQ=255)
                                                                                                          ggCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGActgcct                                           <  2:1096557/150‑1 (MQ=255)
                                                                                                             gcCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCctgct                                        <  2:919482/150‑1 (MQ=255)
                                                                                                             gcCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCctgct                                        <  1:154300/150‑1 (MQ=255)
                                                                                                              ccTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCctgctg                                       >  2:2367514/1‑150 (MQ=255)
                                                                                                              ccTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCctgctg                                       >  2:4439858/1‑150 (MQ=255)
                                                                                                                tGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAATGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCa                                     >  2:3898683/1‑150 (MQ=255)
                                                                                                                    gcgcAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCaa                                 <  2:1198790/150‑1 (MQ=255)
                                                                                                                    gcgcAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCaa                                 >  2:3228002/1‑150 (MQ=255)
                                                                                                                    gcgcAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGAGACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCaa                                 >  1:3437338/1‑150 (MQ=255)
                                                                                                                         gCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCtt                            <  2:3265835/150‑1 (MQ=255)
                                                                                                                          cTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTg                           >  2:1512498/1‑150 (MQ=255)
                                                                                                                          cTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTg                           >  1:786869/1‑150 (MQ=255)
                                                                                                                          cTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTg                           >  1:726719/1‑150 (MQ=255)
                                                                                                                           tGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTgg                          <  2:3205582/150‑1 (MQ=255)
                                                                                                                           tGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTgg                          >  1:4312608/1‑150 (MQ=255)
                                                                                                                            gCGTGTCGCGCTATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGc                         <  2:4358852/150‑1 (MQ=255)
                                                                                                                               tgtCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCcga                      <  2:1698122/150‑1 (MQ=255)
                                                                                                                                  cggcccgttGCTGGCGCAGTTGCGCCTGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCcgacga                   >  2:421678/8‑150 (MQ=255)
                                                                                                                                   gcgcAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGAt                  >  2:605188/1‑150 (MQ=255)
                                                                                                                                       aaTTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGATagca              >  2:4483900/1‑150 (MQ=255)
                                                                                                                                       aaTTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGATagca              <  1:312530/150‑1 (MQ=255)
                                                                                                                                       aaTTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGATagca              >  2:2219517/1‑150 (MQ=255)
                                                                                                                                           gCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGATAGCAGCAt          <  1:159359/150‑1 (MQ=255)
                                                                                                                                               gcgcAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGATAGCAGCATGccc      >  2:2762844/1‑150 (MQ=255)
                                                                                                                                               gcgcAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGATAGCAGCATGccc      >  2:3360031/1‑150 (MQ=255)
                                                                                                                                                 gcAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGATAGCAGCATGCCCgt    <  1:1150374/150‑1 (MQ=255)
                                                                                                                                                   aaCTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGATAGCAGCATGCCCgtgt  <  2:1324735/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
TGTTTGCCGGCTGCCGGGGCAGCGGTGCCTTCCGCCTGCGCTGCCAGCGTGTGGCCGGCCAGTGGCAGTTCGACGGGCGTTTTTTCCCGGCCTTTGAACAGCAACTGGCGCCTGCCGCGCAGCTGCGTGTCGCGCAATTGCAGGCGCAACTGCGCCAGCAACGGGCCGGCCACGCGGCCTGGCTCGACCAGCCGCTGGCCCGCGCGCCCCAGGCCTTGTGGCGCCGCGATACCCGTGGCGGTAGCTGGGACTGCCTGCTGCATCAAGCCTTGGCCGACGATAGCAGCATGCCCGTGT  >  NC_002947/1194772‑1195068

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑