| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,464,205 | T→A | 10.4% | T474S (ACC→TCC) ‡ | algX ← | alginate biosynthesis protein AlgX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,464,205 | 0 | T | A | 10.4% | 356.0 / 28.4 | 166 | T474S (ACC→TCC) ‡ | algX | alginate biosynthesis protein AlgX |
| Reads supporting (aligned to +/- strand): ref base T (74/66); new base A (5/10); total (81/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-02 | |||||||||||
Only 100 of 168 total aligned reads displayed.
TCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGG > NC_002947/1464056‑1464354 | tCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGt < 1:1304414/150‑1 (MQ=255) ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCt < 2:4283214/150‑1 (MQ=255) ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCt > 2:1903009/1‑150 (MQ=255) gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTgc > 2:3672130/1‑150 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGTGCGGTCTGCGCa < 1:3129185/150‑1 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCa > 1:3704092/1‑150 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg > 1:28857/1‑150 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg < 1:1194633/150‑1 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg < 1:2440636/150‑1 (MQ=255) tttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAgg > 2:1632410/1‑150 (MQ=255) tttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAgg < 1:2356818/150‑1 (MQ=255) tttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAgg > 2:1632891/1‑150 (MQ=255) ttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGc > 1:3494000/1‑150 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCa < 1:3615222/150‑1 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag < 2:3958398/150‑2 (MQ=255) cGAGCCCCTGGGAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag < 1:3253246/150‑2 (MQ=255) gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACg > 2:4512365/1‑150 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAATGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACgg < 2:2203089/150‑1 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCACCGCGCGCAGGGGGGGGCTGGAAATTCTTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACgg < 2:2203083/150‑1 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACgg > 2:3387337/1‑150 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACgg > 2:3198123/1‑150 (MQ=255) tCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGc > 1:2282346/1‑150 (MQ=255) cccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGa > 2:256236/1‑150 (MQ=255) cccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATGCGTTGGAAATGGGTGATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCGGCGCAGGCACGGCgc > 2:2822098/1‑149 (MQ=255) ccTGTTAGTAAACCTGCGGCGGTACCATCTCGGCGTGCGCGTCAACACCAAAAAATTCAAACGCGATCAGGGAGGTGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGACTCACTGGCCTGCATGAGCGGTCTGCTCAGTCACGGCGaa > 2:772830/1‑150 (MQ=255) ccTGGTAGTACCCCTGGGGCGGTACCAGCGCGGGGTGCGCGGCCCCACCAAACACGGCCACCGCGAGCAGGGGGGGGCTGTAATTTGGTTTGAAACGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGGGGTCTGCGCAGGCACGGCGaa < 2:2787562/150‑1 (MQ=255) cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAg > 2:2304494/1‑150 (MQ=255) gttattaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGCCACCACCAAACACGGCCACCGCGAGCGGGGGGGGGCTGGAAATTCTTTTTAAACGGGTCTTGGGTCGCCTCACTGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAgtt < 2:1774963/145‑1 (MQ=255) agtaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAACCACGGCCAACGCGAGCTGGGCGGGGCTGTAAATTCGTTTGAAAAGGGTCTTGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAgttgtt < 2:3343073/150‑1 (MQ=255) agtaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAACGCGAGCCGGGCGGGGCTGGAAATTCTTTTTAAACGGGTAATGGGTCGCCTCACTGGCCTGCCTGCGCGTTCTGCGCAGGCACGGCGAAgttgtt < 2:4431315/150‑1 (MQ=255) aCCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGt > 2:2797205/1‑150 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGACATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 2:3462516/1‑150 (MQ=255) gcggcgGTACCAGCGGGGCGTGCGGGGCACCACCAAACACGGCCACCGCGAGCAGGGTGGGGGTGTAAATTGTTTTGAAATGGTTCATGGGTCGCCTCACTGGCCTGCCTGGGGGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCa < 2:2651832/150‑1 (MQ=255) gcggcgGAACCAGCGCGGCGTGCCCGCCACAACAAAACACCCCAAACCCCAGCAGGGCGGGGATGAAAATTCTTTTAAAAAGGCTCATGGGACCCAAAACTGCCCCGCCTGCGCGCTCTCCCAAGCCACGGCGAAGTTGTTGCGTTTGCa < 2:905644/150‑1 (MQ=255) gTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCtt > 2:2322716/1‑150 (MQ=255) cAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCt > 1:788308/1‑150 (MQ=255) cgcgGCGTGCGCGGCACCACCAAACACGCCCAACGCGAGCTGGGGGGGGGTGGAAATTCGTTTGAACTGGGTATGGGGGCGCCTCACGGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCg < 1:3731448/150‑1 (MQ=255) gcggcgTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGa > 2:663048/1‑150 (MQ=255) tGCGCGGCCCCACCAAACACGGCCACCGCGAGCCGGGGGGGGCTGTAATTTCTTTTGAAACGGGTCTTGGGTCGCCTCACGGGCCGGCCTGCGCGGTGTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 2:1501144/150‑1 (MQ=255) tGCGCGGCACCACCAAACACGGCAAACGCGAGCAGGGCGGGGCTGTAAATTCTTTTGAACAGGGTCATGGGTCGCCTCACTGGCCGGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 2:3695201/150‑1 (MQ=255) gcgcGGCACCACCAAACAAGGCAAACGCGTGCCGGGGGGGGCTGTAATTTCTTTTTAAAAGGGTCTTGGGTCGCCTCACTGGCCGGCCTGGGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 2:497539/150‑1 (MQ=255) gcgGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGGCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTggg > 1:50820/1‑150 (MQ=255) gCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTTAAAAGGGTCAGGGGTCGCCTAAGTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGc < 2:3755701/150‑1 (MQ=255) caccacCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGGGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGcc > 1:531921/1‑150 (MQ=255) caccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCGTGGCTTCGACCTTCTGGGTGCCGCt > 1:1545808/1‑150 (MQ=255) accaAACCCGCCCACCGCGAGCCGGGGGGGGCTGGAATTTGGTTTTAAACGGGTCATGGGGCGCCCCACGGGCCGGCCGGCGCGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCtt < 2:2442659/150‑1 (MQ=255) ccaAACACGCCCACGGCGCGCGGGGGGGGGGTGCAATTTCTTTTTAAATGGGAGTTGGGTCGCCACCCGGCCGTGCCTGGGGGGTCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCttt < 1:4190996/150‑1 (MQ=255) ccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCttt > 2:4028031/1‑150 (MQ=255) ccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCGTCGACCGTCTGGGTGCCGCttt > 1:746183/1‑150 (MQ=255) aaaCAAGCCAAACGCGAGCCGGGCGGGGCTGTAAATTCTTTTTAAAAGGGTAATGGGTCGCCTCACTGGCCTGCCTGCGCTTTCTGCTCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc < 1:674170/150‑1 (MQ=255) cggCCACGGCGAGCTGGGGGGGGGTGTAATTTGTTTTTAAATGGGTCTTGGGTCGCCTCAGGGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:2553448/149‑1 (MQ=255) cggCCACCGCGCGCCGGGGGGGGGTGTAATTTCTTTTGAAACGGGCCCTGGGTCGCCTCACGGGCGGGCCTGCGGGGGGGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:2162560/149‑1 (MQ=255) cggCCACCGCGAGCTGGGGGGGGCTGTAATTTGTTTTTAACTGGGTATTGGGTCGCCTCAGTGGCCTGCCTGGGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 2:4287782/149‑1 (MQ=255) ggCCACCGCGCGCCGGGGGGGGCTGTATATTCGTTTTAACTGGGTCCTGGGGCGCCTCCCGGGCCGGCGTGCGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGcccc < 2:1224450/150‑1 (MQ=255) gCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTACGGCCCCt > 1:4276181/1‑150 (MQ=255) aaCGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTa > 2:3782199/1‑150 (MQ=255) cgcgAGCTGGGGGGGGCTGGAAATTCGTTTGAAATGGGTCTTGGGTCGCCCCACTGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccccagaagg < 2:3836391/150‑7 (MQ=255) cgcgcgggggggggTTGTAATTTGTTTTCAAATGGGTCTTGGGTCGCCTCAGTGGCCTGCCTGGGGGGTCTGCGCTGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 1:3241886/144‑1 (MQ=255) cgcgccgggcggggcgGTAAATTCGTTTGAAAAGGGTCTGGGGTCGCCTCACTGGCCGGCCGGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 2:2389016/144‑1 (MQ=255) gccggggggggCTGCAATTTCTTTTGAAATGGGTCTTGGGTCGCCTCACTGGCCGGCGGGGGGGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGaa < 2:2413359/147‑1 (MQ=255) ggggggggTTGTAATTTCGTTTGAAAGGGGTCTTGGGCCGCCCCCCGGCCGGGCCTGGGGGGTCGGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgc < 1:264750/150‑1 (MQ=255) ggggggTTGGAAATTCTTTTGAAATGGTTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:1845893/148‑1 (MQ=255) ggggggGTGTAATTTCGTTTGAAAGGGGTCTGGGGGGGCCGCTGGGGCGGGCGGGGGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 1:4307726/148‑1 (MQ=255) ggggggGTGGATATTCGTTTTAAAAGGGTCTTGGGTCGCCTCCCTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:1977590/148‑1 (MQ=255) ggggggCTGTAATTTGGTTTGAAACGGGCCATGGGCCGCCCCCCGGGCCGGCGTGCGCGGTCGCCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:116532/148‑1 (MQ=255) ggggCTGCAATTTTTTTTTAAATGGGCCTGGGGCCGCCCCCCGGGCCGGCGGGGGCGGGCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGc < 1:1235621/150‑1 (MQ=255) cTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAACTTGTTGCGTTTGCAGAGCTTTGCTTAGACCATCATGGTGCCGCATTACGGCCCCAGTACCTACAACCCGAGCAGgc > 1:1919273/1‑150 (MQ=255) ttaatttCGTTTGAAACGGGACATGGGTCGCCTACCTGGCCTGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGgcgc < 2:2279695/145‑1 (MQ=255) gAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgct > 2:3135051/1‑150 (MQ=255) ttCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggct > 2:3288324/1‑150 (MQ=255) gttttCAAACGGGTCTGGGGCCGCCTCCGGGGCCGGCGGGCGGGGTGGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGctggctgg < 1:38743/148‑1 (MQ=255) cGTTTGAAACGGGTCATGGGGCGCCTCCCGGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGctggctgg < 2:662068/150‑1 (MQ=255) gTTTGAAACGGGACTGGGGTCGCCTCCCGGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTGGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAATGCGAGCAGGCGCtggctggc < 2:2509690/150‑1 (MQ=255) tttGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc > 2:4055926/1‑150 (MQ=255) tGAAACGGGTCTTGGGTCGCCCCCCGGGCCTGCCTGCGGGGGCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCa < 1:2713457/150‑1 (MQ=255) aaaaGGGTCATGGGTCGCCTCACTGGCCTGCCTTCGCGGTCAGCGCACGCACCGCGAAGTTGTTTCGTTTGCAGAGATTGGCTTAGACCTTCTGGGTGCCGCTTTACGGCCCCAGTACCACGAAAGCGAGCACGCGCAGGCTGGCCCAGt > 1:2367961/1‑150 (MQ=255) aatgggTCTGGGGGCGCCTCCGGGGCCGGCCGGCGGGGCGGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTc < 1:1919742/147‑1 (MQ=255) ggggctggggTCGCCTCACGGGCCTGGGGGGGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 1:3462516/143‑1 (MQ=255) gggTCTGGGGGCGCCTCCGGGGCCGGCCGGGGGGGGCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 1:2489953/150‑1 (MQ=255) gTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt > 1:1017238/1‑150 (MQ=255) gTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt > 1:1017259/1‑150 (MQ=255) ggggTCGCCTCCCGGGCCTGCCTGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCGTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTc < 2:2101685/149‑1 (MQ=255) ggTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgc < 1:1830361/150‑1 (MQ=255) ggTCGCCTCACTGGCCTGCCGGCGCGGACTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgc < 2:4237929/150‑1 (MQ=255) tCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCgcgc > 2:2752921/1‑150 (MQ=255) acTCACTGGCCTGCCTTAGCGGTCTTCGCAGGCACTGCGAAGTTGAATCGTTTGCAGAGCTTGTCATCTACCTTCTTGGTGCCCCTTTACGCCCCCTGTACCTCGAACGAGAGCAGGCGCATGCTGGCCCAGTCCTCGTCTTCGCGCaac > 2:1759557/2‑148 (MQ=255) cTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCACGAAAGCGAGCAGGCGCTGGCTGGCCCAGTCCACGTCTTAGCGCAtag > 1:2064454/1‑148 (MQ=255) agtGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGa < 2:4358627/148‑1 (MQ=255) aCTGGCCGGCCTGCGCGTTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGa < 2:1981439/150‑1 (MQ=255) cTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 2:1845961/150‑1 (MQ=255) tGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAg > 2:3543571/1‑150 (MQ=255) gccgtgcctgcGCAGACCGCGCAGGCA‑GGCGAAGTTGTTGCGTTTGCAGAGCGTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCAGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCACCGCTTCGCGCATATGGAAGAc > 2:3318436/5‑150 (MQ=255) gtgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 2:1022122/2‑150 (MQ=255) tgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGaa > 2:1190253/1‑150 (MQ=255) tgcctgcGCAGACCGCGCAGGCAGGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGaa > 2:1402435/1‑150 (MQ=255) cctgcGCAGACCGCGCAGGCAGGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGc > 2:3024454/1‑150 (MQ=255) cctgcGCAGACCGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAg > 2:3083619/1‑143 (MQ=255) cctgcGCAGACCGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAg < 1:3083619/143‑1 (MQ=255) ctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCg > 2:1358522/1‑150 (MQ=255) ggTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTc < 1:2781197/150‑1 (MQ=255) | TCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGG > NC_002947/1464056‑1464354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |