BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,264,633	G→C	5.5%	R265G (CGC→GGC)	PP_1106 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,264,633	0	G	C	5.5%	689.7 / 22.7	203	R265G (CGC→GGC)	PP_1106	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (111/78); new base C (9/2); total (121/82)
Fisher's exact test for biased strand distribution p-value = 2.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01

Only 100 of 210 total aligned reads displayed.

TTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTGCGTAGC  >  NC_002947/1264484‑1264782

ttGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCcggcg                                                                                                                                                       >  1:2709705/1‑150 (MQ=255)

       gTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGTGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGcgccg                                                                                                                                                >  1:128328/1‑150 (MQ=255)

        tGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGcgccgc                                                                                                                                               >  2:3296722/1‑150 (MQ=255)

        ggagggcgcgcCCCAGGACCGCGCCCGAGCCGTGAGTGCCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGcgccgc                                                                                                                                               <  1:4152323/143‑1 (MQ=255)

         gAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑GCGCCCGCCGGCGGcgcg                                                                                                                                              <  1:2440269/150‑1 (MQ=255)

          aGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCGGCGCCCGCCGGC‑GGCGCGGCGt                                                                                                                                             <  1:3199073/150‑1 (MQ=255)

          aGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGt                                                                                                                                             >  2:1358796/1‑150 (MQ=255)

          aGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGt                                                                                                                                             <  1:284536/150‑1 (MQ=255)

           ggTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTa                                                                                                                                            <  2:1261667/150‑1 (MQ=255)

             tAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGTGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTagc                                                                                                                                          >  2:2695708/1‑150 (MQ=255)

              aGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTagca                                                                                                                                         <  2:150613/150‑1 (MQ=255)

               gcgcACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTagcag                                                                                                                                        <  1:3417398/150‑1 (MQ=255)

                cgcACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAACCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTaccacc                                                                                                                                       <  1:1177988/150‑3 (MQ=255)

                    ccAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATcc                                                                                                                                   >  1:2563677/1‑150 (MQ=255)

                     cAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCa                                                                                                                                  >  2:3355087/1‑150 (MQ=255)

                     cAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCa                                                                                                                                  >  2:3219041/1‑150 (MQ=255)

                     cAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGGTGGGCACCGGTCTGGCCAAGGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCa                                                                                                                                  <  1:3464097/150‑1 (MQ=255)

                        tACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGcc                                                                                                                               >  1:2213592/1‑150 (MQ=255)

                           cTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCt                                                                                                                            >  1:1225773/1‑150 (MQ=255)

                            tCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGACTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTg                                                                                                                           <  1:1880567/150‑1 (MQ=255)

                             cGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTgg                                                                                                                          <  2:4172356/150‑1 (MQ=255)

                             cGACCGAGCAGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGCCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTgg                                                                                                                          <  1:1777816/150‑1 (MQ=255)

                                ccGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCGGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGa                                                                                                                       >  1:3129351/1‑150 (MQ=255)

                                        tgagtgaCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCa                                                                                                               <  2:1636107/150‑1 (MQ=255)

                                        tgagtgaCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCa                                                                                                               <  2:815335/150‑1 (MQ=255)

                                          agtgaCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACt                                                                                                             <  1:433322/150‑1 (MQ=255)

                                           gtgaCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTg                                                                                                            >  1:216100/1‑150 (MQ=255)

                                            tgaCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGt                                                                                                           <  1:1144694/150‑1 (MQ=255)

                                             gaCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTa                                                                                                          >  2:1569760/1‑150 (MQ=255)

                                              aCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTaa                                                                                                         >  2:970307/1‑150 (MQ=255)

                                              aCCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTaa                                                                                                         >  1:597699/1‑150 (MQ=255)

                                                cATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATc                                                                                                       >  2:877964/1‑150 (MQ=255)

                                                cATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATc                                                                                                       >  1:4067329/1‑150 (MQ=255)

                                                  tCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGc                                                                                                     >  1:1360792/1‑150 (MQ=255)

                                                  tCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGc                                                                                                     <  2:442580/150‑1 (MQ=255)

                                                       cGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCaaaa                                                                                                >  2:95409/1‑150 (MQ=255)

                                                         ttGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACg                                                                                              <  2:3529647/150‑1 (MQ=255)

                                                              cACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGGCAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCa                                                                                         >  2:2824835/1‑150 (MQ=255)

                                                              cACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCa                                                                                         >  1:995330/1‑150 (MQ=255)

                                                                ctgctCTGGGCCATTGGCCAGACCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATc                                                                                       >  2:1961643/5‑150 (MQ=255)

                                                                ccGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATc                                                                                       <  1:1267849/150‑1 (MQ=255)

                                                                 cGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATcc                                                                                      >  1:1007706/1‑150 (MQ=255)

                                                                      tGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTa                                                                                 >  1:3758758/1‑150 (MQ=255)

                                                                      tGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTa                                                                                 >  1:4489214/1‑150 (MQ=255)

                                                                         ccAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAACATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTg                                                                              >  2:3061254/1‑150 (MQ=255)

                                                                          cAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTCCTGc                                                                             >  2:3230663/1‑150 (MQ=255)

                                                                                         ggccaggccaGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACgggg                                                              <  2:4491944/150‑1 (MQ=255)

                                                                                          gccaggccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACggggg                                                             >  2:3077752/1‑150 (MQ=255)

                                                                                          gccaggccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACggggg                                                             >  2:2076880/1‑150 (MQ=255)

                                                                                          gccaggccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACggggg                                                             >  2:4345693/1‑150 (MQ=255)

                                                                                            caggccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGgcg                                                           >  1:3490357/1‑150 (MQ=255)

                                                                                             aggccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGgcgc                                                          <  1:1432494/150‑1 (MQ=255)

                                                                                              ggccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGcc                                                         <  2:4053071/150‑1 (MQ=255)

                                                                                              ggccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGcc                                                         >  1:656726/1‑150 (MQ=255)

                                                                                              ggccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGcc                                                         <  2:1749230/150‑1 (MQ=255)

                                                                                               gccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCa                                                        <  2:3096938/150‑1 (MQ=255)

                                                                                               gccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCa                                                        >  1:4244529/1‑150 (MQ=255)

                                                                                                ccagTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGACAg                                                       <  1:2143964/150‑1 (MQ=255)

                                                                                                  agTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGa                                                     >  2:2531447/1‑150 (MQ=255)

                                                                                                             tCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTgg                                          <  2:1096333/150‑1 (MQ=255)

                                                                                                             tCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTgg                                          >  1:2594677/1‑150 (MQ=255)

                                                                                                             tCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTgg                                          >  2:3874272/1‑150 (MQ=255)

                                                                                                             tCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTgg                                          >  2:41395/1‑150 (MQ=255)

                                                                                                              cGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGgc                                         <  2:3229693/150‑1 (MQ=255)

                                                                                                                 aCAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCgca                                      >  2:3612501/1‑150 (MQ=255)

                                                                                                                    gCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCgcagca                                   <  2:606839/150‑1 (MQ=255)

                                                                                                                    gCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCgcagca                                   <  2:607246/150‑1 (MQ=255)

                                                                                                                     cacaAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGcagcag                                  >  1:3865843/1‑150 (MQ=255)

                                                                                                                     cacaAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGcagcag                                  >  2:2253431/1‑150 (MQ=255)

                                                                                                                      ccacaGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGt                                 <  2:4374792/146‑1 (MQ=255)

                                                                                                                      acaAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGt                                 >  1:1045807/1‑150 (MQ=255)

                                                                                                                      acaAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGt                                 <  2:3710645/150‑1 (MQ=255)

                                                                                                                      acaAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGt                                 >  1:845443/1‑150 (MQ=255)

                                                                                                                        aaaGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTgg                               >  1:1539992/1‑150 (MQ=255)

                                                                                                                         aaGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGa                              <  2:2433716/150‑1 (MQ=255)

                                                                                                                          cgCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGAt                             <  1:30137/149‑1 (MQ=255)

                                                                                                                           gCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATc                            <  1:3648109/150‑1 (MQ=255)

                                                                                                                             cccGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGt                          <  1:1120226/150‑1 (MQ=255)

                                                                                                                              ccGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGtt                         >  2:301890/1‑150 (MQ=255)

                                                                                                                              ccGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGtt                         >  2:3728635/1‑150 (MQ=255)

                                                                                                                                  tCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCCGCATCCCGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCCGGGGCTCGGTgcgc                     >  2:1288159/1‑150 (MQ=255)

                                                                                                                                    tgctacgcg‑gcgcCCGCCGGCGGCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCgg                   >  1:3027704/6‑150 (MQ=255)

                                                                                                                                     gctacgcg‑gcgcCCGCCGGCGGCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGa                  >  2:3534702/5‑150 (MQ=255)

                                                                                                                                     aCGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGa                  >  2:3943713/1‑150 (MQ=255)

                                                                                                                                      cgccgcg‑ccgCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGaa                 <  1:1171041/150‑1 (MQ=255)

                                                                                                                                       tacgcg‑gcgcCCGCCGGCGGCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAat                >  2:2436825/3‑150 (MQ=255)

                                                                                                                                       gcggcgcccgccgGC‑GGCGCGGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAat                >  2:2631512/8‑150 (MQ=255)

                                                                                                                                       gccgcg‑ccgcCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAat                >  1:4131500/1‑150 (MQ=255)

                                                                                                                                       gccgcg‑ccgcCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAat                >  1:2312028/1‑150 (MQ=255)

                                                                                                                                        ccgcg‑ccgcCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAata               >  1:3713447/1‑150 (MQ=255)

                                                                                                                                          gcg‑gcgcCCGCCGGCGGCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATc             >  1:2946614/1‑150 (MQ=255)

                                                                                                                                          gcg‑gcgcCCGCCGGCGGCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATc             >  2:1646/1‑150 (MQ=255)

                                                                                                                                          gcg‑gcgcCCGCCGGCGGCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATc             >  1:743541/1‑150 (MQ=255)

                                                                                                                                            g‑ccgccGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGc           >  1:1864051/1‑150 (MQ=255)

                                                                                                                                                gccgGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTg        <  2:1198028/150‑1 (MQ=255)

                                                                                                                                                gccgGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTg        <  1:363281/150‑1 (MQ=255)

                                                                                                                                                gccgGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTg        <  1:105722/150‑1 (MQ=255)

                                                                                                                                                gccgGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACGGTAATCGCCAAAACGGCGCATCCAGCTACTGCCCCCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGACGATCGCCTg        >  2:3439073/1‑150 (MQ=255)

                                                                                                                                                gcccGCCGGCGGCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTg        <  1:1646/150‑1 (MQ=255)

                                                                                                                                                      gggcgCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTGCGTAGc  <  1:2824835/150‑1 (MQ=255)

TTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCAATGGCCCAGAGCAGGCCAGGCCAGTCGGCGTGGTCGGACAGCACAAAGCCCCGGTCCACGCCGCG‑CCGCCGGCGGGCGCCGCGTAGCAGCATCCAGCCGCTGGCGAAGGCATCACTGTAATCGCCAAAACGGCGCATCCAGCTACTGCCACCGGCTGACGGGGGCGCCAGGACCAGTGCCTGGCGCAGCAGTGGATCGTTGCGCGGAATATCGCCTGCGTAGC  >  NC_002947/1264484‑1264782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`