| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,225,486 | A→C | 6.9% | intergenic (‑56/+90) | gltJ ← / ← gltI | glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,225,486 | 0 | A | C | 6.9% | 624.3 / 25.4 | 205 | intergenic (‑56/+90) | gltJ/gltI | glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (108/82); new base C (6/9); total (114/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 206 total aligned reads displayed.
CAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTTTTTCAGCTC > NC_002947/1225339‑1225635 | gCCCAGGCCGGTGATGTACCCGTCCAGAGAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGGTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGgc > 2:2981724/1‑150 (MQ=255) ccAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGgcgc > 1:857045/1‑150 (MQ=255) ccAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGgcgc < 1:2137343/150‑1 (MQ=255) ggCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCa < 2:3152169/150‑1 (MQ=255) gCCGGTGATGTACCAGTCCGGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCAc > 1:3314822/1‑150 (MQ=255) gCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGccccc < 1:3548222/150‑3 (MQ=255) gCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCAc < 2:1254965/150‑1 (MQ=255) gCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCAc < 1:1155857/150‑1 (MQ=255) ggTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGa < 2:1344670/150‑1 (MQ=255) gTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGCCCCCGGAt < 1:3927896/150‑1 (MQ=255) gTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGCCCCCGGAt < 1:1020983/150‑1 (MQ=255) gTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGAt < 1:1698228/150‑1 (MQ=255) gTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGAt > 1:3810436/1‑150 (MQ=255) tGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGTGGGCGCCTTGCGCCCCCGGATg < 1:4347106/150‑1 (MQ=255) tGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATg < 2:3013629/150‑1 (MQ=255) tGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATg < 1:2532978/150‑1 (MQ=255) tGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGaaa < 1:2520202/150‑1 (MQ=255) tACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCACGGCGCCCCCGGATGAAAgg > 1:1542099/1‑150 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa < 1:2433703/150‑1 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa > 2:2070556/1‑150 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa < 2:3762607/150‑1 (MQ=255) cAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTa < 2:2158230/150‑1 (MQ=255) aGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAg > 1:3215184/1‑150 (MQ=255) gTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGa < 1:3671044/150‑1 (MQ=255) cAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGacac < 1:2397812/150‑1 (MQ=255) aGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACt < 2:2092691/150‑1 (MQ=255) tAGGTTTCGCTGCCCACTCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAAt < 1:2228919/150‑1 (MQ=255) ggTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGa < 2:2516484/150‑1 (MQ=255) gTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAg > 1:107466/1‑150 (MQ=255) tttCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGt < 1:4249807/150‑1 (MQ=255) tttCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGt > 1:1722134/1‑150 (MQ=255) ttCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTg > 2:2876270/1‑150 (MQ=255) cTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCt < 2:1912505/150‑1 (MQ=255) cTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCt < 2:2504463/150‑1 (MQ=255) cTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCt < 2:885957/150‑1 (MQ=255) cccACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCa > 2:4155310/1‑150 (MQ=255) aCGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGaa > 1:3429137/1‑150 (MQ=255) cGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGa > 1:1397961/1‑150 (MQ=255) gTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGAtt < 1:895195/150‑1 (MQ=255) tGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc < 2:631613/150‑1 (MQ=255) tGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc < 1:2575018/150‑1 (MQ=255) gggACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTc < 2:2904779/149‑1 (MQ=255) gACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGt < 1:1909071/150‑1 (MQ=255) gACGTGAAGAACACGCCCCAGTCCCAGTTGTAAGTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGt < 2:513561/150‑1 (MQ=255) ttGAAGAACACGCACCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGTGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTAGTgat > 2:2349130/1‑148 (MQ=255) gaagaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCg > 1:1760099/1‑150 (MQ=255) gaaCACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGa < 1:2903726/150‑1 (MQ=255) cacGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCa > 2:825395/1‑150 (MQ=255) cacGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCa > 2:2306658/1‑150 (MQ=255) ccccAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAg < 2:2793496/150‑1 (MQ=255) cccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAgg > 2:1784533/1‑150 (MQ=255) cccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAgg > 1:4148026/1‑150 (MQ=255) ccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGc > 2:440660/1‑150 (MQ=255) ccagtcccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGc > 1:1390506/1‑150 (MQ=255) ccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTAt > 2:3409739/1‑150 (MQ=255) ccagtTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCGTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTAGTGCTCGTGAGCACCAGGCCACTAt > 1:472706/1‑150 (MQ=255) ttGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTAc < 1:3524594/150‑1 (MQ=255) tAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGa < 2:3138045/150‑1 (MQ=255) tAATTCATCGGGATTTCCCCTCAGACGGTTGGTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGa < 2:3384790/150‑1 (MQ=255) aaTTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAg < 2:917072/150‑1 (MQ=255) aaTTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAg > 2:1695830/1‑150 (MQ=255) aTTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAgg > 1:4267845/1‑150 (MQ=255) tCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGAt < 1:3603978/150‑1 (MQ=255) tCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGAt < 1:704631/150‑1 (MQ=255) aTCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCa < 2:715546/150‑1 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCCAGGCGCCCACGGATGAGAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 1:4292356/1‑150 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCTCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 1:4377543/1‑150 (MQ=255) tCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAg > 1:2247583/1‑150 (MQ=255) cGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAgg > 1:873307/1‑150 (MQ=255) gATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGaaa > 2:398325/1‑71 (MQ=255) gATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGaaa < 1:398325/71‑1 (MQ=255) aTTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGActt > 2:2649724/1‑150 (MQ=255) ccTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTtctc > 1:2804589/1‑150 (MQ=255) tCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGt > 1:2097782/1‑150 (MQ=255) gACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCg > 2:4248569/1‑150 (MQ=255) gACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCg > 2:1377296/1‑150 (MQ=255) gttTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCtt < 1:3059187/150‑1 (MQ=255) cACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcg < 1:3162205/150‑1 (MQ=255) aCGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcgg > 1:3959364/1‑150 (MQ=255) aCGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcgg > 1:3959307/1‑150 (MQ=255) cGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcggt < 2:2469883/150‑1 (MQ=255) gggCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcggtc < 1:3910136/150‑1 (MQ=255) gggCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTgtcggta > 1:1794698/1‑149 (MQ=255) gCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGtcggtcgg > 2:4417872/1‑150 (MQ=255) aCCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCCGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGtcggct > 1:1493239/1‑150 (MQ=255) cTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGtcggctcg > 2:2942611/1‑150 (MQ=255) tCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGtcggctcggc < 2:4335237/150‑1 (MQ=255) aGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGAt < 1:2473026/150‑1 (MQ=255) aTCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAg > 2:1479894/1‑150 (MQ=255) aTCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAg > 2:4337044/1‑150 (MQ=255) tCCGTGGGCGCCTTGCGCCCCCGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGt > 2:3856793/1‑150 (MQ=255) ccGTGGGCGCCTTGCGCCCCCGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGCTCAGtt > 2:3592680/1‑150 (MQ=255) ccGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGtt < 2:1154704/150‑1 (MQ=255) gggggCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGtcggtcgg < 1:519403/134‑1 (MQ=255) gggggCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGtttt < 1:1320180/150‑1 (MQ=255) cgcAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTTTTTCAg < 2:4455640/150‑1 (MQ=255) gcAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTTTTTCAGc > 2:3175471/1‑150 (MQ=255) gcAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTTTTTCAGc > 1:759961/1‑150 (MQ=255) cAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTa < 2:3897591/84‑1 (MQ=255) cAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTa > 1:3897591/1‑84 (MQ=255) | CAGCCCAGGCCGGTGATGTACCAGTCCAGATAGGTTTCGCTGCCCACGCCGGTGGACTTGAAGAACACGCCCCAGTCCCAGTTGTAATTCATCGGGATTTCCCCTCAGACGGTTGTTTCACGGGCACCTTCGAGCATCCGGGGGCGCAAGGCGCCCACGGATGAAAGGTTAGACACTAATGAGTGGCCTGCAGAATTGATTCGTGCTCGTGAGCACCAGGCCACTATTTACTGAGGATCAGGACTTCTTCTCGTCCGCAGCCTTGTCGGTCGGCTCGGCGATCAGTTTTTTCAGCTC > NC_002947/1225339‑1225635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |