| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,275,093 | G→C | 5.5% | intergenic (‑284/+28) | PP_5462 ← / ← PP_5463 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,275,093 | 0 | G | C | 5.5% | 623.3 / 20.0 | 183 | intergenic (‑284/+28) | PP_5462/PP_5463 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (78/95); new base C (4/6); total (82/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.33e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
AGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGTTGTATCCAGCCTGTTCGTCT > NC_002947/1274944‑1275241 | aGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATg > 1:1931192/1‑150 (MQ=255)aGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCACGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAAAGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATg > 1:1931139/1‑150 (MQ=255) gTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATgg < 1:3308472/150‑1 (MQ=255) tGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGGGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATggg > 2:3864513/1‑150 (MQ=255) gCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATgggc < 2:4254019/150‑1 (MQ=255) gAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATgggcgg < 1:100416/150‑1 (MQ=255) gAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATgggcgg > 1:3227410/1‑150 (MQ=255) gAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATgggcgg < 1:100210/150‑1 (MQ=255) aTGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATgggcgggc < 2:1757375/150‑1 (MQ=255) ggCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTGCAATAAGGTGGGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGTGCAAAGCCCGCCGATGGGCGGGCTT‑c > 2:1631832/1‑150 (MQ=255) gCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCGAAGCCCGCCCATCGGCGGGCtttg < 2:3089530/150‑3 (MQ=255) gCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑Ca > 1:4383114/1‑150 (MQ=255) aTTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑gg > 2:3329815/1‑150 (MQ=255) tttGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑gggg < 1:734462/150‑1 (MQ=255) tttGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑gggg < 2:214888/150‑1 (MQ=255) tttGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑gggg > 1:3881193/1‑150 (MQ=255) ttGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCAGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑ggggg < 1:2183703/150‑1 (MQ=255) gTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑gggggggg > 1:2665872/1‑150 (MQ=255) tATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGCGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAg > 1:2399791/1‑150 (MQ=255) tCCGGCGGAGAGTTAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGaa < 1:3441302/150‑1 (MQ=255) tCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGaa > 1:568805/1‑150 (MQ=255) tCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGaa > 1:3500313/1‑150 (MQ=255) tCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGGGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCGT‑CA‑GGGGGGGGCCGaa > 2:4351065/1‑150 (MQ=255) gccGGCGGAGAGTGAATGTCGCAGCCTGCTTCCCGGGTACGTCGGCTCCAATACGGTGCGGGAGAGCGGTAATGAGGGGGGGGATGGTGGTAAAGGTGAACGGCGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGaa < 1:2881490/149‑1 (MQ=255) ccGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAg < 2:1810517/150‑1 (MQ=255) gtcggAGAGTGAATGTCTAAGCCTGCTTCCCGGTCACCTCGGCACCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAggg < 2:2397239/148‑1 (MQ=255) ggcggAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAggg < 2:658209/150‑1 (MQ=255) cggAGAGTGAATGTCGACGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCt < 1:2416472/150‑1 (MQ=255) cggAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCt < 2:2869892/150‑1 (MQ=255) ggAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTa < 2:3725946/150‑1 (MQ=255) gagaGTGACTGTCGAAGCCTGCTGCCCGGTTCCGTCGGCTCCAATACGGTGCGGGAGAGCGGTAAGGATGGGGGTGAGGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTAt < 1:3162451/150‑1 (MQ=255) agagTTAATGTCGAAGCCTGCTGCCCGGTTAGGTCGGCTCCAATAAGGTGCGGGAGCGCGGTAATGTTGGGGGTGTTGGTGGTAAAGGTGAAAGGAGAATGAGCAACGCCCGCCGTTGGGCGGGCTT‑CAGGGGGGGGGCAGAAGGGCTAt < 1:1643652/150‑1 (MQ=255) gagTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCg < 1:796913/150‑1 (MQ=255) gagTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCg > 1:1433791/1‑150 (MQ=255) tGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGtac > 2:2000942/1‑150 (MQ=255) gAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGtact > 1:1192483/1‑150 (MQ=255) gAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCGT‑CA‑GGGGGGGGCAGAAGGGCTATCGtact > 1:1192238/1‑150 (MQ=255) gAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGGGGTAAAGGTGAAAGGAGACTGAGCAAAGCCCGCCGATGGGCGGGCGT‑CA‑GGGGGGGGCAGAAGGGCGATCGtact > 1:4254373/1‑150 (MQ=255) aaTGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGtacta < 2:336202/150‑1 (MQ=255) cTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTtct < 1:460560/150‑1 (MQ=255) tgccccccGGTTACGTCGGCTCCAATAAGGGGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAAGGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTtctc < 1:1474876/145‑1 (MQ=255) tGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTtgtc > 1:190775/1‑150 (MQ=255) tGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTtctc < 2:3500313/150‑1 (MQ=255) ttCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAATGGCTATCGTACAACGGACGCTTCACGTc > 2:2612618/1‑150 (MQ=255) ttCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTCCGGTCGCGTctcctc > 1:2500076/1‑150 (MQ=255) ttCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTc > 1:2757985/1‑150 (MQ=255) ttCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTc > 1:98899/1‑150 (MQ=255) ttCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTATCGTc > 2:1632530/1‑150 (MQ=255) cccGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCa < 2:2588797/150‑1 (MQ=255) cGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCAcc < 1:1742768/150‑1 (MQ=255) cGGTGACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGCATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCAcc < 2:4003298/150‑1 (MQ=255) gTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGTTAAAGGTGAAAGGAGAATGAGCAAACCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAATGGCTATCGTACTACGGTCGCTTATCGTCCAACgc > 2:1455477/1‑149 (MQ=255) caCGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGaaa < 1:1552612/149‑1 (MQ=255) gcGGCTCCAAGACGGTGCGGGAGAGCGGTAAGGATGGGGGTGAGGGTGGTAAAGGTGAAAGGAGAATGAGCAACGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTa < 1:2744518/149‑1 (MQ=255) ggCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAgg > 2:884380/1‑150 (MQ=255) tCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAg > 2:2345579/1‑150 (MQ=255) tCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTATCGTCCACCGAAAGGTAGGAAg > 1:1316644/1‑150 (MQ=255) cAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAgg > 2:3608751/1‑104 (MQ=255) cAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAgg < 1:3608751/104‑1 (MQ=255) gTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCAcccgccc < 2:3018880/150‑1 (MQ=255) gCGGGAGAGCGGTAATGAGGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACccgcccgc < 1:508465/150‑1 (MQ=255) gggAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCAc > 1:3744565/1‑150 (MQ=255) gggAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCACTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCAc < 2:3167940/150‑1 (MQ=255) gagaGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCActc > 2:1583164/1‑150 (MQ=255) agagCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGACTGAGCACAGCCCGCCGATGGGCGGGCTTCCG‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCActc < 2:718338/150‑1 (MQ=255) gTACTGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGCTGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCtcatca < 1:3364970/150‑1 (MQ=255) gTAATGATGGGGGTGTTGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCtcatca < 1:2968373/150‑1 (MQ=255) gTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCtcatca < 1:2613314/150‑1 (MQ=255) gTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCtcatca > 2:4480189/1‑150 (MQ=255) atgGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATc < 1:2943656/150‑1 (MQ=255) atgGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATc < 2:3248295/150‑1 (MQ=255) aggggggTGATGGGGGTAAAGGTGAAAGGAGAATGAGCAACGCCCGCCGCTGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATc < 1:1364671/148‑1 (MQ=255) gggggTGATGGTGGTAAAGGTGAAAGGAGACTGAGCAAAGCCCGCCGAGGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGc < 1:3391740/150‑1 (MQ=255) gggTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCAc > 1:656220/1‑150 (MQ=255) ggtAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGa < 2:2433407/150‑1 (MQ=255) aaaGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTg > 2:533293/1‑150 (MQ=255) tGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCttt < 2:133671/150‑1 (MQ=255) tGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCttt < 1:4030390/150‑1 (MQ=255) gAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTg < 2:857883/150‑1 (MQ=255) ggAGAATGAGCAAAGCACGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCACGTCCACCGAAAGGTAGGAAGCACCCGCCCCCACTCCTCATCAGGAATCGCACGTTCAGGTGACTGCCGTTTGATa > 1:3283844/1‑150 (MQ=255) gagaATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATaa < 1:3592739/150‑1 (MQ=255) gagaATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATaa > 2:3668283/1‑150 (MQ=255) gaATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGTAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGt > 2:1510660/1‑150 (MQ=255) gaATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTGGGACGCACCCGCCCGCACTCCGCATCAGGACTCGCACTTTCAGGTGACTGCCTTTGGATGAGt > 2:3787452/1‑150 (MQ=255) gaATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGt < 2:2289998/150‑1 (MQ=255) aaTGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGtt > 2:3491227/1‑150 (MQ=255) aaTGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGtt < 2:2665872/150‑1 (MQ=255) aaTGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGtt < 2:946768/150‑1 (MQ=255) gAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGTTGTa < 1:902789/150‑1 (MQ=255) aGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCCCCCCCACACCTCATCAGGAATCGCACATTCAGGTGACTGCCTTTTGATAAGTTGTAt > 1:3035682/1‑150 (MQ=255) cAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATGAGTTGTATcc > 2:4042581/1‑150 (MQ=255) cAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGTTGTATcc > 2:3464502/1‑150 (MQ=255) aaGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGTTGTATCCAg < 2:4261823/150‑1 (MQ=255) aaGCCCGCCCATCGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACGTTCAGGTGACTGCCTTTGGCTAAGTTGTATCCAg > 2:211509/1‑150 (MQ=255) gcccgcccATCGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCa > 2:3924820/1‑118 (MQ=255) gcccgcccATCGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCa < 1:3924820/118‑1 (MQ=255) gcccgcccATCGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCa < 1:3924766/118‑1 (MQ=255) ccgccgATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGTTGTATCCAGCCTg > 1:3703841/1‑150 (MQ=255) gATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGTTGTATCCAGCCTGTTCGt < 1:2904070/150‑1 (MQ=255) tGGGCGGGCTT‑CA‑GGGGGGGGCAGCAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGCAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGTTGTATCCAGCCTGGTCGTCt < 2:2319383/150‑1 (MQ=255) | AGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGTTACGTCGGCTCCAATAAGGTGCGGGAGAGCGGTAATGATGGGGGTGATGGTGGTAAAGGTGAAAGGAGAATGAGCAAAGCCCGCCGATGGGCGGGCTT‑CA‑GGGGGGGGCAGAAGGGCTATCGTACTACGGTCGCTTCTCGTCCACCGAAAGGTAGGAAGCACCCGCCCGCACTCCTCATCAGGAATCGCACTTTCAGGTGACTGCCTTTGGATAAGTTGTATCCAGCCTGTTCGTCT > NC_002947/1274944‑1275241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |