| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,392,923 | A→G | 15.9% | intergenic (+87/‑99) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,392,923 | 0 | A | G | 15.9% | 340.5 / 47.7 | 133 | intergenic (+87/‑99) | PP_1214/ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Reads supporting (aligned to +/- strand): ref base A (48/61); new base G (8/13); total (56/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.81e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
TGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGC > NC_002947/1392778‑1393072 | tGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGcc < 1:989890/150‑1 (MQ=255) gCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGcc > 1:1354501/1‑149 (MQ=255) gCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGcc < 2:1354501/149‑1 (MQ=255) gCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACACGGATGACGcc‑c > 2:2391258/1‑150 (MQ=255) aGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CAt < 1:4328799/150‑1 (MQ=255) gAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CAtt < 2:4096019/150‑1 (MQ=255) gTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCaa < 1:3972500/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCaaa < 1:1756759/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCaaa < 2:3778592/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCCCTCCAACAGGTATTAAGCC‑CCATTCaaa > 2:2650945/1‑150 (MQ=255) cTATTCCAATGCCCAGCTTGCCGCCGAGAACTAGGAAAACCTCCGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGAGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GTGTAAA‑CCCGCTCCTACAGGTAGTACGCC‑CCTTTCAAAt < 1:1634907/150‑1 (MQ=255) tATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAAtg < 2:1439770/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAAtgtg < 1:3560335/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAAtgtg < 1:4190189/150‑1 (MQ=255) gtCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCTTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAAtgtg < 1:3418252/149‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATgtggt < 2:896129/150‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATgtggt < 1:1585910/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATgtggtg < 2:1885807/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATgtggtg < 2:124268/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATgtggtg < 2:4363537/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCGAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATgtggtg < 2:124308/150‑1 (MQ=255) cccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTa > 2:3832984/1‑150 (MQ=255) ccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTAc < 2:2368662/150‑1 (MQ=255) aGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCt < 2:2217255/150‑1 (MQ=255) gATTTCCGACGATATCATGGAAAACCTCGGCTAAGGTTATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTg < 1:500561/150‑1 (MQ=255) gATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTg < 1:2998880/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 2:185507/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGTTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:1103546/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 2:3786896/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:3281105/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:3211052/150‑1 (MQ=255) tCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAgg < 1:1916230/150‑1 (MQ=18) tCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAgg < 1:1916310/150‑1 (MQ=18) tCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAgg < 1:2755680/150‑1 (MQ=18) tCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAgg < 1:739310/150‑1 (MQ=18) ccGACGAGATCATGGAAACCCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGCGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGa < 1:285505/150‑1 (MQ=17) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGa < 1:361716/150‑1 (MQ=255) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGa < 1:2618769/150‑1 (MQ=255) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGc < 1:4128711/150‑1 (MQ=255) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGc < 2:3642651/150‑1 (MQ=255) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGc < 1:973625/150‑1 (MQ=255) acgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑g < 2:303805/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑gg < 1:2074801/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑gg < 2:4160555/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑gg < 1:372107/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑gg < 1:372196/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGCGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGC‑gg < 2:3769324/150‑1 (MQ=17) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGCTAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTCCAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑ggg < 2:4005132/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑ggg < 2:3629026/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑ggg < 2:4002427/150‑1 (MQ=255) agaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGC‑GGGt < 2:4355879/150‑1 (MQ=18) gaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCCCGCCAACACGTATTAAGCC‑CCAATAAAAAGTGGTGCAGGACCGGGAGGGGC‑ggggt > 2:1907814/1‑148 (MQ=255) aTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGATTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGttt < 1:2024226/150‑1 (MQ=255) cATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTAc < 1:490568/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CAATTGAAATGTTGTGGCGTACCTGTAGGAGC‑GGGTTTAcc > 2:2667504/1‑150 (MQ=38) ggAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTTAA‑ACCCCGCCGACAGGGATTAAGCC‑CATTTGAAATGTGGGGGAGTAACGGTGTGAGCGGGGTTTAccg > 2:1554695/1‑149 (MQ=255) ggAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGC‑GGGTTTACCcg < 1:3052465/150‑1 (MQ=17) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCcgc < 1:2732012/150‑1 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGC‑GGGTTTACCcgc < 2:3196375/150‑1 (MQ=17) ccTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑ACCGCGCCAACAGGTATTACGCC‑CATTTCAAATGTGGGGCAGTACCGGTAGGAGC‑GGGTTTACCCGCGAAAg > 2:711280/1‑150 (MQ=38) tCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCCCAACAACAGGTATTACGCC‑CCATTCAAATGGGGTGCCGTACCGGTAGGGGC‑GGGTTGAACCGCGCAAggg > 2:172372/1‑150 (MQ=255) cGGCTAAGGTGATTGGCCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTCCGC‑GGGTAAA‑CCCGCTCCTACTGGTATTCCGCC‑CATTTCAACTGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGc < 2:3850003/150‑1 (MQ=37) gCTATGGTGATTGGGAATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCGGTGCGGGCCCTTTCGC‑GGGTAAC‑CCCGCTCCTACAGGTATTACGCC‑AATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGTTTTACCCGCGAAAGGGCCg < 2:2154507/150‑1 (MQ=37) gCTAAGGTGATTTGGCAGTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGGTAAA‑CCC‑CACCGACCGGGATTAAGCC‑CCATTCAAATGTGGTGCGCTACCGGGTGGAGG‑GGGGTTGCCCCCGACAAGGCCg > 2:3779046/1‑150 (MQ=255) tttGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGGAAA‑CCCCCGCCTACAGGTATTAAGCC‑CAATTCAAATGTGGTGCAGTTCCTGTTGGGGC‑GGGGTTACCCGCGGAACGGGCGGGGCCGGTTg > 2:1948853/1‑150 (MQ=255) tgCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑ACCGCTACAACAGGTATTAAGCC‑CATTTAAAATGTTGTGGAGTACATGTAGGAGC‑GGGTTTAACCGCGAAAGGGCCGGCGCAGGTTGTAGAGATTcaaa > 2:238531/1‑148 (MQ=25) ccAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg > 2:291253/1‑100 (MQ=255) ccAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:291253/100‑1 (MQ=255) aaCTCTGTGCGTTGGATAGCGCGTGGGCCGCCCTTTTCG‑‑GGTTAAACCCCCCCCCCCCTGGTTTGCCGCC‑ATTTTCAATTTTGGTGCTGTACCGTTAGGTGG‑GGTTTGCCCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCAttt < 2:3223686/150‑1 (MQ=255) tGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTGAA‑AACCCGCCAACACGTAGTACGCC‑CCATTCAAAGGTGGTGGCGTACCGGTTGGGGC‑GGGGGTTCCCCCGCAAGGGCCCGCGCCGGGTGTTGAGGTGGAACCttttttgg > 2:843466/1‑148 (MQ=255) gTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑ACCGCGCCTAAACGGCTTAAGCC‑CAGTTAAAATGTGGTGCCGGACCGGTAGGAGC‑GGGTTTAACCGCGCAAGGGCCGGCGCGGGGTGGAGAGATGCCTGATTTTTTCGACggg > 2:3095040/1‑150 (MQ=255) tgtgCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑gg > 1:508792/1‑81 (MQ=255) tgtgCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑gg < 2:508792/81‑1 (MQ=255) cGGCCCTTTCGG‑GGCAAAA‑CCCGCACCTCCTGTTATTACCCC‑CTTTTCACTTGTGGTGCCTAACCTTTCGGCGG‑GGTTTAACCCGCGAACGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCt < 2:1990483/150‑1 (MQ=255) cTTTCGC‑GGGTAAA‑ACCGCTCCTACAGGTATTAAGCC‑CCTTTCAAATGTGGTGCAGTACCTGTATGAGC‑GGGTTTAACCGCGAAAGGGCCGGCGCAGTTTTTAGAGATGCAACAATTTTTATAAGGGCTTTATTAATCTGATTCTATGTa > 2:2073681/1‑150 (MQ=255) cTTTCGC‑GGGTAAA‑ACCGCTCCTACAGGTATTAAGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTAACCGCGAAAGGGCCGGCGCAGTTTGTATAGATGCATCAATTTTTCGACGGGCTTTATTACTATGATTCTAGGTa > 2:3124403/1‑150 (MQ=37) tttCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGGTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTAt > 2:2789321/1‑150 (MQ=255) tCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCCGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCg > 2:266095/1‑150 (MQ=255) gc‑gGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTAACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGAc > 2:364614/1‑150 (MQ=255) taaaa‑CCCGCTCCTACTGTTATTACGCC‑AATTTCAATTGTGGTGCTGTACCTGTTGGTGG‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCg < 2:2218242/148‑1 (MQ=255) tAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCgg > 1:4235469/1‑150 (MQ=255) ccccGCGCCGACAGGTATTCCGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGG‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTc < 2:2625821/149‑1 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CATTTCACATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGGTTGTAGAGATGCATCATTTTTTCGACGGGCGTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:3996063/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:3331845/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:3061460/1‑150 (MQ=255) ccGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:4409362/1‑150 (MQ=255) gCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCgcgc > 2:478922/1‑150 (MQ=18) gCTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCgcgc > 2:1620178/1‑150 (MQ=18) cTCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCa > 1:3821816/1‑150 (MQ=18) tCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGa > 2:322888/1‑48 (MQ=255) tCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTGTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGGATCGACCCCGGCTCGCGCAt > 1:2026848/1‑150 (MQ=18) tCCTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCACAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAt > 2:4261762/1‑150 (MQ=18) ccTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATc > 1:3565190/1‑150 (MQ=255) cTACAGGTACTGCACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTCGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 1:1897715/1‑150 (MQ=18) tACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGGAGAGATGCATCATTTTTTCGACGGGCGTTATGACTCTGAGTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:4124303/1‑150 (MQ=255) aGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 1:2995928/1‑150 (MQ=255) ggTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGc > 1:1038516/1‑150 (MQ=255) gTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 1:2511448/1‑150 (MQ=255) gTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 2:1488795/1‑150 (MQ=255) aCGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGc > 1:241693/1‑150 (MQ=255) | TGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGC‑GGGTAAA‑CCCGCTCCTACAGGTATTACGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGC > NC_002947/1392778‑1393072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |