| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,225,479 | G→T | 6.4% | intergenic (‑49/+97) | gltJ ← / ← gltI | glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,225,479 | 0 | G | T | 6.4% | 640.2 / 21.8 | 188 | intergenic (‑49/+97) | gltJ/gltI | glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (101/75); new base T (3/9); total (104/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.67e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 204 total aligned reads displayed.
GCGATGGTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTTTT > NC_002947/1225330‑1225628 | gcgatggTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCgg < 1:4420684/150‑1 (MQ=255) cgatggTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCggg < 1:3852438/150‑1 (MQ=255) gatggTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCgggg > 1:1154704/1‑150 (MQ=255) gatggTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCgggg < 2:4288845/150‑1 (MQ=255) cAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAg > 2:3405027/1‑150 (MQ=255) gCCCAGGCCGGTGATGTACCCGTCCAGAGAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGGTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGgc > 2:2981724/1‑150 (MQ=255) ggCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCa < 2:3152169/150‑1 (MQ=255) gCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGccccc < 1:1767361/150‑3 (MQ=255) gCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCAc < 1:3573819/150‑1 (MQ=255) gCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCAc < 2:1940868/150‑1 (MQ=255) gCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCAc < 2:1254965/150‑1 (MQ=255) cGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCCAGGCGCCCACgg > 1:1506632/1‑150 (MQ=255) ggTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGCCCCCGGa < 1:3891067/150‑1 (MQ=255) ggTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGCCCCCGGa < 1:32206/150‑1 (MQ=255) ggTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGa < 2:1344670/150‑1 (MQ=255) gTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGCCCCCGGAt < 1:1020983/150‑1 (MQ=255) gTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGCCCCCGGAt < 1:3927896/150‑1 (MQ=255) gTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGAt < 2:3787329/150‑1 (MQ=255) tGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGCCCCCGGATg < 1:4347106/150‑1 (MQ=255) tGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATg < 2:3013629/150‑1 (MQ=255) tGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGaaa < 1:2520320/150‑1 (MQ=255) gTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAg > 1:2516484/1‑150 (MQ=255) aCCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGt < 2:2369213/150‑1 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa > 2:441981/1‑150 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa < 2:2158230/150‑1 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa < 2:3762607/150‑1 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa > 2:2070556/1‑150 (MQ=255) aGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAg > 1:3215157/1‑150 (MQ=255) gTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGa > 1:3139483/1‑150 (MQ=255) aGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACt < 2:2092691/150‑1 (MQ=255) ggTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGa < 2:2516484/150‑1 (MQ=255) gTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAg > 1:107466/1‑150 (MQ=255) gTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAg > 2:352714/1‑150 (MQ=255) tttCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGt < 1:4249807/150‑1 (MQ=255) ttCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTg > 2:2876270/1‑150 (MQ=255) ttCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTg < 1:2128054/150‑1 (MQ=255) cTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCt < 2:2504463/150‑1 (MQ=255) cTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCt < 2:885957/150‑1 (MQ=255) cccACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCa < 2:4413402/150‑1 (MQ=255) cccACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCa > 2:4155310/1‑150 (MQ=255) cccACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTGCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCa > 2:4383138/1‑150 (MQ=255) cGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGa > 1:1397921/1‑150 (MQ=255) gTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGAtt < 1:895195/150‑1 (MQ=255) tGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc < 2:1888521/150‑1 (MQ=255) tGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc < 2:631613/150‑1 (MQ=255) tGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc < 1:2575018/150‑1 (MQ=255) gACGTGAAGAACACGCCCCAGTCCCAGTTGTAAGTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGt < 2:513561/150‑1 (MQ=255) ttGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCt > 2:2340098/1‑150 (MQ=255) ttGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCt > 1:3690625/1‑150 (MQ=255) gaagaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCg > 1:334696/1‑150 (MQ=255) gaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGa < 1:1344972/150‑1 (MQ=255) gaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGa < 1:143609/150‑1 (MQ=255) gaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGa < 1:2903726/150‑1 (MQ=255) cacGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCa > 2:825395/1‑150 (MQ=255) ccccAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAg < 2:2793496/150‑1 (MQ=255) cccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAgg > 1:4148026/1‑150 (MQ=255) ccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTAt > 2:2942409/1‑150 (MQ=255) ccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCGTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTAGTGCTCGTGAGCACCAGGCCACTAt > 1:472706/1‑150 (MQ=255) ttGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTAc < 1:2298027/150‑1 (MQ=255) tAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCCAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCCGGCCACTATTTACTGa > 1:1889926/1‑150 (MQ=255) tAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGa < 2:3138045/150‑1 (MQ=255) aaTTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAg < 2:917072/150‑1 (MQ=255) aaTTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAg > 2:1695830/1‑150 (MQ=255) aaTTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAg > 1:718072/1‑150 (MQ=255) aTTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAgg > 1:1237270/1‑150 (MQ=255) aTTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAgg > 1:4267845/1‑150 (MQ=255) aTCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCa < 2:715546/150‑1 (MQ=255) aTCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCa > 1:3529784/1‑150 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCCAGGCGCCCACGGATGAGAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 1:4292356/1‑150 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCTCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 1:4377543/1‑150 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 1:3624853/1‑150 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 1:2247538/1‑150 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 1:781229/1‑150 (MQ=255) cGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAgg > 1:3480420/1‑150 (MQ=255) gATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGaaa > 2:398325/1‑71 (MQ=255) gATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGaaa < 1:398325/71‑1 (MQ=255) gATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGAct < 1:1720663/150‑1 (MQ=255) aTTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGActt > 2:2649724/1‑150 (MQ=255) cccTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTtcttct > 1:86048/1‑150 (MQ=255) ccTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTtctc > 1:1557732/1‑150 (MQ=255) ccTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTtctc > 1:2804589/1‑150 (MQ=255) gACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCg > 2:1377296/1‑150 (MQ=255) gACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCg > 2:4248569/1‑150 (MQ=255) ggTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAg < 1:2046377/150‑1 (MQ=255) tCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtc > 2:2302797/1‑150 (MQ=255) aCGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcgg > 1:3959307/1‑150 (MQ=255) aCGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcgg > 1:3959364/1‑150 (MQ=255) cGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcggt < 2:2469883/150‑1 (MQ=255) gggCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcggtc < 1:3910136/150‑1 (MQ=255) gggCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcggtc > 1:1724625/1‑150 (MQ=255) aCCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGtcggct > 1:2438295/1‑150 (MQ=255) cTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTTGGtcggctcg > 1:2398731/1‑150 (MQ=255) cTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGtcggctcg > 1:2142757/1‑150 (MQ=255) aTCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAg > 2:1479894/1‑150 (MQ=255) ccGTGGGCGCCTTGCGCCCCCGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGCTCAGtt > 2:3592680/1‑150 (MQ=255) ccGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGtt < 2:1154704/150‑1 (MQ=255) gggggCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGtcggtcgg < 1:519403/134‑1 (MQ=255) gggggCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGtttt > 2:4336956/1‑150 (MQ=255) gggggCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGtttt > 2:3209680/1‑150 (MQ=255) ggggCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGttttt > 2:3875042/1‑150 (MQ=255) | GCGATGGTCCAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTTTT > NC_002947/1225330‑1225628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |