| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,224,637 | C→G | 6.3% | W16S (TGG→TCG) ‡ | gltK ← | glutamate/aspartate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,224,637 | 0 | C | G | 6.3% | 700.4 / 28.9 | 205 | W16S (TGG→TCG) ‡ | gltK | glutamate/aspartate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (118/74); new base G (4/9); total (122/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
Only 100 of 210 total aligned reads displayed.
AATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGCGTG > NC_002947/1224489‑1224786 | aaTCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCa < 2:608568/150‑1 (MQ=255)aaTCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCa < 2:1658244/150‑1 (MQ=255) tCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCaga < 1:4374472/150‑1 (MQ=255) gAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAgg < 1:3758517/150‑1 (MQ=255) aGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAggg < 2:2618469/150‑1 (MQ=255) cGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGggca > 2:897093/1‑150 (MQ=255) cGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGggca < 2:2366497/150‑1 (MQ=255) gAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCCTGCCCTCTGGGAGggcatg < 2:742201/150‑3 (MQ=255) gAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCTGGGAGggcatg < 1:1433365/150‑3 (MQ=255) gAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCTGGGAGggcatg < 1:179881/150‑3 (MQ=255) gAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCTGGGAGggcatg < 1:3888225/150‑3 (MQ=255) gtTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACAACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGc > 1:949917/1‑150 (MQ=255) cGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGga < 1:708258/150‑1 (MQ=255) aGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGgatga > 2:594345/1‑150 (MQ=255) ggCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCt > 2:10802/1‑150 (MQ=255) ggCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCt < 1:2365738/150‑1 (MQ=255) aCAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAtccattt > 2:1872833/1‑150 (MQ=255) cagcagTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAtccatttc < 1:1682958/150‑1 (MQ=255) agcagTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAtccatttcc > 2:2922671/1‑150 (MQ=255) agTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAtccatttccatt < 1:430656/150‑1 (MQ=255) agTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAtccatttccatt < 2:344193/150‑1 (MQ=255) cTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTg < 2:2202995/150‑1 (MQ=255) ttGACGACAGGCGCATCAGTGTCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGc > 2:104560/1‑150 (MQ=255) ttGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCGCGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGc > 2:1415942/1‑150 (MQ=255) ttGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGc > 1:2283373/1‑150 (MQ=255) aGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACg < 2:4366307/150‑1 (MQ=255) ggCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACgg < 2:3686703/150‑1 (MQ=255) gcgcATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGa < 2:2363286/150‑1 (MQ=255) cATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAAt < 2:785634/150‑1 (MQ=255) cAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcag < 1:3609090/150‑1 (MQ=255) cAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcag < 1:3854462/150‑1 (MQ=255) aGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcagg < 1:864180/150‑1 (MQ=255) aGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcagg < 1:1083145/150‑1 (MQ=255) tGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTCGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcc > 2:689049/1‑150 (MQ=255) gCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcca < 1:2291369/150‑1 (MQ=255) gCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcca < 1:2914981/150‑1 (MQ=255) cccAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcca > 2:1748118/2‑150 (MQ=255) tGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACgg < 1:674179/150‑1 (MQ=255) gCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGAc < 2:3157691/150‑1 (MQ=255) cAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGACATCAGGCCAGGCACGGCGACttt > 2:2714090/1‑150 (MQ=255) cAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACttt > 1:4127963/1‑150 (MQ=255) aGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTttc > 1:1471378/1‑150 (MQ=255) aCGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTttcttc < 1:2059301/150‑1 (MQ=255) gATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTtctc > 1:2398802/1‑150 (MQ=255) tACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGa < 1:136918/150‑1 (MQ=255) cgccgATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCa > 2:4407084/1‑150 (MQ=255) gccgATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCAt > 2:1343173/1‑150 (MQ=255) aaTGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATgcg < 2:2631734/149‑1 (MQ=255) gACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCAt > 1:1901744/1‑150 (MQ=255) atggtcATGACCCTCAAACTGATGGTCATGGCCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATg > 2:896756/6‑150 (MQ=255) cTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGa < 2:1146898/150‑1 (MQ=255) tCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGag < 1:1655187/150‑1 (MQ=255) tCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGag > 2:3533670/1‑150 (MQ=255) tCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGag > 2:3964929/1‑150 (MQ=255) tCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGag > 2:2094285/1‑150 (MQ=255) tCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGag > 1:2969438/1‑150 (MQ=255) cccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagc < 1:3270640/150‑1 (MQ=255) ccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagca > 1:1598785/1‑150 (MQ=255) ccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagca > 2:69039/1‑150 (MQ=255) ccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagca < 1:1871813/150‑1 (MQ=255) ccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagca > 1:837590/1‑150 (MQ=255) cATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagcag > 1:4170300/1‑150 (MQ=255) cATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagcag < 2:505425/150‑1 (MQ=255) cATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagcag < 2:2760362/150‑1 (MQ=255) aTGACCCTCAAACTGATGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagcagc > 1:602975/1‑150 (MQ=255) aTGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagcagc > 1:651418/1‑150 (MQ=255) aTGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagcagc > 1:2905997/1‑150 (MQ=255) cATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAg > 1:3287438/1‑150 (MQ=255) cATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAg > 2:2258197/1‑150 (MQ=255) aTCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAgg > 2:4190547/1‑150 (MQ=255) aTCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAgg > 2:1834213/1‑150 (MQ=255) tCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGc > 1:3869892/1‑150 (MQ=255) gTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCa > 2:2404634/1‑150 (MQ=255) gTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCa > 2:400437/1‑150 (MQ=255) ggTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCCTGCGCATGAGCAGCATCAGGCCCATGTTCAg > 1:1520378/1‑150 (MQ=255) ggTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAg < 2:2878814/150‑1 (MQ=255) gTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAgg < 1:2346868/150‑1 (MQ=255) gTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAgg < 2:4476186/150‑1 (MQ=255) gTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAgg < 1:809241/150‑1 (MQ=255) tCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAggg > 2:2940518/1‑150 (MQ=255) tCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAggg > 1:2548026/1‑150 (MQ=255) tCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAggg < 1:3456964/150‑1 (MQ=255) tGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGa < 2:1209308/150‑1 (MQ=255) cctgcctGCCCTCTGGGAGGGCATGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAAGCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCCTGGTCAGGGTgc > 2:4252536/7‑149 (MQ=255) tgcctGCCCTCTGGGAGGGCATGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAACTCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAg > 2:3289064/5‑150 (MQ=255) gcctGCCCTCTGGGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGt > 1:1914971/4‑150 (MQ=255) ccATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGt > 1:3951975/1‑150 (MQ=255) ccATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGt > 2:1778184/1‑150 (MQ=255) ccATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGt > 2:3225347/1‑150 (MQ=255) ccATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGt > 1:3371386/1‑150 (MQ=255) ccATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGt > 1:2626628/1‑150 (MQ=255) cctGCCCTCCCAGAGGGCAGGCAGGGTGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTa > 1:2214635/3‑150 (MQ=255) cATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTa > 2:3346380/1‑150 (MQ=255) cATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTa > 1:307271/1‑150 (MQ=255) aTGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAg > 2:3004753/1‑150 (MQ=255) tGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGa > 1:4057116/1‑150 (MQ=255) cccTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATc > 1:1058120/1‑150 (MQ=255) ccTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCa > 2:4087915/1‑150 (MQ=255) cAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGCGTg > 2:82594/1‑150 (MQ=255) cAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGCGTg > 2:2674334/1‑150 (MQ=255) | AATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCATCAGGCCCATGTTCAGGGTGAAGTAGATCAGCGTG > NC_002947/1224489‑1224786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |