| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,464,198 | T→G | 9.9% | Q476P (CAG→CCG) | algX ← | alginate biosynthesis protein AlgX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,464,198 | 0 | T | G | 9.9% | 382.1 / 3.6 | 163 | Q476P (CAG→CCG) | algX | alginate biosynthesis protein AlgX |
| Reads supporting (aligned to +/- strand): ref base T (71/69); new base G (2/19); total (75/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.94e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 176 total aligned reads displayed.
TCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGG > NC_002947/1464049‑1464347 | tCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGgcctgcct > 2:2713457/1‑150 (MQ=255) aCCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCctgcctgc > 1:3000474/1‑150 (MQ=255) aCCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCctgcctgc > 1:2101685/1‑150 (MQ=255) ccGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTgcg > 1:3700895/1‑150 (MQ=255) cGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTgcgc < 1:99810/150‑1 (MQ=255) cGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTgcgc < 2:422295/150‑1 (MQ=255) cGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCGGCCTgcgc < 2:422178/150‑1 (MQ=255) ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCt > 1:2247333/1‑150 (MQ=255) gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTgc > 1:1360342/1‑150 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGTGCGGTCTGCGCa < 1:3129185/150‑1 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg < 1:1194633/150‑1 (MQ=255) tttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGACATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAgg > 2:1630000/1‑150 (MQ=255) tttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAgg < 1:2356818/150‑1 (MQ=255) tttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAgg > 2:1632891/1‑150 (MQ=255) ttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGc > 1:3079871/1‑150 (MQ=255) ttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGc > 1:3494000/1‑150 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCa < 1:2401628/150‑1 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCa < 1:3615222/150‑1 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag < 2:3958398/150‑2 (MQ=255) cGAGCCCCTGGGAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag < 1:3253246/150‑2 (MQ=255) gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACg > 2:4512365/1‑150 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAATGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACgg < 2:2203089/150‑1 (MQ=255) tCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACCAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCaggcc < 2:4273746/150‑5 (MQ=255) tCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGc > 1:1608796/1‑150 (MQ=255) cccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGa > 2:256236/1‑150 (MQ=255) ccTGTTAGTAAACCTGCGGCGGTACCATCTCGGCGTGCGCGTCAACACCAAAAAATTCAAAC‑GCGATCAGGGAGGTGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGACTCACTGGCCTGCATGAGCGGTCTGCTCAGTCACGGCGaa > 2:772830/1‑150 (MQ=255) ccTGGTAGTACCCCTGGGGCGGTACCAGCGCGGGGTGCGCGGCCCCACCAAACACGGCCACC‑GCGAGCAGGGGGGGGCTGTAATTTGGTTTGAAACGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGGGGTCTGCGCAGGCACGGCGaa < 2:2787562/150‑1 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 2:1830361/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 2:1871423/1‑150 (MQ=255) cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAg > 2:1235621/1‑150 (MQ=255) cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAg > 2:2304494/1‑150 (MQ=255) tgtaACCCTGCGGGGGTACCTGCGCGGGGTGCGCGGCACCACCAAACCCGGCCACC‑GCGGGCTGGGGGGGGCTGTAAATGGGTTTGAAATGGGTCTTGGGTCGCCACCGGGGCGGGCCTGCGGGGTCTGCGCAGGCACGGCGAAgttgtt < 2:3194711/149‑1 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGACATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 2:3462516/1‑150 (MQ=255) cTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTGGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTg > 1:2332733/1‑150 (MQ=255) gcggcgGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACGGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCa < 2:3343746/150‑1 (MQ=255) gcggcgGAACCAGCGCGGCGTGCCCGCCACAACAAAACACCCCAAAC‑CCCAGCAGGGCGGGGATGAAAATTCTTTTAAAAAGGCTCATGGGACCCAAAACTGCCCCGCCTGCGCGCTCTCCCAAGCCACGGCGAAGTTGTTGCGTTTGCa < 2:905644/150‑1 (MQ=255) gTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCtt > 2:2322716/1‑150 (MQ=255) cAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCt > 1:788308/1‑150 (MQ=255) cgcgcGGGGTGCGCGGCACCACCAAACATGGCAAAC‑GGGTGCTGGGGGGGGCTGGAATTTCTTTTGAATTGGGTCTTGGGTCGCCCCACGGGCCTGCCTGCGGGGCCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCtt < 1:2558693/149‑1 (MQ=255) cgcgGCGTGCGCGGCACCACCAAACACGCCCAAC‑GCGAGCTGGGGGGGGGTGGAAATTCGTTTGAACTGGGTATGGGGGCGCCTCACGGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCg < 1:3731448/150‑1 (MQ=255) gcggcgTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGa > 2:663048/1‑150 (MQ=255) tGCGCGGCCCCACCAAACACGGCCACC‑GCGAGCCGGGGGGGGCTGTAATTTCTTTTGAAACGGGTCTTGGGTCGCCTCACGGGCCGGCCTGCGCGGTGTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 2:1501144/150‑1 (MQ=255) tGCGCGGCACCACCAAACACGGCAAAC‑GCGAGCAGGGCGGGGCTGTAAATTCTTTTGAACAGGGTCATGGGTCGCCTCACTGGCCGGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 2:3695201/150‑1 (MQ=255) gcgcGGCACCACCAAACAAGGCAAAC‑GCGTGCCGGGGGGGGCTGTAATTTCTTTTTAAAAGGGTCTTGGGTCGCCTCACTGGCCGGCCTGGGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 2:497539/150‑1 (MQ=255) cgcgGCCCCACAAAACACGGCAAAC‑GCGCGCCGGGGGGGGCTGTAATGTCTTTTCAAACGGGTCTTGGGTCGCCCCACTGGCCGGCCTGCGCGGTGTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg < 2:2454007/150‑1 (MQ=255) gCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTTAAAAGGGTCAGGGGTCGCCTAAGTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGc < 2:3755701/150‑1 (MQ=255) caccacCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGGGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGcc > 1:531921/1‑150 (MQ=255) caccaAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCt > 2:1765870/1‑150 (MQ=255) caccaAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCGTGGCTTCGACCTTCTGGGTGCCGCt > 1:1545808/1‑150 (MQ=255) ccaAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCttt > 2:4028031/1‑150 (MQ=255) ccaAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCGTCGACCGTCTGGGTGCCGCttt > 1:746183/1‑150 (MQ=255) ccaAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTGTGAAAAGGGTCAGGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCCGGCACGGCGCAGTTGTTGCGTTTGCAGAGCGTGGCTTCGACCTTCTGGGTGCCGCttt > 2:4397721/1‑150 (MQ=255) aaaCATGGCCACC‑GCGAGCCGGGGGGGGCTGTAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc < 2:2803388/150‑1 (MQ=255) aaaCACGGCCACC‑GCGTGCTGGGGGGGGCTGTAACTTGTTTTTAAATGGGTATTGGGTCGCCTCAGTGGCCTGCGTGCGGGGTGTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc < 1:376446/150‑1 (MQ=255) aaaCAAGCCAAAC‑GCGAGCCGGGCGGGGCTGTAAATTCTTTTTAAAAGGGTAATGGGTCGCCTCACTGGCCTGCCTGCGCTTTCTGCTCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc < 1:674170/150‑1 (MQ=255) aCAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCgg > 2:603211/1‑150 (MQ=255) aaGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGcc > 2:3339723/1‑150 (MQ=255) cggCCACG‑GCGAGCTGGGGGGGGGTGTAATTTGTTTTTAAATGGGTCTTGGGTCGCCTCAGGGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:2553448/149‑1 (MQ=255) cggCCACC‑GCGAGCTGGGGGGGGCTGTAATTTGTTTTTAACTGGGTATTGGGTCGCCTCAGTGGCCTGCCTGGGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 2:4287782/149‑1 (MQ=255) cgCCAACGGCGCGCCGGGGGGGGCTGTATATTTTTTTTAATTGGTTCTGGGGTCGCCAAAGTGGCCTGGCGGGGGGGTGTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:2050853/149‑1 (MQ=255) gCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTACGGCCCCt > 1:4276181/1‑150 (MQ=255) aaC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTa > 2:3782199/1‑150 (MQ=255) c‑gcgAGCTGGGGGGGGCTGGAAATTCGTTTGAAATGGGTCTTGGGTCGCCCCACTGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccccagaagg < 2:3836391/150‑7 (MQ=255) cgcgcgggggggggTTGTAATTTGTTTTCAAATGGGTCTTGGGTCGCCTCAGTGGCCTGCCTGGGGGGTCTGCGCTGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 1:3241886/144‑1 (MQ=255) cgcgccgggcggggcgGTAAATTCGTTTGAAAAGGGTCTGGGGTCGCCTCACTGGCCGGCCGGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 2:2389016/144‑1 (MQ=255) cgAGCAGGGCGGGGCTGGAAATTCGTTTGAAACGGGTCTTGGGTCGCCTCACTGGCCGGCCTGCGCGTTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 2:2195428/150‑1 (MQ=255) cgAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTTCAGAGCTTGGCTTCGACCTTCTTGGTTCCGCTTTACGGCCCCTGTACCTc > 1:2855095/1‑150 (MQ=255) gccggggggggCTGCAATTTCTTTTGAAATGGGTCTTGGGTCGCCTCACTGGCCGGCGGGGGGGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGaa < 2:2413359/147‑1 (MQ=255) gCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGaa > 1:4113326/1‑150 (MQ=255) ggggggGTGTAATTTCGTTTGAAAGGGGTCTGGGGGGGCCGCTGGGGCGGGCGGGGGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 1:4307726/148‑1 (MQ=255) gCGGGCCAGCAAATACGTTTCAAACGGGACATGGGCCGCCCCACTGGCCTGCCGGGGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 1:270610/150‑1 (MQ=255) ggggCTGCAATTTTTTTTTAAATGGGCCTGGGGCCGCCCCCCGGGCCGGCGGGGGCGGGCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGc < 1:1235621/150‑1 (MQ=255) cTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAACTTGTTGCGTTTGCAGAGCTTTGCTTAGACCATCATGGTGCCGCATTACGGCCCCAGTACCTACAACCCGAGCAGgc > 1:1919273/1‑150 (MQ=255) ttaatttCGTTTGAAACGGGACATGGGTCGCCTACCTGGCCTGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGgcgc < 2:2279695/145‑1 (MQ=255) aaTTCTTTTGAAACGGGTCATGGGCCGCCTCACGGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctgg < 2:3085600/150‑1 (MQ=255) ttCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggct > 2:3288307/1‑150 (MQ=255) gTTTGAAACGGGACTGGGGTCGCCTCCCGGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTGGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAATGCGAGCAGGCGCtggctggc < 2:2509690/150‑1 (MQ=255) tgtGAAACGGGCCCGGGGGCGCCGCCCGGGCCGGCCGGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc < 2:1070356/148‑1 (MQ=255) ttGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGccc > 1:4510478/1‑150 (MQ=255) aatgggTCTGGGGGCGCCTCCGGGGCCGGCCGGCGGGGCGGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTc < 1:1919742/147‑1 (MQ=255) ggggctggggTCGCCTCACGGGCCTGGGGGGGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 1:3462516/143‑1 (MQ=255) gggTCTTGGGGCGCCTCACTGGCCTGCCTGCGCGGCCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 2:1195529/150‑1 (MQ=255) gggTCTGGGGGCGCCTCCGGGGCCGGCCGGGGGGGGCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 1:2489953/150‑1 (MQ=255) gTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt > 1:1017259/1‑150 (MQ=255) gTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt > 1:1017238/1‑150 (MQ=255) ggggTCGCCTCCCGGGCCTGCCTGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCGTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTc < 2:2101685/149‑1 (MQ=255) ggTCGCCTCCCTGGCCGGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgc < 2:1963379/150‑1 (MQ=255) ggTCGCCTCACTGGCCTGCCGGCGCGGACTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgc < 2:4237929/150‑1 (MQ=255) tCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCgcgc > 2:2752921/1‑150 (MQ=255) tCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCgcgc > 2:2752860/1‑150 (MQ=255) acgggCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGa < 2:4358569/147‑1 (MQ=255) aCTGGCCGGCCTGCGCGTTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGa < 2:1981439/150‑1 (MQ=255) cTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 2:1845961/150‑1 (MQ=255) tGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAg > 2:3543571/1‑150 (MQ=255) gccgtgcctgcGCAGACCGCGCAGGCA‑GGCGAAGTTGTTGCGTTTGCAGAGCGTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCAGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCACCGCTTCGCGCATATGGAAGAc > 2:3318436/5‑150 (MQ=255) tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGaa > 2:1190253/1‑150 (MQ=255) tgcctgcGCAGACCGCGCAGGCAGGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGaa > 2:1402435/1‑150 (MQ=255) cctgcGCAGACCGCGCAGGCAGGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGc > 2:3024454/1‑150 (MQ=255) ctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCg < 2:3617861/150‑1 (MQ=255) tgcGCAGACCGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCgg > 2:2956137/1‑150 (MQ=255) | TCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGG > NC_002947/1464049‑1464347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |