Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,383,260 A→T 10.5% L16Q (CTG→CAG)  PP_1204 ← lipoprotein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,383,2600AT10.5% 471.3 / 36.3 201L16Q (CTG→CAG) PP_1204lipoprotein
Reads supporting (aligned to +/- strand):  ref base A (88/78);  new base T (5/18);  total (100/101)
Fisher's exact test for biased strand distribution p-value = 6.69e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.88e-01

Only 100 of 209 total aligned reads displayed.

GCACACGTCGCTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCTTGTACTCCA  >  NC_002947/1383111‑1383409
                                                                                                                                                     |                                                                                                                                                     
gcACACGTCGCTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGccca                                                                                                                                                       >  1:2493353/1‑150 (MQ=255)
gcACACGTCGCTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGcaca                                                                                                                                                       <  2:2627347/150‑1 (MQ=255)
    acGTCGCTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTgc                                                                                                                                                   >  2:3509682/1‑150 (MQ=255)
    acGTCGCTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTgc                                                                                                                                                   >  2:2095790/1‑150 (MQ=255)
     cGTCGCTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTgcg                                                                                                                                                  <  2:4413536/150‑1 (MQ=255)
         gCTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGgcgc                                                                                                                                              <  1:3148704/150‑1 (MQ=255)
          cTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACTGTGCGGCGcc                                                                                                                                             <  1:185010/150‑1 (MQ=255)
          cTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACTGTGCGGCGcc                                                                                                                                             <  1:4099972/150‑1 (MQ=255)
          cTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACTGTGCGGCGcc                                                                                                                                             <  2:2744748/150‑1 (MQ=255)
          cTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACTGTGCGGCGcc                                                                                                                                             <  1:688941/150‑1 (MQ=255)
           tGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACTGTGCGGCGccc                                                                                                                                            <  1:2533884/150‑1 (MQ=255)
                 aGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAgg                                                                                                                                      <  1:2997077/150‑1 (MQ=255)
                    tCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTa                                                                                                                                   >  2:1981693/1‑150 (MQ=255)
                    tCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTa                                                                                                                                   >  1:1104100/1‑150 (MQ=255)
                     ccATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGGGCTCCTCTGGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGCCGCGCTGGGCGCCGCACCGTGCGGCGCCCCCAAGGGTaa                                                                                                                                  <  2:2081828/150‑1 (MQ=255)
                      cATCCCCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTGGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTaaa                                                                                                                                 <  1:2941777/150‑1 (MQ=255)
                        tCACCTTGGGCTCGCCGACATCGATGTGCTGGGTTTGCTCGTGCTGTTTGCGCTCGACGCGCTCCTCTGGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGGTGACGTGCTGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAgg                                                                                                                               <  1:4005274/150‑1 (MQ=255)
                        tCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAgg                                                                                                                               >  2:3978245/1‑150 (MQ=255)
                             ttCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACtt                                                                                                                          >  2:868782/1‑150 (MQ=255)
                                ggCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGc                                                                                                                       <  2:3694451/150‑1 (MQ=255)
                                ggCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGc                                                                                                                       <  1:1870218/150‑1 (MQ=255)
                                       cGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTaaa                                                                                                                >  1:4214097/1‑148 (MQ=255)
                                        gACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACCGTGCGGCGCCCCCCACGGTAAATGTAATTCGCgtgttaat                                                                                                               >  1:1936047/1‑146 (MQ=255)
                                          cATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGa                                                                                                             <  2:4500496/150‑1 (MQ=255)
                                          cATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGa                                                                                                             <  2:4325596/150‑1 (MQ=255)
                                              gATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCCAGGGGAAAGGTACTTCGCGTGTACATGATCAc                                                                                                         >  1:2760401/1‑150 (MQ=255)
                                                tCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTc                                                                                                       <  2:3658829/150‑1 (MQ=255)
                                                  tGCTGGGTCTGCTCGTGCTGTTGGGGGTCGCGGCGCTCCTCATGGTGGCGGCGGTGGGCCATGTGGTGGGCGCCGCCGCTGACGAGCTGGGCGCCGCCCCGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGt                                                                                                     <  1:1684811/150‑1 (MQ=255)
                                                  tGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGt                                                                                                     <  2:1038643/150‑1 (MQ=255)
                                                  tGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGt                                                                                                     >  1:680954/1‑150 (MQ=255)
                                                      gggTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTAATTAGCTTGTACATGATCACACGTGCAt                                                                                                 >  1:160106/1‑150 (MQ=255)
                                                       gttATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGAACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCAtt                                                                                                <  1:4515646/148‑1 (MQ=255)
                                                       ggTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCAtt                                                                                                <  1:307622/150‑1 (MQ=255)
                                                        gtttGCTCGAGATTTTTGCGCTCGACGCGCTCCTCCTGGTCGCGGCGCTGGGACATGTGGTTGGCGCAGCCGCTGACGCGCTGGGCGCCGCACTGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTg                                                                                               <  1:387964/147‑1 (MQ=255)
                                                        gtctGCTCGACCATTTTGCGCCCGACGGGCTCCTCTTGGTCGCTGCGGTGGGACATGTGGTTGGCGCCGCCGCTGACGAGCAGGGCGCCGCACTGGGGGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTg                                                                                               <  1:765765/147‑1 (MQ=255)
                                                        gTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACTGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTg                                                                                               <  1:2565225/150‑1 (MQ=255)
                                                        gTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTg                                                                                               <  2:304479/150‑1 (MQ=255)
                                                          aTGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCCAGGGTAAAGGTACTTCGCTTGTACCTGATCACTCGTGCATTggg                                                                                             >  2:3202281/1‑149 (MQ=255)
                                                          aTGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGt                                                                                             <  2:531751/150‑1 (MQ=255)
                                                          aTGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGt                                                                                             <  2:3527783/150‑1 (MQ=255)
                                                             cTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCCAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTAt                                                                                          >  1:1871052/1‑150 (MQ=255)
                                                              tCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACCGTGCGGCGCCCCCCCGGGTAAAGGTACTTCGCTGGTACATGCTCACGCGTGCAGGGGGTATc                                                                                         >  2:1332455/1‑150 (MQ=255)
                                                                    tgTTTGCGCTCGACGCGCACCTCCTGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACCGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAgcggc                                                                                   <  1:72873/149‑1 (MQ=255)
                                                                    aGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAgcggc                                                                                   <  2:2523438/150‑1 (MQ=255)
                                                                     gTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAgcggcg                                                                                  >  1:4495081/1‑150 (MQ=255)
                                                                        tGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCCAGGGGGAAGGTACTTCGCGTGTAAATGGTCACTAGTTCATTGGTTATAAGCGGCGAAc                                                                               >  1:1662456/1‑150 (MQ=255)
                                                                         gcgcTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCGTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAAcg                                                                              >  2:3149386/1‑150 (MQ=255)
                                                                           gcTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTTCGGGGCCCCCAAGGGTAAATGTAATTAGCTTTTAAATTATAAAAAGTGGATTTGTTATAATCGGCGAAcgcg                                                                            >  1:4197256/1‑150 (MQ=255)
                                                                           gcTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAAcgcg                                                                            <  1:3510569/150‑1 (MQ=255)
                                                                           gcTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCCCCCCCCCGGGGAAAGGTACTTCGCGTGTACATGATCCCTCGTGCCGTGGTTATAAGCGGCGAAcgcg                                                                            >  1:4359086/1‑150 (MQ=255)
                                                                            gtcgtggcgcTCCTAATGGTCGCTGCGCTGGGACTTGTGTTTGGGGCAGCCGAGGACGTGCTGGGCGCCGCACAGTGGGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCgg                                                                           <  1:3094649/144‑1 (MQ=255)
                                                                            cTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCgg                                                                           <  2:617588/150‑1 (MQ=255)
                                                                             tCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACCCTGCGGCGCCCCCAAGGGTAAAGGTAATTCGCGTGTACATGATAACTCGTGCATTGGTTATAAGCGGCGAACGCggg                                                                          >  1:2044599/1‑150 (MQ=255)
                                                                              cGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGc                                                                         <  1:2212767/150‑1 (MQ=255)
                                                                                  gcgcTCCTCATGGTCGCTGCGCTGTGAAATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGc                                                                     <  1:2354960/150‑1 (MQ=255)
                                                                                  gcgcTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACCGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGGAGTGGTTATCAGCGGCGAACGCGGGCCTGc                                                                     >  1:2092391/1‑150 (MQ=255)
                                                                                  gcgcTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCCTTGGTTATCAGCGGCGAACGCGGGCCTGc                                                                     >  1:3649075/1‑150 (MQ=255)
                                                                                   cgcTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCa                                                                    <  2:2687636/150‑1 (MQ=255)
                                                                                       cctcATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGGAAATGTACTTCGCTTGTAAATGATAACACGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGaa                                                                >  1:3429203/1‑150 (MQ=255)
                                                                                       cctcATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACACTGCGGCGCCCCCAAGGGGAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGGTATCAGCGGCGCACGCGGGCCGGCAggcc                                                                >  1:2460945/1‑148 (MQ=255)
                                                                                         tcATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACCGTGCGGCGCCCCCACGGGGAAAGGTACTTCGCGTGTACATGATCACTCGTGCATTGGGTATCAGCGGCGAACGCGGGCCTGCAGGACgg                                                              >  2:1363329/1‑150 (MQ=255)
                                                                                         tcATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGTGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAgg                                                              >  2:1780611/1‑150 (MQ=255)
                                                                                         tcATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAgg                                                              >  2:1205940/1‑150 (MQ=255)
                                                                                         tcATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGGTATCAGCGGCGAACGCGGGCCTGCAGGAAgg                                                              >  2:1691346/1‑150 (MQ=255)
                                                                                          cATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCCGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGt                                                             <  1:2666633/150‑1 (MQ=255)
                                                                                           aTGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTc                                                            <  2:1404743/150‑1 (MQ=255)
                                                                                           aTGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTc                                                            <  2:2190866/150‑1 (MQ=255)
                                                                                            tGGTCGCTGCGCTGGGACATGTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGGAAAGGTACTTGGCTTGTACATGATGACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCa                                                           >  2:601508/1‑150 (MQ=255)
                                                                                            tGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCa                                                           <  1:1629555/150‑1 (MQ=255)
                                                                                            tGGTCGCTGCGCTGGGACATCTGGTTGCCGCACCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCa                                                           <  1:3926622/150‑1 (MQ=255)
                                                                                             ggTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAg                                                          >  1:1459910/1‑150 (MQ=255)
                                                                                                   tgcgctgGGACCTCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTc                                                    <  2:3411594/150‑1 (MQ=255)
                                                                                                   tgcgctgGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCCCCGTGCGGCGCCCCCCAGGGGGAAGGTACATCGCGTGTTCATGATCACTCCTGCATGGGTTATCAGCGGCGAACGCGGGCCGGCAGGAACGTCAGCAcagc                                                    >  1:244225/1‑147 (MQ=255)
                                                                                                     gggtgGGACATGTGGTTGGCGCAGCCGGTGACGAGCAGGGCGCCGCACTGTGGGGCGCCCCCAAGGGTAAAGTTACTTCGCTTGTACATGATCACTCGTGCATTGTTTATCAGCGGCTAACGCGGGCATGCAGGAAGGTCAGCACTTCAt                                                  <  2:2158448/147‑1 (MQ=255)
                                                                                                      gctgGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCAtt                                                 <  2:4180819/150‑1 (MQ=255)
                                                                                                        tgGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTgc                                               >  2:696994/1‑149 (MQ=255)
                                                                                                          ggACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGc                                             <  2:3823976/150‑1 (MQ=255)
                                                                                                                 tGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACg                                      >  2:4251088/1‑150 (MQ=255)
                                                                                                                    ttGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCCAGGGTAAAGGTACTTAGCGTGTACATGATCACTCGGGCAGTGGTTATCAGCGGCGAACGCGGGCCGGCAGGAAGGTCAGCACGTCATTGAGCGGCAACGccg                                   >  2:158197/1‑149 (MQ=255)
                                                                                                                     tGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTg                                  <  2:495310/150‑1 (MQ=255)
                                                                                                                     tGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTg                                  <  2:4079971/150‑1 (MQ=255)
                                                                                                                      ggCGCAGCCGCTGACGAGCTGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTgg                                 <  1:3225110/150‑1 (MQ=255)
                                                                                                                           aGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTc                            <  2:890067/150‑1 (MQ=255)
                                                                                                                              cGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACATCATTGAGCGGCAACGCCTGGGCGTCCTg                         >  2:2868750/1‑150 (MQ=255)
                                                                                                                                    cGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTcggt                   <  1:1696766/150‑1 (MQ=255)
                                                                                                                                          gggCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTcggtgcggtg             <  2:4034770/150‑1 (MQ=255)
                                                                                                                                           ggCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCggtgcggtgc            >  2:2861486/1‑150 (MQ=255)
                                                                                                                                           ggCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCggtgcggtgc            >  2:2073049/1‑150 (MQ=255)
                                                                                                                                           ggCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCggtgcggtgc            <  1:3680904/150‑1 (MQ=255)
                                                                                                                                           ggCGCCGCACAGTGCGGCGCCCCCAAGCGTAAAGGTACTTCGCTTGAACATGATCACCCGAGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCggtgcggtgc            <  1:3183799/150‑1 (MQ=255)
                                                                                                                                            gcgcCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTgg                                                                                              >  1:2162104/1‑67 (MQ=255)
                                                                                                                                             cgccgcACTGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCtt          >  1:2963620/1‑150 (MQ=255)
                                                                                                                                             cgccgcACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCtt          <  2:2930975/150‑1 (MQ=255)
                                                                                                                                              gccgcACTGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCTTg         <  1:997139/150‑1 (MQ=255)
                                                                                                                                              gccgcACAGTGCGGCGCCCCCCAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCTTg         <  1:517590/150‑1 (MQ=255)
                                                                                                                                                cgcACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTTCATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCTTGTa       >  2:2027083/1‑150 (MQ=255)
                                                                                                                                                cgcACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCTTGTa       >  2:2407196/1‑150 (MQ=255)
                                                                                                                                                cgcACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCTTGTa       <  2:3435955/150‑1 (MQ=255)
                                                                                                                                                 gcACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCTTGTAc      <  2:2293334/150‑1 (MQ=255)
                                                                                                                                                  cacaGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCTTGTACt     >  1:3357102/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GCACACGTCGCTGCGGAAGCTCCATCACCTTCGGCTCGCCGACATCGATCTGCAGGGTATGCTCGAGCAGTTTGCGCTCGACGCGCTCCTCATGGTCGCTGCGCTGGGACATCTGGTTGGCGCAGCCGCTGACGAGCAGGGCGCCGCACAGTGCGGCGCCCCCAAGGGTAAAGGTACTTCGCTTGTACATGATCACTCGTGCATTGGTTATCAGCGGCGAACGCGGGCCTGCAGGAAGGTCAGCACTTCATTGAGCGGCAACGCCTGGGCGTCCTGCTCGGTGCGGTGCTTGTACTCCA  >  NC_002947/1383111‑1383409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑